RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 WDR66Q8TBY9 1149 aa25.32■■□□□ 1.64
PTPN18-208ENST00000462996 ATRNL1Q5VV63 1379 aa25.31■■□□□ 1.64
PTPN18-208ENST00000462996 CAPN2P17655 700 aa25.31■■□□□ 1.64
PTPN18-208ENST00000462996 MNX1P50219 401 aaPredicted RBP25.31■■□□□ 1.64
PTPN18-208ENST00000462996 PUM3Q15397 648 aaKnown RBP25.31■■□□□ 1.64
PTPN18-208ENST00000462996 DIS3LQ8TF46 1054 aaKnown RBP25.31■■□□□ 1.64
PTPN18-208ENST00000462996 GDF15Q99988 308 aa25.31■■□□□ 1.64
PTPN18-208ENST00000462996 AFG3L2Q9Y4W6 797 aa25.31■■□□□ 1.64
PTPN18-208ENST00000462996 PTPRFP10586 1907 aa25.3■■□□□ 1.64
PTPN18-208ENST00000462996 TNPO2O14787 897 aaKnown RBP25.3■■□□□ 1.64
PTPN18-208ENST00000462996 PTPRAP18433 802 aa25.3■■□□□ 1.64
PTPN18-208ENST00000462996 PRDX5P30044 214 aa25.3■■□□□ 1.64
PTPN18-208ENST00000462996 GADL1Q6ZQY3 521 aa25.3■■□□□ 1.64
PTPN18-208ENST00000462996 SCYL3Q8IZE3 742 aa25.3■■□□□ 1.64
PTPN18-208ENST00000462996 USP40Q9NVE5 1235 aa25.3■■□□□ 1.64
PTPN18-208ENST00000462996 BMP8BP34820 402 aa25.29■■□□□ 1.64
PTPN18-208ENST00000462996 SLC45A1Q9Y2W3 748 aa25.29■■□□□ 1.64
PTPN18-208ENST00000462996 NECAB2Q7Z6G3 386 aa25.28■■□□□ 1.64
PTPN18-208ENST00000462996 SLURP2P0DP57 97 aa25.27■■□□□ 1.64
PTPN18-208ENST00000462996 ZEB1P37275 1124 aaPredicted RBP25.27■■□□□ 1.64
PTPN18-208ENST00000462996 PICK1Q9NRD5 415 aa25.27■■□□□ 1.64
PTPN18-208ENST00000462996 TAOK2Q9UL54 1235 aa25.27■■□□□ 1.64
PTPN18-208ENST00000462996 PHIPQ8WWQ0 1821 aa25.27■■□□□ 1.64
PTPN18-208ENST00000462996 DOCK2Q92608 1830 aa25.27■■□□□ 1.64
PTPN18-208ENST00000462996 GPR153Q6NV75 609 aa25.26■■□□□ 1.63
PTPN18-208ENST00000462996 Q7L0L9 218 aa25.26■■□□□ 1.63
PTPN18-208ENST00000462996 C7orf61Q8IZ16 206 aa25.26■■□□□ 1.63
PTPN18-208ENST00000462996 DEFB123Q8N688 67 aa25.26■■□□□ 1.63
PTPN18-208ENST00000462996 SLC5A1P13866 664 aa25.25■■□□□ 1.63
PTPN18-208ENST00000462996 RGS3P49796 1198 aa25.25■■□□□ 1.63
PTPN18-208ENST00000462996 MAP3K10Q02779 954 aa25.25■■□□□ 1.63
PTPN18-208ENST00000462996 SH3BP5LQ7L8J4 393 aa25.25■■□□□ 1.63
PTPN18-208ENST00000462996 SMCR8Q8TEV9 937 aaPredicted RBP25.25■■□□□ 1.63
PTPN18-208ENST00000462996 LPIN2Q92539 896 aa25.25■■□□□ 1.63
PTPN18-208ENST00000462996 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.25■■□□□ 1.63
PTPN18-208ENST00000462996 ZMYND8Q9ULU4 1186 aaPredicted RBP25.25■■□□□ 1.63
PTPN18-208ENST00000462996 LDHBP07195 334 aaKnown RBP25.24■■□□□ 1.63
PTPN18-208ENST00000462996 ANKRD13CQ8N6S4 541 aa25.24■■□□□ 1.63
PTPN18-208ENST00000462996 COA7Q96BR5 231 aa25.24■■□□□ 1.63
PTPN18-208ENST00000462996 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.24■■□□□ 1.63
PTPN18-208ENST00000462996 LAMA2P24043 3122 aaKnown RBP25.23■■□□□ 1.63
PTPN18-208ENST00000462996 IDI2Q9BXS1 227 aa25.23■■□□□ 1.63
PTPN18-208ENST00000462996 MYH2Q9UKX2 1941 aa25.22■■□□□ 1.63
PTPN18-208ENST00000462996 TRIM75PA6NK02 468 aa25.22■■□□□ 1.63
PTPN18-208ENST00000462996 EYA2O00167 538 aa25.22■■□□□ 1.63
PTPN18-208ENST00000462996 RFX5P48382 616 aaPredicted RBP25.22■■□□□ 1.63
PTPN18-208ENST00000462996 CCDC84Q86UT8 332 aaPredicted RBP25.22■■□□□ 1.63
PTPN18-208ENST00000462996 AGTPBP1Q9UPW5 1226 aa25.22■■□□□ 1.63
PTPN18-208ENST00000462996 DOCK1Q14185 1865 aa25.21■■□□□ 1.63
PTPN18-208ENST00000462996 DDTLA6NHG4 134 aaPredicted RBP25.21■■□□□ 1.63
PTPN18-208ENST00000462996 ENTPD3O75355 529 aa25.21■■□□□ 1.63
PTPN18-208ENST00000462996 LRIT3Q3SXY7 679 aa25.21■■□□□ 1.63
PTPN18-208ENST00000462996 TREML2Q5T2D2 321 aa25.21■■□□□ 1.63
PTPN18-208ENST00000462996 ATG9AQ7Z3C6 839 aa25.21■■□□□ 1.63
PTPN18-208ENST00000462996 ANKLE1Q8NAG6 615 aa25.21■■□□□ 1.63
PTPN18-208ENST00000462996 STXBP5LQ9Y2K9 1186 aa25.21■■□□□ 1.63
PTPN18-208ENST00000462996 LRRFIP2Q9Y608 721 aaKnown RBP25.21■■□□□ 1.63
PTPN18-208ENST00000462996 CTNND1O60716 968 aaKnown RBP25.2■■□□□ 1.62
PTPN18-208ENST00000462996 SYN1P17600 705 aa25.2■■□□□ 1.62
PTPN18-208ENST00000462996 ZSCAN29Q8IWY8 852 aaPredicted RBP25.2■■□□□ 1.62
PTPN18-208ENST00000462996 USP44Q9H0E7 712 aa25.2■■□□□ 1.62
PTPN18-208ENST00000462996 MTMR10Q9NXD2 777 aa25.2■■□□□ 1.62
PTPN18-208ENST00000462996 RFX7Q2KHR2 1363 aa25.19■■□□□ 1.62
PTPN18-208ENST00000462996 SALL1Q9NSC2 1324 aa25.19■■□□□ 1.62
PTPN18-208ENST00000462996 MAGEA10P43363 369 aaPredicted RBP25.19■■□□□ 1.62
PTPN18-208ENST00000462996 TRIM32Q13049 653 aa25.19■■□□□ 1.62
PTPN18-208ENST00000462996 FAM110CQ1W6H9 321 aa25.19■■□□□ 1.62
PTPN18-208ENST00000462996 HMGCRP04035 888 aa25.18■■□□□ 1.62
PTPN18-208ENST00000462996 NBPF3Q9H094 633 aa25.18■■□□□ 1.62
PTPN18-208ENST00000462996 DDX4Q9NQI0 724 aaKnown RBP25.18■■□□□ 1.62
PTPN18-208ENST00000462996 GJD2Q9UKL4 321 aa25.18■■□□□ 1.62
PTPN18-208ENST00000462996 DDX60LQ5H9U9 1706 aaKnown RBP25.17■■□□□ 1.62
PTPN18-208ENST00000462996 GAKO14976 1311 aa25.17■■□□□ 1.62
PTPN18-208ENST00000462996 DNAH12Q6ZR08 3092 aa25.16■■□□□ 1.62
PTPN18-208ENST00000462996 RPTORQ8N122 1335 aa25.16■■□□□ 1.62
PTPN18-208ENST00000462996 PHKA1P46020 1223 aa25.16■■□□□ 1.62
PTPN18-208ENST00000462996 TDHQ8IZJ6 230 aa25.16■■□□□ 1.62
PTPN18-208ENST00000462996 MRPL50Q8N5N7 158 aaKnown RBP25.16■■□□□ 1.62
PTPN18-208ENST00000462996 HMX1Q9NP08 348 aaPredicted RBP25.16■■□□□ 1.62
PTPN18-208ENST00000462996 GNL3LQ9NVN8 582 aaKnown RBP25.16■■□□□ 1.62
PTPN18-208ENST00000462996 ATP2B3Q16720 1220 aa25.15■■□□□ 1.62
PTPN18-208ENST00000462996 C11orf49Q9H6J7 331 aa25.15■■□□□ 1.62
PTPN18-208ENST00000462996 PNMA3Q9UL41 463 aa25.15■■□□□ 1.62
PTPN18-208ENST00000462996 DENND2AQ9ULE3 1009 aa25.15■■□□□ 1.62
PTPN18-208ENST00000462996 PLXNB2O15031 1838 aa25.14■■□□□ 1.62
PTPN18-208ENST00000462996 PICALMQ13492 652 aa25.13■■□□□ 1.61
PTPN18-208ENST00000462996 PROCA1Q8NCQ7 364 aaPredicted RBP25.13■■□□□ 1.61
PTPN18-208ENST00000462996 MRS2Q9HD23 443 aa25.13■■□□□ 1.61
PTPN18-208ENST00000462996 OGDHLQ9ULD0 1010 aa25.13■■□□□ 1.61
PTPN18-208ENST00000462996 EYSQ5T1H1 3165 aa25.12■■□□□ 1.61
PTPN18-208ENST00000462996 VCANP13611 3396 aa25.12■■□□□ 1.61
PTPN18-208ENST00000462996 SEMA3EO15041 775 aa25.12■■□□□ 1.61
PTPN18-208ENST00000462996 GCLCP48506 637 aaPredicted RBP25.12■■□□□ 1.61
PTPN18-208ENST00000462996 SPP2Q13103 211 aa25.12■■□□□ 1.61
PTPN18-208ENST00000462996 COL25A1Q9BXS0 654 aaPredicted RBP25.12■■□□□ 1.61
PTPN18-208ENST00000462996 UBE2OQ9C0C9 1292 aaKnown RBP25.12■■□□□ 1.61
PTPN18-208ENST00000462996 SIL1Q9H173 461 aa25.12■■□□□ 1.61
PTPN18-208ENST00000462996 LOC285556D6RIA3 1793 aa25.12■■□□□ 1.61
PTPN18-208ENST00000462996 FAM196BA6NMK8 535 aa25.11■■□□□ 1.61
PTPN18-208ENST00000462996 TRIB2Q92519 343 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms