RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RPAP1Q9BWH6 1393 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-221ENST00000462352 FLT1P17948 1338 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 HIP1O00291 1037 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 GPAA1O43292 621 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 PRKAB2O43741 272 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 USP5P45974 858 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 C1QTNF8P60827 252 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 NBPF12Q5TAG4 269 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-221ENST00000462352 SH3BP5LQ7L8J4 393 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 STRBPQ96SI9 672 aaKnown RBP14.18□□□□□ -0.14
CPNE1-221ENST00000462352 ZNF408Q9H9D4 720 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 DIAPH3Q9NSV4 1193 aa14.18□□□□□ -0.14
CPNE1-221ENST00000462352 CDK5RAP2Q96SN8 1893 aa14.17□□□□□ -0.14
CPNE1-221ENST00000462352 DDTLA6NHG4 134 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-221ENST00000462352 CELF2O95319 508 aaKnown RBP14.17□□□□□ -0.14
CPNE1-221ENST00000462352 SUPT20HL1Q3ZLR7 823 aa14.17□□□□□ -0.14
CPNE1-221ENST00000462352 MCMDC2Q4G0Z9 681 aa14.17□□□□□ -0.14
CPNE1-221ENST00000462352 CST9Q5W186 159 aa14.17□□□□□ -0.14
CPNE1-221ENST00000462352 CWC27Q6UX04 472 aaKnown RBP14.17□□□□□ -0.14
CPNE1-221ENST00000462352 SDR42E1Q8WUS8 393 aa14.17□□□□□ -0.14
CPNE1-221ENST00000462352 SLC4A4Q9Y6R1 1079 aa14.17□□□□□ -0.14
CPNE1-221ENST00000462352 COL2A1P02458 1487 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-221ENST00000462352 SSC5DA1L4H1 1573 aa14.17□□□□□ -0.14
CPNE1-221ENST00000462352 FOCADQ5VW36 1801 aa14.16□□□□□ -0.14
CPNE1-221ENST00000462352 GNAT2P19087 354 aa14.16□□□□□ -0.14
CPNE1-221ENST00000462352 NF2P35240 595 aa14.16□□□□□ -0.14
CPNE1-221ENST00000462352 APLP1P51693 650 aa14.16□□□□□ -0.14
CPNE1-221ENST00000462352 CCDC129Q6ZRS4 1044 aa14.16□□□□□ -0.14
CPNE1-221ENST00000462352 ZSCAN29Q8IWY8 852 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-221ENST00000462352 DCP1AQ9NPI6 582 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-221ENST00000462352 MKRN1Q9UHC7 482 aaKnown RBP14.16□□□□□ -0.14
CPNE1-221ENST00000462352 ATRNL1Q5VV63 1379 aa14.16□□□□□ -0.14
CPNE1-221ENST00000462352 CHMLP26374 656 aa14.15□□□□□ -0.14
CPNE1-221ENST00000462352 ZNF589Q86UQ0 364 aaPredicted RBP14.15□□□□□ -0.14
CPNE1-221ENST00000462352 CSRNP1Q96S65 589 aa14.15□□□□□ -0.14
CPNE1-221ENST00000462352 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
CPNE1-221ENST00000462352 ATP8A2Q9NTI2 1148 aa14.15□□□□□ -0.14
CPNE1-221ENST00000462352 SAP30BPQ9UHR5 308 aaKnown RBP14.15□□□□□ -0.14
CPNE1-221ENST00000462352 TRPM7Q96QT4 1865 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 TMEM88BA6NKF7 163 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 GSG1L2A8MUP6 293 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 PATL2C9JE40 543 aaKnown RBP14.14□□□□□ -0.15
CPNE1-221ENST00000462352 PRKG1Q13976 671 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 HOOK2Q96ED9 719 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 GBA2Q9HCG7 927 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-221ENST00000462352 MCM9Q9NXL9 1143 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 PALD1Q9ULE6 856 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 FZD1Q9UP38 647 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 CCDC171Q6TFL3 1326 aa14.14□□□□□ -0.15
CPNE1-221ENST00000462352 DDX60LQ5H9U9 1706 aaKnown RBP14.13□□□□□ -0.15
CPNE1-221ENST00000462352 NAV1Q8NEY1 1877 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 FKBP1BP68106 108 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 SLC4A8Q2Y0W8 1093 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 VPS53Q5VIR6 699 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 MOB2Q70IA6 237 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 C2orf69Q8N8R5 385 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 IL25Q9H293 177 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 EPB41L4AQ9HCS5 686 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-221ENST00000462352 RAD50Q92878 1312 aa14.13□□□□□ -0.15
CPNE1-221ENST00000462352 FOXP2O15409 715 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 PPP1R12BO60237 982 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-221ENST00000462352 USP2O75604 605 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-221ENST00000462352 APPP05067 770 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 HLA-DOAP06340 250 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 SLURP2P0DP57 97 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 MFAP1P55081 439 aaKnown RBP14.12□□□□□ -0.15
CPNE1-221ENST00000462352 TTLL12Q14166 644 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-221ENST00000462352 DCAF15Q66K64 600 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 GIMAP6Q6P9H5 292 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 TTC6Q86TZ1 520 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 IFNL3Q8IZI9 196 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 RUFY2Q8WXA3 655 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 PI4KBQ9UBF8 816 aa14.12□□□□□ -0.15
CPNE1-221ENST00000462352 ANGEL1Q9UNK9 670 aaKnown RBP14.12□□□□□ -0.15
CPNE1-221ENST00000462352 PAPPA2Q9BXP8 1791 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 MYH1P12882 1939 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 USP17L12C9JPN9 530 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 USP17L21D6R901 530 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 CDC45O75419 566 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 POLR3DP05423 398 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-221ENST00000462352 CYP2D6P10635 497 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 HSPD1P10809 573 aaKnown RBP14.11□□□□□ -0.15
CPNE1-221ENST00000462352 HSPA6P17066 643 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 TDO2P48775 406 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 PLCD1P51178 756 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 MAP3K10Q02779 954 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 MAP3K11Q16584 847 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 CTR9Q6PD62 1173 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 ARMC9Q7Z3E5 817 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 ZNF341Q9BYN7 854 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 NACAP1Q9BZK3 213 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 ARPP21Q9UBL0 812 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-221ENST00000462352 TLL2Q9Y6L7 1015 aa14.11□□□□□ -0.15
CPNE1-221ENST00000462352 FAM196BA6NMK8 535 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 UBE2Q2LH0YL09 131 aa14.1□□□□□ -0.15
CPNE1-221ENST00000462352 SGSM2O43147 1006 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms