RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TGFBRAP1Q8WUH2 860 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 FAM151AQ8WW52 585 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 TMEM39BQ9GZU3 492 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 TRPM7Q96QT4 1865 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 DDX60LQ5H9U9 1706 aaKnown RBP13.57□□□□□ -0.24
SSBP1-202ENST00000461433 MYH1P12882 1939 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 FLT1P17948 1338 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 PICALMQ13492 652 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 MCMDC2Q4G0Z9 681 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 SH3BP5LQ7L8J4 393 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 SDR42E1Q8WUS8 393 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 AIDAQ96BJ3 306 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 IL25Q9H293 177 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 PPP2R3BQ9Y5P8 575 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 BAZ2AQ9UIF9 1905 aaKnown RBP13.56□□□□□ -0.24
SSBP1-202ENST00000461433 HIP1O00291 1037 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 FOXP2O15409 715 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 TNNI2P48788 182 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
SSBP1-202ENST00000461433 ZNF589Q86UQ0 364 aaPredicted RBP13.56□□□□□ -0.24
SSBP1-202ENST00000461433 MAPKAPK5Q8IW41 473 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 CDCA5Q96FF9 252 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 CRNKL1Q9BZJ0 848 aaKnown RBP13.56□□□□□ -0.24
SSBP1-202ENST00000461433 OSBPL5Q9H0X9 879 aaPredicted RBP13.56□□□□□ -0.24
SSBP1-202ENST00000461433 SSC5DA1L4H1 1573 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 NAV1Q8NEY1 1877 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 SIPA1L1O43166 1804 aa13.56□□□□□ -0.24
SSBP1-202ENST00000461433 DDTLA6NHG4 134 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-202ENST00000461433 GSG1L2A8MUP6 293 aa13.55□□□□□ -0.24
SSBP1-202ENST00000461433 NBPF12Q5TAG4 269 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-202ENST00000461433 DCP1AQ9NPI6 582 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-202ENST00000461433 DIAPH3Q9NSV4 1193 aa13.55□□□□□ -0.24
SSBP1-202ENST00000461433 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-202ENST00000461433 ATRNL1Q5VV63 1379 aa13.55□□□□□ -0.24
SSBP1-202ENST00000461433 RPAP1Q9BWH6 1393 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-202ENST00000461433 USP5P45974 858 aa13.54□□□□□ -0.24
SSBP1-202ENST00000461433 VPS53Q5VIR6 699 aa13.54□□□□□ -0.24
SSBP1-202ENST00000461433 CST9Q5W186 159 aa13.54□□□□□ -0.24
SSBP1-202ENST00000461433 SLC4A4Q9Y6R1 1079 aa13.54□□□□□ -0.24
SSBP1-202ENST00000461433 EPB41L4AQ9HCS5 686 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-202ENST00000461433 ATP8A2Q9NTI2 1148 aa13.53□□□□□ -0.24
SSBP1-202ENST00000461433 PALD1Q9ULE6 856 aa13.53□□□□□ -0.24
SSBP1-202ENST00000461433 CCDC171Q6TFL3 1326 aa13.53□□□□□ -0.24
SSBP1-202ENST00000461433 PATL2C9JE40 543 aaKnown RBP13.53□□□□□ -0.24
SSBP1-202ENST00000461433 SLURP2P0DP57 97 aa13.53□□□□□ -0.24
SSBP1-202ENST00000461433 GNAT2P19087 354 aa13.53□□□□□ -0.24
SSBP1-202ENST00000461433 SAP30BPQ9UHR5 308 aaKnown RBP13.53□□□□□ -0.24
SSBP1-202ENST00000461433 SGSM2O43147 1006 aa13.52□□□□□ -0.25
SSBP1-202ENST00000461433 MAP3K10Q02779 954 aa13.52□□□□□ -0.25
SSBP1-202ENST00000461433 EVX2Q03828 476 aa13.52□□□□□ -0.25
SSBP1-202ENST00000461433 FZD1Q9UP38 647 aa13.52□□□□□ -0.25
SSBP1-202ENST00000461433 SMIM22K7EJ46 135 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 CDC45O75419 566 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 CELF2O95319 508 aaKnown RBP13.51□□□□□ -0.25
SSBP1-202ENST00000461433 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
SSBP1-202ENST00000461433 PLCD1P51178 756 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 SUPT20HL1Q3ZLR7 823 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 GIMAP6Q6P9H5 292 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 ZSCAN29Q8IWY8 852 aaPredicted RBP13.51□□□□□ -0.25
SSBP1-202ENST00000461433 IFNL3Q8IZI9 196 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 CSRNP1Q96S65 589 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 DHX36Q9H2U1 1008 aaKnown RBP13.51□□□□□ -0.25
SSBP1-202ENST00000461433 MCM9Q9NXL9 1143 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 PAPPA2Q9BXP8 1791 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 RAD50Q92878 1312 aa13.51□□□□□ -0.25
SSBP1-202ENST00000461433 CYP2D6P10635 497 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 C1QTNF8P60827 252 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
SSBP1-202ENST00000461433 RUFY2Q8WXA3 655 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 ESYT1Q9BSJ8 1104 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 CYP2D7A0A087X1C5 515 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 USP17L21D6R901 530 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 USP2O75604 605 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-202ENST00000461433 ALX1Q15699 326 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 SBK1Q52WX2 424 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 MOB2Q70IA6 237 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 MIGA2Q7L4E1 593 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 PI4KBQ9UBF8 816 aa13.5□□□□□ -0.25
SSBP1-202ENST00000461433 LAMB1P07942 1786 aa13.49□□□□□ -0.25
SSBP1-202ENST00000461433 OTOFQ9HC10 1997 aa13.49□□□□□ -0.25
SSBP1-202ENST00000461433 TBC1D12O60347 775 aa13.49□□□□□ -0.25
SSBP1-202ENST00000461433 APPP05067 770 aa13.49□□□□□ -0.25
SSBP1-202ENST00000461433 NF2P35240 595 aa13.49□□□□□ -0.25
SSBP1-202ENST00000461433 MFAP1P55081 439 aaKnown RBP13.49□□□□□ -0.25
SSBP1-202ENST00000461433 MAP3K11Q16584 847 aa13.49□□□□□ -0.25
SSBP1-202ENST00000461433 C12orf60Q5U649 245 aa13.49□□□□□ -0.25
SSBP1-202ENST00000461433 DNAJC18Q9H819 358 aa13.49□□□□□ -0.25
SSBP1-202ENST00000461433 GBA2Q9HCG7 927 aaPredicted RBP13.49□□□□□ -0.25
SSBP1-202ENST00000461433 FAM196BA6NMK8 535 aa13.48□□□□□ -0.25
SSBP1-202ENST00000461433 FGAP02671 866 aa13.48□□□□□ -0.25
SSBP1-202ENST00000461433 POLR3DP05423 398 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-202ENST00000461433 APLP1P51693 650 aa13.48□□□□□ -0.25
SSBP1-202ENST00000461433 PTH1RQ03431 593 aa13.48□□□□□ -0.25
SSBP1-202ENST00000461433 GABPAQ06546 454 aa13.48□□□□□ -0.25
SSBP1-202ENST00000461433 PRKG1Q13976 671 aa13.48□□□□□ -0.25
SSBP1-202ENST00000461433 TTC6Q86TZ1 520 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms