RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ANKLE1Q8NAG6 615 aa21.6■■□□□ 1.05
TOP3A-202ENST00000461127 DAGLAQ9Y4D2 1042 aa21.6■■□□□ 1.05
TOP3A-202ENST00000461127 NFIAQ12857 509 aa21.59■■□□□ 1.05
TOP3A-202ENST00000461127 PUM3Q15397 648 aaKnown RBP21.59■■□□□ 1.05
TOP3A-202ENST00000461127 KAZALD1Q96I82 304 aa21.59■■□□□ 1.05
TOP3A-202ENST00000461127 BICC1Q9H694 974 aaKnown RBP21.59■■□□□ 1.05
TOP3A-202ENST00000461127 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.58■■□□□ 1.05
TOP3A-202ENST00000461127 USP40Q9NVE5 1235 aa21.58■■□□□ 1.05
TOP3A-202ENST00000461127 ZMYND8Q9ULU4 1186 aaPredicted RBP21.58■■□□□ 1.05
TOP3A-202ENST00000461127 ALPK3Q96L96 1907 aa21.58■■□□□ 1.04
TOP3A-202ENST00000461127 MYH13Q9UKX3 1938 aa21.58■■□□□ 1.04
TOP3A-202ENST00000461127 NBPF7P0C2Y1 421 aaPredicted RBP21.57■■□□□ 1.04
TOP3A-202ENST00000461127 PTPRAP18433 802 aa21.57■■□□□ 1.04
TOP3A-202ENST00000461127 DIXDC1Q155Q3 683 aa21.57■■□□□ 1.04
TOP3A-202ENST00000461127 LRIT3Q3SXY7 679 aa21.57■■□□□ 1.04
TOP3A-202ENST00000461127 RABL6Q3YEC7 729 aaPredicted RBP21.57■■□□□ 1.04
TOP3A-202ENST00000461127 DIS3LQ8TF46 1054 aaKnown RBP21.57■■□□□ 1.04
TOP3A-202ENST00000461127 FAM198AQ9UFP1 575 aa21.57■■□□□ 1.04
TOP3A-202ENST00000461127 AFG3L2Q9Y4W6 797 aa21.57■■□□□ 1.04
TOP3A-202ENST00000461127 LRRFIP2Q9Y608 721 aaKnown RBP21.57■■□□□ 1.04
TOP3A-202ENST00000461127 SLC5A1P13866 664 aa21.56■■□□□ 1.04
TOP3A-202ENST00000461127 Q7L0L9 218 aa21.56■■□□□ 1.04
TOP3A-202ENST00000461127 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
TOP3A-202ENST00000461127 TDHQ8IZJ6 230 aa21.56■■□□□ 1.04
TOP3A-202ENST00000461127 NBPF3Q9H094 633 aa21.56■■□□□ 1.04
TOP3A-202ENST00000461127 UTYO14607 1347 aa21.55■■□□□ 1.04
TOP3A-202ENST00000461127 DOCK3Q8IZD9 2030 aa21.55■■□□□ 1.04
TOP3A-202ENST00000461127 PHF20L1A8MW92 1017 aa21.55■■□□□ 1.04
TOP3A-202ENST00000461127 ANKRD13CQ8N6S4 541 aa21.55■■□□□ 1.04
TOP3A-202ENST00000461127 MTMR10Q9NXD2 777 aa21.55■■□□□ 1.04
TOP3A-202ENST00000461127 PNMA3Q9UL41 463 aa21.55■■□□□ 1.04
TOP3A-202ENST00000461127 HMGCRP04035 888 aa21.54■■□□□ 1.04
TOP3A-202ENST00000461127 LDHBP07195 334 aaKnown RBP21.54■■□□□ 1.04
TOP3A-202ENST00000461127 FGFR2P21802 821 aa21.54■■□□□ 1.04
TOP3A-202ENST00000461127 ZSCAN29Q8IWY8 852 aaPredicted RBP21.54■■□□□ 1.04
TOP3A-202ENST00000461127 LPIN2Q92539 896 aa21.54■■□□□ 1.04
TOP3A-202ENST00000461127 DOCK2Q92608 1830 aa21.53■■□□□ 1.04
TOP3A-202ENST00000461127 TRIM75PA6NK02 468 aa21.53■■□□□ 1.04
TOP3A-202ENST00000461127 PRDX5P30044 214 aa21.53■■□□□ 1.04
TOP3A-202ENST00000461127 MAGEA10P43363 369 aaPredicted RBP21.53■■□□□ 1.04
TOP3A-202ENST00000461127 FAM110CQ1W6H9 321 aa21.53■■□□□ 1.04
TOP3A-202ENST00000461127 HMX1Q9NP08 348 aaPredicted RBP21.53■■□□□ 1.04
TOP3A-202ENST00000461127 SPINK5Q9NQ38 1064 aaPredicted RBP21.53■■□□□ 1.04
TOP3A-202ENST00000461127 AGTPBP1Q9UPW5 1226 aa21.53■■□□□ 1.04
TOP3A-202ENST00000461127 RPTORQ8N122 1335 aa21.53■■□□□ 1.04
TOP3A-202ENST00000461127 CTNND1O60716 968 aaKnown RBP21.52■■□□□ 1.04
TOP3A-202ENST00000461127 ENTPD3O75355 529 aa21.52■■□□□ 1.04
TOP3A-202ENST00000461127 SYN1P17600 705 aa21.52■■□□□ 1.04
TOP3A-202ENST00000461127 ZFPM1Q8IX07 1006 aa21.52■■□□□ 1.04
TOP3A-202ENST00000461127 ANKRD44Q8N8A2 993 aa21.52■■□□□ 1.04
TOP3A-202ENST00000461127 KLHDC4Q8TBB5 520 aa21.52■■□□□ 1.04
TOP3A-202ENST00000461127 UBE2OQ9C0C9 1292 aaKnown RBP21.52■■□□□ 1.04
TOP3A-202ENST00000461127 C11orf49Q9H6J7 331 aa21.52■■□□□ 1.04
TOP3A-202ENST00000461127 GNL3LQ9NVN8 582 aaKnown RBP21.52■■□□□ 1.04
TOP3A-202ENST00000461127 PTPRFP10586 1907 aa21.52■■□□□ 1.04
TOP3A-202ENST00000461127 ATRNL1Q5VV63 1379 aa21.51■■□□□ 1.03
TOP3A-202ENST00000461127 RGS3P49796 1198 aa21.51■■□□□ 1.03
TOP3A-202ENST00000461127 MIER1Q8N108 512 aa21.51■■□□□ 1.03
TOP3A-202ENST00000461127 IDI2Q9BXS1 227 aa21.51■■□□□ 1.03
TOP3A-202ENST00000461127 SALL2Q9Y467 1007 aaPredicted RBP21.51■■□□□ 1.03
TOP3A-202ENST00000461127 UNC80Q8N2C7 3258 aa21.5■■□□□ 1.03
TOP3A-202ENST00000461127 GCLCP48506 637 aaPredicted RBP21.5■■□□□ 1.03
TOP3A-202ENST00000461127 MAP3K10Q02779 954 aa21.49■■□□□ 1.03
TOP3A-202ENST00000461127 PABPC4Q13310 644 aaKnown RBP eCLIP21.49■■□□□ 1.03
TOP3A-202ENST00000461127 COL25A1Q9BXS0 654 aaPredicted RBP21.49■■□□□ 1.03
TOP3A-202ENST00000461127 DOCK1Q14185 1865 aa21.49■■□□□ 1.03
TOP3A-202ENST00000461127 EYA2O00167 538 aa21.48■■□□□ 1.03
TOP3A-202ENST00000461127 PROCA1Q8NCQ7 364 aaPredicted RBP21.48■■□□□ 1.03
TOP3A-202ENST00000461127 DDX60LQ5H9U9 1706 aaKnown RBP21.47■■□□□ 1.03
TOP3A-202ENST00000461127 TREML2Q5T2D2 321 aa21.47■■□□□ 1.03
TOP3A-202ENST00000461127 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.47■■□□□ 1.03
TOP3A-202ENST00000461127 SLF2Q8IX21 1173 aa21.47■■□□□ 1.03
TOP3A-202ENST00000461127 ZGPATQ8N5A5 531 aaKnown RBP21.47■■□□□ 1.03
TOP3A-202ENST00000461127 OGDHLQ9ULD0 1010 aa21.47■■□□□ 1.03
TOP3A-202ENST00000461127 DENND2AQ9ULE3 1009 aa21.47■■□□□ 1.03
TOP3A-202ENST00000461127 SALL1Q9NSC2 1324 aa21.47■■□□□ 1.03
TOP3A-202ENST00000461127 PHIPQ8WWQ0 1821 aa21.46■■□□□ 1.03
TOP3A-202ENST00000461127 MYH2Q9UKX2 1941 aa21.45■■□□□ 1.02
TOP3A-202ENST00000461127 SEMA3EO15041 775 aa21.45■■□□□ 1.02
TOP3A-202ENST00000461127 CCDC184Q52MB2 194 aa21.45■■□□□ 1.02
TOP3A-202ENST00000461127 SH3BP5LQ7L8J4 393 aa21.45■■□□□ 1.02
TOP3A-202ENST00000461127 DDTLA6NHG4 134 aaPredicted RBP21.44■■□□□ 1.02
TOP3A-202ENST00000461127 ATP2B3Q16720 1220 aa21.44■■□□□ 1.02
TOP3A-202ENST00000461127 DZIP1Q86YF9 867 aaKnown RBP21.44■■□□□ 1.02
TOP3A-202ENST00000461127 TBC1D2Q9BYX2 928 aa21.44■■□□□ 1.02
TOP3A-202ENST00000461127 GJD2Q9UKL4 321 aa21.44■■□□□ 1.02
TOP3A-202ENST00000461127 GAKO14976 1311 aa21.44■■□□□ 1.02
TOP3A-202ENST00000461127 TRIM32Q13049 653 aa21.43■■□□□ 1.02
TOP3A-202ENST00000461127 PICALMQ13492 652 aa21.43■■□□□ 1.02
TOP3A-202ENST00000461127 CCDC84Q86UT8 332 aaPredicted RBP21.43■■□□□ 1.02
TOP3A-202ENST00000461127 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.43■■□□□ 1.02
TOP3A-202ENST00000461127 TBC1D12O60347 775 aa21.42■■□□□ 1.02
TOP3A-202ENST00000461127 SPP2Q13103 211 aa21.42■■□□□ 1.02
TOP3A-202ENST00000461127 RFX7Q2KHR2 1363 aa21.42■■□□□ 1.02
TOP3A-202ENST00000461127 ZNF280CQ8ND82 737 aa21.42■■□□□ 1.02
TOP3A-202ENST00000461127 OSBPL5Q9H0X9 879 aaPredicted RBP21.42■■□□□ 1.02
TOP3A-202ENST00000461127 CEP126Q9P2H0 1117 aa21.42■■□□□ 1.02
TOP3A-202ENST00000461127 PFASO15067 1338 aa21.41■■□□□ 1.02
TOP3A-202ENST00000461127 PRKAR2AP13861 404 aaKnown RBP21.41■■□□□ 1.02
TOP3A-202ENST00000461127 FAM109BQ6ICB4 259 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms