RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 NOL9Q5SY16 702 aaKnown RBP23.28■■□□□ 1.32
VARS-220ENST00000461874 SH3BP5LQ7L8J4 393 aa23.28■■□□□ 1.32
VARS-220ENST00000461874 TAF1CQ15572 869 aaPredicted RBP23.27■■□□□ 1.32
VARS-220ENST00000461874 ZSCAN29Q8IWY8 852 aaPredicted RBP23.27■■□□□ 1.32
VARS-220ENST00000461874 ERO1AQ96HE7 468 aa23.27■■□□□ 1.32
VARS-220ENST00000461874 ZFYVE28Q9HCC9 887 aa23.27■■□□□ 1.32
VARS-220ENST00000461874 SNRKQ9NRH2 765 aa23.27■■□□□ 1.32
VARS-220ENST00000461874 LRP2BPQ9P2M1 347 aa23.27■■□□□ 1.32
VARS-220ENST00000461874 DDTLA6NHG4 134 aaPredicted RBP23.26■■□□□ 1.31
VARS-220ENST00000461874 PHF20L1A8MW92 1017 aa23.26■■□□□ 1.31
VARS-220ENST00000461874 MAP4K4O95819 1239 aaPredicted RBP23.26■■□□□ 1.31
VARS-220ENST00000461874 SP3Q02447 781 aa23.26■■□□□ 1.31
VARS-220ENST00000461874 MAP3K10Q02779 954 aa23.26■■□□□ 1.31
VARS-220ENST00000461874 PICALMQ13492 652 aa23.26■■□□□ 1.31
VARS-220ENST00000461874 ZNF512BQ96KM6 892 aaPredicted RBP23.26■■□□□ 1.31
VARS-220ENST00000461874 ZCCHC17Q9NP64 241 aaKnown RBP23.26■■□□□ 1.31
VARS-220ENST00000461874 TRIM17Q9Y577 477 aa23.26■■□□□ 1.31
VARS-220ENST00000461874 BTBD19C9JJ37 291 aa23.25■■□□□ 1.31
VARS-220ENST00000461874 NPM3O75607 178 aaKnown RBP23.25■■□□□ 1.31
VARS-220ENST00000461874 OTOP1Q7RTM1 612 aa23.25■■□□□ 1.31
VARS-220ENST00000461874 DBNLQ9UJU6 430 aaKnown RBP23.25■■□□□ 1.31
VARS-220ENST00000461874 KCNH4Q9UQ05 1017 aa23.25■■□□□ 1.31
VARS-220ENST00000461874 SOX10P56693 466 aa23.24■■□□□ 1.31
VARS-220ENST00000461874 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.24■■□□□ 1.31
VARS-220ENST00000461874 CD99L2Q8TCZ2 262 aa23.24■■□□□ 1.31
VARS-220ENST00000461874 EAF2Q96CJ1 260 aaPredicted RBP23.24■■□□□ 1.31
VARS-220ENST00000461874 AK9Q5TCS8 1911 aa23.23■■□□□ 1.31
VARS-220ENST00000461874 CYP2E1P05181 493 aaPredicted RBP23.23■■□□□ 1.31
VARS-220ENST00000461874 CCDC8Q9H0W5 538 aaPredicted RBP23.23■■□□□ 1.31
VARS-220ENST00000461874 TLR7Q9NYK1 1049 aaKnown RBP23.23■■□□□ 1.31
VARS-220ENST00000461874 RCAN3Q9UKA8 241 aa23.22■■□□□ 1.31
VARS-220ENST00000461874 EXOC6BQ9Y2D4 811 aa23.22■■□□□ 1.31
VARS-220ENST00000461874 SLURP2P0DP57 97 aa23.21■■□□□ 1.31
VARS-220ENST00000461874 ZAP70P43403 619 aa23.21■■□□□ 1.31
VARS-220ENST00000461874 CAP1Q01518 475 aa23.21■■□□□ 1.31
VARS-220ENST00000461874 NAA16Q6N069 864 aaPredicted RBP23.21■■□□□ 1.31
VARS-220ENST00000461874 ERC1Q8IUD2 1116 aa23.21■■□□□ 1.31
VARS-220ENST00000461874 SCYL3Q8IZE3 742 aa23.21■■□□□ 1.31
VARS-220ENST00000461874 EFCC1Q9HA90 598 aa23.21■■□□□ 1.31
VARS-220ENST00000461874 DDX19BQ9UMR2 479 aa23.21■■□□□ 1.31
VARS-220ENST00000461874 COG6Q9Y2V7 657 aa23.21■■□□□ 1.31
VARS-220ENST00000461874 CXCL11O14625 94 aa23.2■■□□□ 1.3
VARS-220ENST00000461874 TBC1D12O60347 775 aa23.2■■□□□ 1.3
VARS-220ENST00000461874 TLR2O60603 784 aa23.2■■□□□ 1.3
VARS-220ENST00000461874 IGSF3O75054 1194 aa23.2■■□□□ 1.3
VARS-220ENST00000461874 ANKRD23Q86SG2 305 aa23.2■■□□□ 1.3
VARS-220ENST00000461874 PICK1Q9NRD5 415 aa23.2■■□□□ 1.3
VARS-220ENST00000461874 ZBTB40Q9NUA8 1239 aa23.2■■□□□ 1.3
VARS-220ENST00000461874 CTNND1O60716 968 aaKnown RBP23.19■■□□□ 1.3
VARS-220ENST00000461874 PTPRAP18433 802 aa23.19■■□□□ 1.3
VARS-220ENST00000461874 MOGSQ13724 837 aa23.19■■□□□ 1.3
VARS-220ENST00000461874 HSP90AB4PQ58FF6 505 aa23.19■■□□□ 1.3
VARS-220ENST00000461874 RPAP2Q8IXW5 612 aaPredicted RBP23.19■■□□□ 1.3
VARS-220ENST00000461874 TEX11Q8IYF3 940 aa23.19■■□□□ 1.3
VARS-220ENST00000461874 SH3RF3Q8TEJ3 882 aaPredicted RBP23.19■■□□□ 1.3
VARS-220ENST00000461874 NOL10Q9BSC4 688 aaKnown RBP23.19■■□□□ 1.3
VARS-220ENST00000461874 OSBPL5Q9H0X9 879 aaPredicted RBP23.19■■□□□ 1.3
VARS-220ENST00000461874 PIH1D3Q9NQM4 214 aaKnown RBP23.19■■□□□ 1.3
VARS-220ENST00000461874 PTPN22Q9Y2R2 807 aa23.19■■□□□ 1.3
VARS-220ENST00000461874 BAG3O95817 575 aa23.18■■□□□ 1.3
VARS-220ENST00000461874 PPP4CP60510 307 aa23.18■■□□□ 1.3
VARS-220ENST00000461874 ZHX2Q9Y6X8 837 aa23.18■■□□□ 1.3
VARS-220ENST00000461874 HTTP42858 3142 aa23.17■■□□□ 1.3
VARS-220ENST00000461874 PDHXO00330 501 aa23.17■■□□□ 1.3
VARS-220ENST00000461874 ARHGEF6Q15052 776 aa23.17■■□□□ 1.3
VARS-220ENST00000461874 ADGRA1Q86SQ6 560 aa23.17■■□□□ 1.3
VARS-220ENST00000461874 AACSQ86V21 672 aa23.17■■□□□ 1.3
VARS-220ENST00000461874 AATFQ9NY61 560 aaKnown RBP eCLIP23.17■■□□□ 1.3
VARS-220ENST00000461874 DOCK2Q92608 1830 aa23.17■■□□□ 1.3
VARS-220ENST00000461874 COL2A1P02458 1487 aaPredicted RBP23.17■■□□□ 1.3
VARS-220ENST00000461874 PLCG2P16885 1265 aa23.16■■□□□ 1.3
VARS-220ENST00000461874 SIRT2Q8IXJ6 389 aa23.16■■□□□ 1.3
VARS-220ENST00000461874 RHPN1Q8TCX5 695 aa23.16■■□□□ 1.3
VARS-220ENST00000461874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.16■■□□□ 1.3
VARS-220ENST00000461874 AFG3L2Q9Y4W6 797 aa23.16■■□□□ 1.3
VARS-220ENST00000461874 HMMRO75330 724 aa23.15■■□□□ 1.3
VARS-220ENST00000461874 CHMP4BQ9H444 224 aaKnown RBP23.15■■□□□ 1.3
VARS-220ENST00000461874 IL1RAPL2Q9NP60 686 aa23.15■■□□□ 1.3
VARS-220ENST00000461874 A0A0G2JLL6 359 aaPredicted RBP23.14■■□□□ 1.29
VARS-220ENST00000461874 FAM196BA6NMK8 535 aa23.14■■□□□ 1.29
VARS-220ENST00000461874 GPAT2Q6NUI2 795 aa23.14■■□□□ 1.29
VARS-220ENST00000461874 C17orf99Q6UX52 265 aa23.14■■□□□ 1.29
VARS-220ENST00000461874 PRRT2Q7Z6L0 340 aaPredicted RBP23.14■■□□□ 1.29
VARS-220ENST00000461874 LACTBP83111 547 aaPredicted RBP23.13■■□□□ 1.29
VARS-220ENST00000461874 FASTKD5Q7L8L6 764 aaKnown RBP23.13■■□□□ 1.29
VARS-220ENST00000461874 TGFBRAP1Q8WUH2 860 aa23.13■■□□□ 1.29
VARS-220ENST00000461874 DHX36Q9H2U1 1008 aaKnown RBP23.13■■□□□ 1.29
VARS-220ENST00000461874 CPA4Q9UI42 421 aa23.13■■□□□ 1.29
VARS-220ENST00000461874 NDUFB9Q9Y6M9 179 aa23.13■■□□□ 1.29
VARS-220ENST00000461874 ADGRA2Q96PE1 1338 aa23.12■■□□□ 1.29
VARS-220ENST00000461874 IDH1O75874 414 aaKnown RBP23.12■■□□□ 1.29
VARS-220ENST00000461874 CYP7A1P22680 504 aa23.12■■□□□ 1.29
VARS-220ENST00000461874 PDE3AQ14432 1141 aa23.12■■□□□ 1.29
VARS-220ENST00000461874 KIF22Q14807 665 aa23.12■■□□□ 1.29
VARS-220ENST00000461874 KIF1BPQ96EK5 621 aa23.12■■□□□ 1.29
VARS-220ENST00000461874 ARHGAP39Q9C0H5 1083 aa23.12■■□□□ 1.29
VARS-220ENST00000461874 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.12■■□□□ 1.29
VARS-220ENST00000461874 PI4KBQ9UBF8 816 aa23.12■■□□□ 1.29
VARS-220ENST00000461874 HERC5Q9UII4 1024 aaKnown RBP23.12■■□□□ 1.29
VARS-220ENST00000461874 MAPKAPK5Q8IW41 473 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms