RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 DHX32Q7L7V1 743 aaKnown RBP23.56■■□□□ 1.36
PTPN18-207ENST00000462321 RALYLQ86SE5 291 aaKnown RBP23.56■■□□□ 1.36
PTPN18-207ENST00000462321 OGFOD1Q8N543 542 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 RNF41Q9H4P4 317 aaPredicted RBP23.56■■□□□ 1.36
PTPN18-207ENST00000462321 USP40Q9NVE5 1235 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 MCM9Q9NXL9 1143 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 RPS12P25398 132 aaKnown RBP23.56■■□□□ 1.36
PTPN18-207ENST00000462321 MMP14P50281 582 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 AK2P54819 239 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 CTDSPL2Q05D32 466 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 CFAP100Q494V2 611 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 MAPKAPK5Q8IW41 473 aa23.56■■□□□ 1.36
PTPN18-207ENST00000462321 USP17L8P0C7I0 530 aa23.55■■□□□ 1.36
PTPN18-207ENST00000462321 SLC4A3P48751 1232 aa23.55■■□□□ 1.36
PTPN18-207ENST00000462321 AMOTL1Q8IY63 956 aa23.55■■□□□ 1.36
PTPN18-207ENST00000462321 CNNM2Q9H8M5 875 aa23.55■■□□□ 1.36
PTPN18-207ENST00000462321 NAV1Q8NEY1 1877 aa23.54■■□□□ 1.36
PTPN18-207ENST00000462321 WDHD1O75717 1129 aaPredicted RBP23.54■■□□□ 1.36
PTPN18-207ENST00000462321 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
PTPN18-207ENST00000462321 MFSD6Q6ZSS7 791 aa23.54■■□□□ 1.36
PTPN18-207ENST00000462321 MB21D2Q8IYB1 491 aaPredicted RBP23.54■■□□□ 1.36
PTPN18-207ENST00000462321 PCDHAC2Q9Y5I4 1007 aa23.54■■□□□ 1.36
PTPN18-207ENST00000462321 DDX60LQ5H9U9 1706 aaKnown RBP23.54■■□□□ 1.36
PTPN18-207ENST00000462321 LAMB1P07942 1786 aa23.54■■□□□ 1.36
PTPN18-207ENST00000462321 NEDD4P46934 1319 aa23.53■■□□□ 1.36
PTPN18-207ENST00000462321 CYP2D7A0A087X1C5 515 aa23.53■■□□□ 1.36
PTPN18-207ENST00000462321 EXOSC10Q01780 885 aaKnown RBP23.53■■□□□ 1.36
PTPN18-207ENST00000462321 ANKRD1Q15327 319 aa23.53■■□□□ 1.36
PTPN18-207ENST00000462321 WDR19Q8NEZ3 1342 aa23.53■■□□□ 1.36
PTPN18-207ENST00000462321 C12orf60Q5U649 245 aa23.53■■□□□ 1.36
PTPN18-207ENST00000462321 KRT23Q9C075 422 aa23.53■■□□□ 1.36
PTPN18-207ENST00000462321 BAZ2AQ9UIF9 1905 aaKnown RBP23.52■■□□□ 1.36
PTPN18-207ENST00000462321 ROBO3Q96MS0 1386 aa23.52■■□□□ 1.36
PTPN18-207ENST00000462321 SLC3A2P08195 630 aaKnown RBP23.52■■□□□ 1.36
PTPN18-207ENST00000462321 MCM5P33992 734 aa23.52■■□□□ 1.36
PTPN18-207ENST00000462321 MTMR14Q8NCE2 650 aa23.52■■□□□ 1.36
PTPN18-207ENST00000462321 TCEANC2Q96MN5 208 aa23.52■■□□□ 1.36
PTPN18-207ENST00000462321 TACC3Q9Y6A5 838 aa23.52■■□□□ 1.36
PTPN18-207ENST00000462321 CDK5RAP2Q96SN8 1893 aa23.52■■□□□ 1.36
PTPN18-207ENST00000462321 FOCADQ5VW36 1801 aa23.52■■□□□ 1.36
PTPN18-207ENST00000462321 ZNF541Q9H0D2 1346 aa23.51■■□□□ 1.35
PTPN18-207ENST00000462321 SPDYE2BA6NHP3 402 aa23.51■■□□□ 1.35
PTPN18-207ENST00000462321 FGRP09769 529 aa23.51■■□□□ 1.35
PTPN18-207ENST00000462321 SPDYE6P0CI01 402 aa23.51■■□□□ 1.35
PTPN18-207ENST00000462321 CYP2D6P10635 497 aa23.51■■□□□ 1.35
PTPN18-207ENST00000462321 IDI2Q9BXS1 227 aa23.51■■□□□ 1.35
PTPN18-207ENST00000462321 SRCAPQ6ZRS2 3230 aa23.51■■□□□ 1.35
PTPN18-207ENST00000462321 NPM3O75607 178 aaKnown RBP23.5■■□□□ 1.35
PTPN18-207ENST00000462321 DLGAP5Q15398 846 aa23.5■■□□□ 1.35
PTPN18-207ENST00000462321 DPF2Q92785 391 aa23.5■■□□□ 1.35
PTPN18-207ENST00000462321 DDX4Q9NQI0 724 aaKnown RBP23.5■■□□□ 1.35
PTPN18-207ENST00000462321 LIMCH1Q9UPQ0 1083 aa23.5■■□□□ 1.35
PTPN18-207ENST00000462321 DICER1Q9UPY3 1922 aaKnown RBP23.5■■□□□ 1.35
PTPN18-207ENST00000462321 B4E1Z4 1266 aa23.5■■□□□ 1.35
PTPN18-207ENST00000462321 POLR3DP05423 398 aaPredicted RBP23.5■■□□□ 1.35
PTPN18-207ENST00000462321 PICALMQ13492 652 aa23.5■■□□□ 1.35
PTPN18-207ENST00000462321 TOB2Q14106 344 aaPredicted RBP23.5■■□□□ 1.35
PTPN18-207ENST00000462321 Q6ZUG5 572 aa23.5■■□□□ 1.35
PTPN18-207ENST00000462321 NOL8Q76FK4 1167 aaKnown RBP23.5■■□□□ 1.35
PTPN18-207ENST00000462321 FBXL16Q8N461 479 aa23.5■■□□□ 1.35
PTPN18-207ENST00000462321 TMX3Q96JJ7 454 aa23.5■■□□□ 1.35
PTPN18-207ENST00000462321 SAP30BPQ9UHR5 308 aaKnown RBP23.5■■□□□ 1.35
PTPN18-207ENST00000462321 SMIM22K7EJ46 135 aa23.49■■□□□ 1.35
PTPN18-207ENST00000462321 PRC1O43663 620 aa23.49■■□□□ 1.35
PTPN18-207ENST00000462321 ZNF280AP59817 542 aaPredicted RBP23.49■■□□□ 1.35
PTPN18-207ENST00000462321 PRMT6Q96LA8 375 aaPredicted RBP23.49■■□□□ 1.35
PTPN18-207ENST00000462321 AGXT2Q9BYV1 514 aa23.49■■□□□ 1.35
PTPN18-207ENST00000462321 OSBPL5Q9H0X9 879 aaPredicted RBP23.49■■□□□ 1.35
PTPN18-207ENST00000462321 INCENPQ9NQS7 918 aa23.49■■□□□ 1.35
PTPN18-207ENST00000462321 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.49■■□□□ 1.35
PTPN18-207ENST00000462321 GJA3Q9Y6H8 435 aa23.49■■□□□ 1.35
PTPN18-207ENST00000462321 NT5C2P49902 561 aa23.48■■□□□ 1.35
PTPN18-207ENST00000462321 GMPSP49915 693 aaPredicted RBP23.48■■□□□ 1.35
PTPN18-207ENST00000462321 ANTXR2P58335 489 aa23.48■■□□□ 1.35
PTPN18-207ENST00000462321 EVX2Q03828 476 aa23.48■■□□□ 1.35
PTPN18-207ENST00000462321 NFIAQ12857 509 aa23.48■■□□□ 1.35
PTPN18-207ENST00000462321 ORC4O43929 436 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 FGD1P98174 961 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 PDE4BQ07343 736 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 ZBED3Q96IU2 234 aaPredicted RBP23.47■■□□□ 1.35
PTPN18-207ENST00000462321 TDRD3Q9H7E2 651 aaKnown RBP23.47■■□□□ 1.35
PTPN18-207ENST00000462321 TOMM22Q9NS69 142 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 RNF181Q9P0P0 153 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 ECM29Q5VYK3 1845 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 SBF1O95248 1867 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 KDM4AO75164 1064 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 GPR162Q16538 588 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 RRP12Q5JTH9 1297 aaKnown RBP23.47■■□□□ 1.35
PTPN18-207ENST00000462321 CYB5R4Q7L1T6 521 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 CHST3Q7LGC8 479 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 STK11IPQ8N1F8 1099 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 ESR2Q92731 530 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 ZSCAN31Q96LW9 406 aaPredicted RBP23.47■■□□□ 1.35
PTPN18-207ENST00000462321 LRRC2Q9BYS8 371 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 MYOZ2Q9NPC6 264 aa23.47■■□□□ 1.35
PTPN18-207ENST00000462321 PLCD1P51178 756 aa23.46■■□□□ 1.35
PTPN18-207ENST00000462321 SLC4A8Q2Y0W8 1093 aa23.46■■□□□ 1.35
PTPN18-207ENST00000462321 TTC6Q86TZ1 520 aa23.46■■□□□ 1.35
PTPN18-207ENST00000462321 GPC2Q8N158 579 aa23.46■■□□□ 1.35
PTPN18-207ENST00000462321 NKX2-3Q8TAU0 364 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms