RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 ZBTB48P10074 688 aaPredicted RBP24.91■■□□□ 1.58
SCAF8-204ENST00000461219 PRDM10Q9NQV6 1147 aa24.91■■□□□ 1.58
SCAF8-204ENST00000461219 SUPT16HQ9Y5B9 1047 aaKnown RBP24.91■■□□□ 1.58
SCAF8-204ENST00000461219 CASP8AP2Q9UKL3 1982 aa24.91■■□□□ 1.58
SCAF8-204ENST00000461219 GOLIM4O00461 696 aa24.9■■□□□ 1.58
SCAF8-204ENST00000461219 WDHD1O75717 1129 aaPredicted RBP24.9■■□□□ 1.58
SCAF8-204ENST00000461219 AAMPQ13685 434 aa24.9■■□□□ 1.58
SCAF8-204ENST00000461219 VGLL4Q14135 290 aa24.9■■□□□ 1.58
SCAF8-204ENST00000461219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.9■■□□□ 1.58
SCAF8-204ENST00000461219 OPTNQ96CV9 577 aa24.9■■□□□ 1.58
SCAF8-204ENST00000461219 BOLA2Q9H3K6 86 aa24.9■■□□□ 1.58
SCAF8-204ENST00000461219 ANTXR1Q9H6X2 564 aa24.9■■□□□ 1.58
SCAF8-204ENST00000461219 MYH1P12882 1939 aa24.89■■□□□ 1.58
SCAF8-204ENST00000461219 MANSC4A6NHS7 340 aaPredicted RBP24.89■■□□□ 1.58
SCAF8-204ENST00000461219 RHBDL3P58872 404 aa24.89■■□□□ 1.58
SCAF8-204ENST00000461219 COL13A1Q5TAT6 717 aaPredicted RBP24.89■■□□□ 1.58
SCAF8-204ENST00000461219 ZFPM1Q8IX07 1006 aa24.89■■□□□ 1.58
SCAF8-204ENST00000461219 SH3RF3Q8TEJ3 882 aaPredicted RBP24.89■■□□□ 1.58
SCAF8-204ENST00000461219 SAGE1Q9NXZ1 904 aa24.89■■□□□ 1.58
SCAF8-204ENST00000461219 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.88■■□□□ 1.57
SCAF8-204ENST00000461219 CERS3Q8IU89 383 aa24.88■■□□□ 1.57
SCAF8-204ENST00000461219 DDX4Q9NQI0 724 aaKnown RBP24.88■■□□□ 1.57
SCAF8-204ENST00000461219 PAG1Q9NWQ8 432 aa24.88■■□□□ 1.57
SCAF8-204ENST00000461219 RNF186Q9NXI6 227 aa24.88■■□□□ 1.57
SCAF8-204ENST00000461219 LAMB1P07942 1786 aa24.88■■□□□ 1.57
SCAF8-204ENST00000461219 ATP5JP18859 108 aa24.87■■□□□ 1.57
SCAF8-204ENST00000461219 TMED8Q6PL24 325 aaPredicted RBP24.87■■□□□ 1.57
SCAF8-204ENST00000461219 OTUD5Q96G74 571 aa24.87■■□□□ 1.57
SCAF8-204ENST00000461219 RFX7Q2KHR2 1363 aa24.86■■□□□ 1.57
SCAF8-204ENST00000461219 INHBEP58166 350 aa24.86■■□□□ 1.57
SCAF8-204ENST00000461219 SLC9C2Q5TAH2 1124 aa24.86■■□□□ 1.57
SCAF8-204ENST00000461219 OTUD7BQ6GQQ9 843 aa24.86■■□□□ 1.57
SCAF8-204ENST00000461219 TNS4Q8IZW8 715 aa24.86■■□□□ 1.57
SCAF8-204ENST00000461219 MIGA1Q8NAN2 632 aa24.86■■□□□ 1.57
SCAF8-204ENST00000461219 TGFBRAP1Q8WUH2 860 aa24.86■■□□□ 1.57
SCAF8-204ENST00000461219 ZKSCAN4Q969J2 545 aaPredicted RBP24.86■■□□□ 1.57
SCAF8-204ENST00000461219 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.86■■□□□ 1.57
SCAF8-204ENST00000461219 ECHDC1Q9NTX5 307 aa24.86■■□□□ 1.57
SCAF8-204ENST00000461219 DDTLA6NHG4 134 aaPredicted RBP24.85■■□□□ 1.57
SCAF8-204ENST00000461219 NPM3O75607 178 aaKnown RBP24.85■■□□□ 1.57
SCAF8-204ENST00000461219 USP5P45974 858 aa24.85■■□□□ 1.57
SCAF8-204ENST00000461219 TM4SF4P48230 202 aa24.85■■□□□ 1.57
SCAF8-204ENST00000461219 ADGRA1Q86SQ6 560 aa24.85■■□□□ 1.57
SCAF8-204ENST00000461219 TRIM34Q9BYJ4 488 aa24.85■■□□□ 1.57
SCAF8-204ENST00000461219 OSBPL5Q9H0X9 879 aaPredicted RBP24.85■■□□□ 1.57
SCAF8-204ENST00000461219 PPP4CP60510 307 aa24.84■■□□□ 1.57
SCAF8-204ENST00000461219 ERO1BQ86YB8 467 aa24.84■■□□□ 1.57
SCAF8-204ENST00000461219 MAPKAPK5Q8IW41 473 aa24.84■■□□□ 1.57
SCAF8-204ENST00000461219 HAUS7Q99871 368 aa24.84■■□□□ 1.57
SCAF8-204ENST00000461219 DOCK1Q14185 1865 aa24.83■■□□□ 1.57
SCAF8-204ENST00000461219 ALDH1A1P00352 501 aa24.83■■□□□ 1.57
SCAF8-204ENST00000461219 INPP5BP32019 993 aa24.83■■□□□ 1.57
SCAF8-204ENST00000461219 DYNLL1P63167 89 aaKnown RBP24.83■■□□□ 1.57
SCAF8-204ENST00000461219 GCC1Q96CN9 775 aa24.83■■□□□ 1.57
SCAF8-204ENST00000461219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.83■■□□□ 1.576e-9■■■■□ 23.5
SCAF8-204ENST00000461219 PICK1Q9NRD5 415 aa24.83■■□□□ 1.57
SCAF8-204ENST00000461219 SNCAIPQ9Y6H5 919 aa24.83■■□□□ 1.57
SCAF8-204ENST00000461219 ATAD5Q96QE3 1844 aa24.83■■□□□ 1.57
SCAF8-204ENST00000461219 MAGEB6P1A0A0J9YX57 407 aa24.82■■□□□ 1.56
SCAF8-204ENST00000461219 PDE6AP16499 860 aa24.82■■□□□ 1.56
SCAF8-204ENST00000461219 GTF2A2P52657 109 aa24.82■■□□□ 1.56
SCAF8-204ENST00000461219 ANKRD45Q5TZF3 282 aa24.82■■□□□ 1.56
SCAF8-204ENST00000461219 EXOC6Q8TAG9 804 aa24.82■■□□□ 1.56
SCAF8-204ENST00000461219 EDC3Q96F86 508 aaKnown RBP24.82■■□□□ 1.56
SCAF8-204ENST00000461219 RWDD1Q9H446 243 aaPredicted RBP24.82■■□□□ 1.56
SCAF8-204ENST00000461219 NAV1Q8NEY1 1877 aa24.81■■□□□ 1.56
SCAF8-204ENST00000461219 SPDYE5A6NIY4 337 aa24.81■■□□□ 1.56
SCAF8-204ENST00000461219 ZSCAN25Q6NSZ9 544 aa24.81■■□□□ 1.56
SCAF8-204ENST00000461219 SH3BP5LQ7L8J4 393 aa24.81■■□□□ 1.56
SCAF8-204ENST00000461219 CRACR2BQ8N4Y2 399 aaPredicted RBP24.81■■□□□ 1.56
SCAF8-204ENST00000461219 CNKSR2Q8WXI2 1034 aa24.81■■□□□ 1.56
SCAF8-204ENST00000461219 DHX36Q9H2U1 1008 aaKnown RBP24.81■■□□□ 1.56
SCAF8-204ENST00000461219 COL2A1P02458 1487 aaPredicted RBP24.81■■□□□ 1.56
SCAF8-204ENST00000461219 FLT1P17948 1338 aa24.81■■□□□ 1.56
SCAF8-204ENST00000461219 ATRNL1Q5VV63 1379 aa24.8■■□□□ 1.56
SCAF8-204ENST00000461219 ERC2O15083 957 aa24.8■■□□□ 1.56
SCAF8-204ENST00000461219 HLA-DOAP06340 250 aa24.8■■□□□ 1.56
SCAF8-204ENST00000461219 GJA5P36382 358 aa24.8■■□□□ 1.56
SCAF8-204ENST00000461219 HDAC1Q13547 482 aaPredicted RBP24.8■■□□□ 1.56
SCAF8-204ENST00000461219 IFNL1Q8IU54 200 aa24.8■■□□□ 1.56
SCAF8-204ENST00000461219 ZNF532Q9HCE3 1301 aa24.8■■□□□ 1.56
SCAF8-204ENST00000461219 CCL15-CCL14A0A0B4J2E2 113 aa24.79■■□□□ 1.56
SCAF8-204ENST00000461219 TBC1D8O95759 1140 aa24.79■■□□□ 1.56
SCAF8-204ENST00000461219 CCL15Q16663 113 aa24.79■■□□□ 1.56
SCAF8-204ENST00000461219 PI4KBQ9UBF8 816 aa24.79■■□□□ 1.56
SCAF8-204ENST00000461219 SAP30BPQ9UHR5 308 aaKnown RBP24.79■■□□□ 1.56
SCAF8-204ENST00000461219 ZNF112Q9UJU3 913 aa24.79■■□□□ 1.56
SCAF8-204ENST00000461219 PPATQ06203 517 aa24.78■■□□□ 1.56
SCAF8-204ENST00000461219 PPIL2Q13356 520 aa24.78■■□□□ 1.56
SCAF8-204ENST00000461219 SNAPC2Q13487 334 aa24.78■■□□□ 1.56
SCAF8-204ENST00000461219 TSHZ3Q63HK5 1081 aa24.78■■□□□ 1.56
SCAF8-204ENST00000461219 CRNKL1Q9BZJ0 848 aaKnown RBP24.78■■□□□ 1.56
SCAF8-204ENST00000461219 CETPP11597 493 aa24.77■■□□□ 1.56
SCAF8-204ENST00000461219 NOL9Q5SY16 702 aaKnown RBP24.77■■□□□ 1.56
SCAF8-204ENST00000461219 SCYL3Q8IZE3 742 aa24.77■■□□□ 1.56
SCAF8-204ENST00000461219 HERC5Q9UII4 1024 aaKnown RBP24.77■■□□□ 1.56
SCAF8-204ENST00000461219 TTC41PQ6P2S7 1318 aa24.77■■□□□ 1.56
SCAF8-204ENST00000461219 FAM196BA6NMK8 535 aa24.76■■□□□ 1.55
SCAF8-204ENST00000461219 TBC1D12O60347 775 aa24.76■■□□□ 1.55
SCAF8-204ENST00000461219 SLC4A8Q2Y0W8 1093 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms