RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 THUMPD2Q9BTF0 503 aaKnown RBP9.13□□□□□ -0.95
TRAPPC10-205ENST00000461889 PBX4Q9BYU1 374 aa9.13□□□□□ -0.95
TRAPPC10-205ENST00000461889 TMEM39BQ9GZU3 492 aa9.13□□□□□ -0.95
TRAPPC10-205ENST00000461889 XRCC5P13010 732 aaKnown RBP9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 POU3F3P20264 500 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 TNNI2P48788 182 aa9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 CCT4P50991 539 aaKnown RBP9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 ATN1P54259 1190 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 PNISRQ8TF01 805 aaKnown RBP9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 HOOK2Q96ED9 719 aa9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 ISCA1Q9BUE6 129 aa9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 PDLIM7Q9NR12 457 aa9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 CFAP47Q6ZTR5 3102 aa9.12□□□□□ -0.95
TRAPPC10-205ENST00000461889 TRIM43BA6NCK2 446 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 HSP90B1P14625 803 aaKnown RBP9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 PTPN5P54829 565 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 KCTD2Q14681 263 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 SNX17Q15036 470 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 FAM110CQ1W6H9 321 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 FASTKD5Q7L8L6 764 aaKnown RBP9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 ANKRD18AQ8IVF6 992 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 TRMT44Q8IYL2 757 aaKnown RBP9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 TRIM43Q96BQ3 446 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 MIS18AQ9NYP9 233 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 ATP11BQ9Y2G3 1177 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 LEMD3Q9Y2U8 911 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 RLFQ13129 1914 aa9.11□□□□□ -0.95
TRAPPC10-205ENST00000461889 RIF1Q5UIP0 2472 aaKnown RBP9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 DNM1LO00429 736 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 PBX2P40425 430 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 CACNB2Q08289 660 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 TRIM28Q13263 835 aaKnown RBP9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 PROSER3Q2NL68 480 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 CCDC152Q4G0S7 254 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 C1orf53Q5VUE5 145 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 SLC39A5Q6ZMH5 540 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 MFSD14AQ96MC6 490 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 PRRX2Q99811 253 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 TDRD3Q9H7E2 651 aaKnown RBP9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 PRDM5Q9NQX1 630 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 IGSF5Q9NSI5 407 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 MINPP1Q9UNW1 487 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 PLXNA1Q9UIW2 1896 aa9.1□□□□□ -0.95
TRAPPC10-205ENST00000461889 ANKRD11Q6UB99 2663 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 CACNA1HO95180 2353 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 POTEB3A0JP26 581 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 F8W031 263 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 RBM5P52756 815 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 SKIV2LQ15477 1246 aaKnown RBP9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 RASIP1Q5U651 963 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 DCAF15Q66K64 600 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 POTEBQ6S5H4 581 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 SH3RF1Q7Z6J0 888 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 GJD3Q8N144 294 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 ANKRD13CQ8N6S4 541 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 PRSS33Q8NF86 280 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 SMCR8Q8TEV9 937 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 PANK3Q9H999 370 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 CD209Q9NNX6 404 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 BSDC1Q9NW68 430 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 ZNF112Q9UJU3 913 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 PLXNB2O15031 1838 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 AK9Q5TCS8 1911 aa9.09□□□□□ -0.95
TRAPPC10-205ENST00000461889 FRMPD3Q5JV73 1810 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 ACACBO00763 2458 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 A0A0G2JLL6 359 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 TCP10L2B9ZVM9 353 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 CCND3P30281 292 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 INPP5BP32019 993 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 DCTN1Q14203 1278 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 RAB30Q15771 203 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 NOL9Q5SY16 702 aaKnown RBP9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 PRRT2Q7Z6L0 340 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 XAGE3Q8WTP9 111 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 LPAR1Q92633 364 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 HLA-CQ95604 372 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 ZNF341Q9BYN7 854 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 SERPINA10Q9UK55 444 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 TACC3Q9Y6A5 838 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 FAM186AA6NE01 2351 aa9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 PRRC2BQ5JSZ5 2229 aaKnown RBP9.08□□□□□ -0.96
TRAPPC10-205ENST00000461889 KIAA0355O15063 1070 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 MSCO60682 206 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 ID4P47928 161 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 FPGSQ05932 587 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 COL9A2Q14055 689 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 TRIM60Q495X7 471 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 CCDC129Q6ZRS4 1044 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 FAM178BQ8IXR5 827 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 DZIP1LQ8IYY4 767 aaKnown RBP9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 MSRAQ9UJ68 235 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 NCOR2Q9Y618 2525 aa9.07□□□□□ -0.96
TRAPPC10-205ENST00000461889 MYBBP1AQ9BQG0 1328 aaKnown RBP9.06□□□□□ -0.96
TRAPPC10-205ENST00000461889 U2SURPO15042 1029 aaKnown RBP9.06□□□□□ -0.96
TRAPPC10-205ENST00000461889 DCXO43602 365 aa9.06□□□□□ -0.96
TRAPPC10-205ENST00000461889 ANXA1P04083 346 aa9.06□□□□□ -0.96
TRAPPC10-205ENST00000461889 CYP2B6P20813 491 aa9.06□□□□□ -0.96
TRAPPC10-205ENST00000461889 PRKAR2BP31323 418 aa9.06□□□□□ -0.96
TRAPPC10-205ENST00000461889 EIF4G2P78344 907 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms