RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
RTN4-212ENST00000461004 DICER1Q9UPY3 1922 aaKnown RBP9.07□□□□□ -0.96
RTN4-212ENST00000461004 CIAO1O76071 339 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 PDE8BO95263 885 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 FGFR2P21802 821 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 GYG1P46976 350 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 MMP16P51512 607 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 EIF6P56537 245 aaKnown RBP9.06□□□□□ -0.96
RTN4-212ENST00000461004 TFCP2Q12800 502 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 LYPD8Q6UX82 237 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 EPS8L1Q8TE68 723 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 FAM84BQ96KN1 310 aaPredicted RBP9.06□□□□□ -0.96
RTN4-212ENST00000461004 EYA3Q99504 573 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 VPS33BQ9H267 617 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 JAG2Q9Y219 1238 aa9.06□□□□□ -0.96
RTN4-212ENST00000461004 MROH5Q6ZUA9 1318 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 TIAM2Q8IVF5 1701 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 MED23Q9ULK4 1368 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 PSMD14O00487 310 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 SURF6O75683 361 aaKnown RBP9.05□□□□□ -0.96
RTN4-212ENST00000461004 SASH1O94885 1247 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 S1PR4O95977 384 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 ADORA1P30542 326 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 IL15P40933 162 aaPredicted RBP9.05□□□□□ -0.96
RTN4-212ENST00000461004 TIMM10P62072 90 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 KCNC4Q03721 635 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 EXOC6Q8TAG9 804 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 POM121Q96HA1 1249 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 TRIM34Q9BYJ4 488 aa9.05□□□□□ -0.96
RTN4-212ENST00000461004 SCN9AQ15858 1988 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 A0A1B0GUL6 1792 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 EPS15P42566 896 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 UBE4AQ14139 1066 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 CIAPIN1Q6FI81 312 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 C15orf52Q6ZUT6 534 aaKnown RBP9.04□□□□□ -0.96
RTN4-212ENST00000461004 SLC6A16Q9GZN6 736 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 CD209Q9NNX6 404 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 CEP126Q9P2H0 1117 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
RTN4-212ENST00000461004 EXOC6BQ9Y2D4 811 aa9.04□□□□□ -0.96
RTN4-212ENST00000461004 NOP58Q9Y2X3 529 aaKnown RBP9.04□□□□□ -0.96
RTN4-212ENST00000461004 ZC3H4Q9UPT8 1303 aaKnown RBP9.04□□□□□ -0.96
RTN4-212ENST00000461004 APBB1O00213 710 aa9.03□□□□□ -0.96
RTN4-212ENST00000461004 GMPSP49915 693 aaPredicted RBP9.03□□□□□ -0.96
RTN4-212ENST00000461004 SCNN1DP51172 638 aa9.03□□□□□ -0.96
RTN4-212ENST00000461004 GTF2IP78347 998 aa9.03□□□□□ -0.96
RTN4-212ENST00000461004 G3BP1Q13283 466 aaKnown RBP eCLIP9.03□□□□□ -0.96
RTN4-212ENST00000461004 PUM3Q15397 648 aaKnown RBP9.03□□□□□ -0.96
RTN4-212ENST00000461004 ATP2B3Q16720 1220 aa9.03□□□□□ -0.96
RTN4-212ENST00000461004 FBXO33Q7Z6M2 555 aa9.03□□□□□ -0.96
RTN4-212ENST00000461004 RPAP2Q8IXW5 612 aaPredicted RBP9.03□□□□□ -0.96
RTN4-212ENST00000461004 GPC2Q8N158 579 aa9.03□□□□□ -0.96
RTN4-212ENST00000461004 COA1Q9GZY4 146 aa9.03□□□□□ -0.96
RTN4-212ENST00000461004 KDM2BQ8NHM5 1336 aa9.03□□□□□ -0.96
RTN4-212ENST00000461004 GPR37L1O60883 481 aa9.02□□□□□ -0.97
RTN4-212ENST00000461004 VIL1P09327 827 aaKnown RBP9.02□□□□□ -0.97
RTN4-212ENST00000461004 IL1R1P14778 569 aa9.02□□□□□ -0.97
RTN4-212ENST00000461004 HIBADHP31937 336 aaKnown RBP9.02□□□□□ -0.97
RTN4-212ENST00000461004 OS9Q13438 667 aaPredicted RBP9.02□□□□□ -0.97
RTN4-212ENST00000461004 GRIK5Q16478 980 aa9.02□□□□□ -0.97
RTN4-212ENST00000461004 DACT2Q5SW24 774 aa9.02□□□□□ -0.97
RTN4-212ENST00000461004 PODNQ7Z5L7 613 aa9.02□□□□□ -0.97
RTN4-212ENST00000461004 CERS5Q8N5B7 392 aa9.02□□□□□ -0.97
RTN4-212ENST00000461004 TDRD7Q8NHU6 1098 aaKnown RBP9.02□□□□□ -0.97
RTN4-212ENST00000461004 LPIN2Q92539 896 aa9.02□□□□□ -0.97
RTN4-212ENST00000461004 BCL11AQ9H165 835 aa9.02□□□□□ -0.97
RTN4-212ENST00000461004 A0A1B0GUL7 405 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 EGFRP00533 1210 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 F12P00748 615 aaPredicted RBP9.01□□□□□ -0.97
RTN4-212ENST00000461004 SLC5A1P13866 664 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 VEGFAP15692 232 aaPredicted RBP9.01□□□□□ -0.97
RTN4-212ENST00000461004 PHKA1P46020 1223 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 HIRAP54198 1017 aaPredicted RBP9.01□□□□□ -0.97
RTN4-212ENST00000461004 TNIP1Q15025 636 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 PTPRNQ16849 979 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 TTLL5Q6EMB2 1281 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 ZNF804AQ7Z570 1209 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 NEUROD6Q96NK8 337 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 GMLQ99445 158 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 TAF1DQ9H5J8 278 aaPredicted RBP9.01□□□□□ -0.97
RTN4-212ENST00000461004 IL1RAPL2Q9NP60 686 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 TLR7Q9NYK1 1049 aaKnown RBP9.01□□□□□ -0.97
RTN4-212ENST00000461004 GPRC5DQ9NZD1 345 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 MAP10Q9P2G4 905 aa9.01□□□□□ -0.97
RTN4-212ENST00000461004 CNOT7Q9UIV1 285 aaKnown RBP9.01□□□□□ -0.97
RTN4-212ENST00000461004 WDR90Q96KV7 1748 aa9□□□□□ -0.97
RTN4-212ENST00000461004 SMARCA5O60264 1052 aaPredicted RBP9□□□□□ -0.97
RTN4-212ENST00000461004 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
RTN4-212ENST00000461004 EPHX2P34913 555 aa9□□□□□ -0.97
RTN4-212ENST00000461004 CHAF1AQ13111 956 aaPredicted RBP9□□□□□ -0.97
RTN4-212ENST00000461004 NR6A1Q15406 480 aa9□□□□□ -0.97
RTN4-212ENST00000461004 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
RTN4-212ENST00000461004 TNNI3KQ59H18 835 aa9□□□□□ -0.97
RTN4-212ENST00000461004 STRIP1Q5VSL9 837 aa9□□□□□ -0.97
RTN4-212ENST00000461004 CCDC102BQ68D86 513 aa9□□□□□ -0.97
RTN4-212ENST00000461004 RHPN1Q8TCX5 695 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms