RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 MAP3K10Q02779 954 aa27.24■■□□□ 1.95
HMG20B-207ENST00000461099 FASTKD5Q7L8L6 764 aaKnown RBP27.24■■□□□ 1.95
HMG20B-207ENST00000461099 NKX2-3Q8TAU0 364 aa27.24■■□□□ 1.95
HMG20B-207ENST00000461099 SHISA4Q96DD7 197 aa27.24■■□□□ 1.95
HMG20B-207ENST00000461099 A0A0G2JLL6 359 aaPredicted RBP27.23■■□□□ 1.95
HMG20B-207ENST00000461099 FCGRTP55899 365 aa27.23■■□□□ 1.95
HMG20B-207ENST00000461099 TIMM10P62072 90 aa27.23■■□□□ 1.95
HMG20B-207ENST00000461099 SH3BP5LQ7L8J4 393 aa27.23■■□□□ 1.95
HMG20B-207ENST00000461099 PRRT2Q7Z6L0 340 aaPredicted RBP27.23■■□□□ 1.95
HMG20B-207ENST00000461099 DZIP1Q86YF9 867 aaKnown RBP27.23■■□□□ 1.95
HMG20B-207ENST00000461099 ZSCAN29Q8IWY8 852 aaPredicted RBP27.23■■□□□ 1.95
HMG20B-207ENST00000461099 SLF2Q8IX21 1173 aa27.23■■□□□ 1.95
HMG20B-207ENST00000461099 FAM163AQ96GL9 167 aaPredicted RBP27.23■■□□□ 1.95
HMG20B-207ENST00000461099 API5Q9BZZ5 524 aaKnown RBP27.23■■□□□ 1.95
HMG20B-207ENST00000461099 CT47B1P0C2W7 299 aaPredicted RBP27.22■■□□□ 1.95
HMG20B-207ENST00000461099 CCL5P13501 91 aa27.22■■□□□ 1.95
HMG20B-207ENST00000461099 RASGRF1Q13972 1273 aa27.22■■□□□ 1.95
HMG20B-207ENST00000461099 BIN2Q9UBW5 565 aaPredicted RBP27.22■■□□□ 1.95
HMG20B-207ENST00000461099 ABCF2Q9UG63 623 aa27.22■■□□□ 1.95
HMG20B-207ENST00000461099 AFG3L2Q9Y4W6 797 aa27.22■■□□□ 1.95
HMG20B-207ENST00000461099 DOCK2Q92608 1830 aa27.22■■□□□ 1.95
HMG20B-207ENST00000461099 PDS5AQ29RF7 1337 aaKnown RBP27.21■■□□□ 1.95
HMG20B-207ENST00000461099 GJB1P08034 283 aa27.21■■□□□ 1.95
HMG20B-207ENST00000461099 GJA8P48165 433 aa27.21■■□□□ 1.95
HMG20B-207ENST00000461099 PRKCZQ05513 592 aa27.21■■□□□ 1.95
HMG20B-207ENST00000461099 RFX7Q2KHR2 1363 aa27.21■■□□□ 1.95
HMG20B-207ENST00000461099 DDTLA6NHG4 134 aaPredicted RBP27.2■■□□□ 1.94
HMG20B-207ENST00000461099 SPTY2D1Q68D10 685 aaPredicted RBP27.2■■□□□ 1.94
HMG20B-207ENST00000461099 MEIS3Q99687 375 aa27.2■■□□□ 1.94
HMG20B-207ENST00000461099 RNF208Q9H0X6 261 aa27.2■■□□□ 1.94
HMG20B-207ENST00000461099 CTNND1O60716 968 aaKnown RBP27.19■■□□□ 1.94
HMG20B-207ENST00000461099 UBXN2AP68543 259 aa27.19■■□□□ 1.94
HMG20B-207ENST00000461099 GADL1Q6ZQY3 521 aa27.19■■□□□ 1.94
HMG20B-207ENST00000461099 DPF3Q92784 378 aa27.19■■□□□ 1.94
HMG20B-207ENST00000461099 DDX4Q9NQI0 724 aaKnown RBP27.19■■□□□ 1.94
HMG20B-207ENST00000461099 SLC45A1Q9Y2W3 748 aa27.19■■□□□ 1.94
HMG20B-207ENST00000461099 BTDP43251 543 aa27.18■■□□□ 1.94
HMG20B-207ENST00000461099 UBE2Q1Q7Z7E8 422 aa27.18■■□□□ 1.94
HMG20B-207ENST00000461099 SLAIN1Q8ND83 568 aa27.18■■□□□ 1.94
HMG20B-207ENST00000461099 GABRQQ9UN88 632 aa27.18■■□□□ 1.94
HMG20B-207ENST00000461099 AKAP2Q9Y2D5 859 aa27.18■■□□□ 1.94
HMG20B-207ENST00000461099 MGAMO43451 1857 aa27.18■■□□□ 1.94
HMG20B-207ENST00000461099 A0A1B0GUL7 405 aa27.17■■□□□ 1.94
HMG20B-207ENST00000461099 SLURP2P0DP57 97 aa27.17■■□□□ 1.94
HMG20B-207ENST00000461099 PICALMQ13492 652 aa27.17■■□□□ 1.94
HMG20B-207ENST00000461099 XAGE2Q96GT9 111 aa27.17■■□□□ 1.94
HMG20B-207ENST00000461099 MROH7-TTC4A0A0A0MT08 1334 aa27.16■■□□□ 1.94
HMG20B-207ENST00000461099 TRIOBPQ9H2D6 2365 aa27.16■■□□□ 1.94
HMG20B-207ENST00000461099 TRIM75PA6NK02 468 aa27.15■■□□□ 1.94
HMG20B-207ENST00000461099 MECOMQ03112 1051 aa27.15■■□□□ 1.94
HMG20B-207ENST00000461099 TFCP2Q12800 502 aa27.15■■□□□ 1.94
HMG20B-207ENST00000461099 MVPQ14764 893 aaKnown RBP27.15■■□□□ 1.94
HMG20B-207ENST00000461099 ERICH6Q7L0X2 663 aa27.15■■□□□ 1.94
HMG20B-207ENST00000461099 GPR75-ASB3A0A0A6YYF3 556 aa27.14■■□□□ 1.94
HMG20B-207ENST00000461099 SRGAP3O43295 1099 aa27.14■■□□□ 1.94
HMG20B-207ENST00000461099 ADCY3O60266 1144 aa27.14■■□□□ 1.94
HMG20B-207ENST00000461099 GNAI3P08754 354 aa27.14■■□□□ 1.94
HMG20B-207ENST00000461099 RHBDL3P58872 404 aa27.14■■□□□ 1.94
HMG20B-207ENST00000461099 SMCR8Q8TEV9 937 aaPredicted RBP27.14■■□□□ 1.94
HMG20B-207ENST00000461099 HTATIP2Q9BUP3 242 aa27.14■■□□□ 1.94
HMG20B-207ENST00000461099 RANBP2P49792 3224 aaKnown RBP27.13■■□□□ 1.93
HMG20B-207ENST00000461099 DOCK1Q14185 1865 aa27.13■■□□□ 1.93
HMG20B-207ENST00000461099 TBC1D12O60347 775 aa27.13■■□□□ 1.93
HMG20B-207ENST00000461099 FLT3LGP49771 235 aa27.13■■□□□ 1.93
HMG20B-207ENST00000461099 CHRDL2Q6WN34 429 aa27.13■■□□□ 1.93
HMG20B-207ENST00000461099 ZNF384Q8TF68 577 aa27.13■■□□□ 1.93
HMG20B-207ENST00000461099 U2AF1L4Q8WU68 220 aaKnown RBP27.13■■□□□ 1.93
HMG20B-207ENST00000461099 UNC93B1Q9H1C4 597 aa27.13■■□□□ 1.93
HMG20B-207ENST00000461099 PTPRFP10586 1907 aa27.13■■□□□ 1.93
HMG20B-207ENST00000461099 PHIPQ8WWQ0 1821 aa27.13■■□□□ 1.93
HMG20B-207ENST00000461099 NPM3O75607 178 aaKnown RBP27.12■■□□□ 1.93
HMG20B-207ENST00000461099 RARSP54136 660 aaKnown RBP27.12■■□□□ 1.93
HMG20B-207ENST00000461099 MTX1Q13505 466 aa27.12■■□□□ 1.93
HMG20B-207ENST00000461099 ARHGAP45Q92619 1136 aa27.12■■□□□ 1.93
HMG20B-207ENST00000461099 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.12■■□□□ 1.93
HMG20B-207ENST00000461099 AGTPBP1Q9UPW5 1226 aa27.12■■□□□ 1.93
HMG20B-207ENST00000461099 TNPO2O14787 897 aaKnown RBP27.11■■□□□ 1.93
HMG20B-207ENST00000461099 SGPL1O95470 568 aa27.11■■□□□ 1.93
HMG20B-207ENST00000461099 PXYLP1Q8TE99 480 aa27.11■■□□□ 1.93
HMG20B-207ENST00000461099 NEUROD6Q96NK8 337 aa27.11■■□□□ 1.93
HMG20B-207ENST00000461099 HMG20BQ9P0W2 317 aa27.11■■□□□ 1.93
HMG20B-207ENST00000461099 SZT2Q5T011 3432 aa27.11■■□□□ 1.93
HMG20B-207ENST00000461099 ELNP15502 786 aa27.1■■□□□ 1.93
HMG20B-207ENST00000461099 IRF5Q13568 498 aa27.1■■□□□ 1.93
HMG20B-207ENST00000461099 CCDC84Q86UT8 332 aaPredicted RBP27.1■■□□□ 1.93
HMG20B-207ENST00000461099 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.1■■□□□ 1.93
HMG20B-207ENST00000461099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.1■■□□□ 1.93
HMG20B-207ENST00000461099 FARP2O94887 1054 aaPredicted RBP27.09■■□□□ 1.93
HMG20B-207ENST00000461099 MAP4K4O95819 1239 aaPredicted RBP27.09■■□□□ 1.93
HMG20B-207ENST00000461099 LDHCP07864 332 aa27.09■■□□□ 1.93
HMG20B-207ENST00000461099 GSTO1P78417 241 aa27.09■■□□□ 1.93
HMG20B-207ENST00000461099 SPATA5Q8NB90 893 aa27.09■■□□□ 1.93
HMG20B-207ENST00000461099 RBM27Q9P2N5 1060 aaKnown RBP27.09■■□□□ 1.93
HMG20B-207ENST00000461099 INHAP05111 366 aa27.08■■□□□ 1.93
HMG20B-207ENST00000461099 TREML2Q5T2D2 321 aa27.08■■□□□ 1.93
HMG20B-207ENST00000461099 GORABQ5T7V8 394 aa27.08■■□□□ 1.93
HMG20B-207ENST00000461099 ANKRD13CQ8N6S4 541 aa27.08■■□□□ 1.93
HMG20B-207ENST00000461099 NSUN4Q96CB9 384 aaKnown RBP27.08■■□□□ 1.93
HMG20B-207ENST00000461099 OSBPL5Q9H0X9 879 aaPredicted RBP27.08■■□□□ 1.93
HMG20B-207ENST00000461099 PNMA3Q9UL41 463 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms