RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 MCTP1Q6DN14 999 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 BHMTQ93088 406 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 SUSD3Q96L08 255 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 JPH1Q9HDC5 661 aaPredicted RBP7.45□□□□□ -1.22
PTPN12-209ENST00000460731 NAGPAQ9UK23 515 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 SPG7Q9UQ90 795 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 EP400Q96L91 3159 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 WNK3Q9BYP7 1800 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 PHKG2P15735 406 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 TMPOP42166 694 aaKnown RBP7.44□□□□□ -1.22
PTPN12-209ENST00000460731 PSMA6P60900 246 aaKnown RBP7.44□□□□□ -1.22
PTPN12-209ENST00000460731 NCOA4Q13772 614 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 DDB1Q16531 1140 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 CCDC27Q2M243 656 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 MARCH10Q8NA82 808 aaPredicted RBP7.44□□□□□ -1.22
PTPN12-209ENST00000460731 GAS2L2Q8NHY3 880 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 USP35Q9P2H5 1018 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 CEMIPQ8WUJ3 1361 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 TNS2Q63HR2 1409 aa7.44□□□□□ -1.22
PTPN12-209ENST00000460731 ZBTB7BO15156 539 aaPredicted RBP7.43□□□□□ -1.22
PTPN12-209ENST00000460731 SKIP12755 728 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 NFE2L2Q16236 605 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 AKAP4Q5JQC9 854 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 DMRTC2Q8IXT2 367 aaPredicted RBP7.43□□□□□ -1.22
PTPN12-209ENST00000460731 IFNL2Q8IZJ0 200 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 NUDT8Q8WV74 236 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 PHACTR1Q9C0D0 580 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 ALG2Q9H553 416 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 CCDC9Q9Y3X0 531 aaKnown RBP7.43□□□□□ -1.22
PTPN12-209ENST00000460731 PCDH11XQ9BZA7 1347 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 PCDH11YQ9BZA8 1340 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 SHANK3Q9BYB0 1731 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 RGS12O14924 1447 aa7.43□□□□□ -1.22
PTPN12-209ENST00000460731 LRRC37A3O60309 1634 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 ERVV-2B6SEH9 535 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 APAF1O14727 1248 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 HSP90AB1P08238 724 aaKnown RBP7.42□□□□□ -1.22
PTPN12-209ENST00000460731 PSAPL1Q6NUJ1 521 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 KRT27Q7Z3Y8 459 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 DTWD1Q8N5C7 304 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 IL17REQ8NFR9 667 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 WFDC12Q8WWY7 111 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 UBE2OQ9C0C9 1292 aaKnown RBP7.42□□□□□ -1.22
PTPN12-209ENST00000460731 TSPAN10Q9H1Z9 355 aaPredicted RBP7.42□□□□□ -1.22
PTPN12-209ENST00000460731 DNAJB12Q9NXW2 375 aaKnown RBP7.42□□□□□ -1.22
PTPN12-209ENST00000460731 HCN4Q9Y3Q4 1203 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 ZNF521Q96K83 1311 aa7.42□□□□□ -1.22
PTPN12-209ENST00000460731 GNAT3A8MTJ3 354 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 NOS3P29474 1203 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 ZNF530Q6P9A1 599 aaPredicted RBP7.41□□□□□ -1.22
PTPN12-209ENST00000460731 FAM196AQ6ZSG2 479 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 FBXO11Q86XK2 927 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 FAM9BQ8IZU0 186 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 GSX2Q9BZM3 304 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 BABAM1Q9NWV8 329 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 KIAA1024Q9UPX6 916 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 BRWD3Q6RI45 1802 aa7.41□□□□□ -1.22
PTPN12-209ENST00000460731 KAT6BQ8WYB5 2073 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 RNMTO43148 476 aaKnown RBP7.4□□□□□ -1.22
PTPN12-209ENST00000460731 ZNF853P0CG23 659 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 RIPK4P57078 832 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 PDE3BQ13370 1112 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 GRIK5Q16478 980 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 BTLAQ7Z6A9 289 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 WWC1Q8IX03 1113 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 CCDC146Q8IYE0 955 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 LGR6Q9HBX8 967 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 MAP3K5Q99683 1374 aa7.4□□□□□ -1.22
PTPN12-209ENST00000460731 KDM6AO15550 1401 aaPredicted RBP7.4□□□□□ -1.22
PTPN12-209ENST00000460731 MRC1P22897 1456 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 IL16Q14005 1332 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 MAPK8IP3Q9UPT6 1336 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 USP17L5A8MUK1 530 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 M0R2N6 131 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 NEFMP07197 916 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 LMOD3Q0VAK6 560 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 C1orf141Q5JVX7 400 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 MSL1Q68DK7 614 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 SLC51AQ86UW1 340 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 WDR63Q8IWG1 891 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 DDX54Q8TDD1 881 aaKnown RBP7.39□□□□□ -1.23
PTPN12-209ENST00000460731 FMNL2Q96PY5 1086 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 DLG5Q8TDM6 1919 aa7.39□□□□□ -1.23
PTPN12-209ENST00000460731 CHL1O00533 1208 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 C21orf2O43822 256 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
PTPN12-209ENST00000460731 IREB2P48200 963 aaKnown RBP7.38□□□□□ -1.23
PTPN12-209ENST00000460731 TBC1D8BQ0IIM8 1120 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 MPRIPQ6WCQ1 1025 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 PRR23CQ6ZRP0 262 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 TRMT2AQ8IZ69 625 aaKnown RBP7.38□□□□□ -1.23
PTPN12-209ENST00000460731 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 TPCN2Q8NHX9 752 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 MEGF10Q96KG7 1140 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 SLC52A2Q9HAB3 445 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 SBF2Q86WG5 1849 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 SCN11AQ9UI33 1791 aa7.38□□□□□ -1.23
PTPN12-209ENST00000460731 HEG1Q9ULI3 1381 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms