RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 AP4E1Q9UPM8 1137 aa5.79□□□□□ -1.48
RFC4-211ENST00000460408 ECEL1O95672 775 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 B3GALT4O96024 378 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 FUT4P22083 530 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 DAB2P98082 770 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 ATP2B2Q01814 1243 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 MRPL58Q14197 206 aaKnown RBP5.78□□□□□ -1.48
RFC4-211ENST00000460408 ZNF124Q15973 351 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 CYP27C1Q4G0S4 372 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 FBLN7Q53RD9 439 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 GALNT12Q8IXK2 581 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 GLIS3Q8NEA6 775 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 DDX54Q8TDD1 881 aaKnown RBP5.78□□□□□ -1.48
RFC4-211ENST00000460408 CCDC74AQ96AQ1 378 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 CORO1BQ9BR76 489 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 LIN7BQ9HAP6 207 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 NPHS2Q9NP85 383 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 PARP2Q9UGN5 583 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 DAGLAQ9Y4D2 1042 aa5.78□□□□□ -1.48
RFC4-211ENST00000460408 AOC2O75106 756 aa5.77□□□□□ -1.49
RFC4-211ENST00000460408 FARP2O94887 1054 aaPredicted RBP5.77□□□□□ -1.49
RFC4-211ENST00000460408 POLR3DP05423 398 aaPredicted RBP5.77□□□□□ -1.49
RFC4-211ENST00000460408 GNA15P30679 374 aa5.77□□□□□ -1.49
RFC4-211ENST00000460408 BNIP3Q12983 259 aa5.77□□□□□ -1.49
RFC4-211ENST00000460408 PI16Q6UXB8 463 aa5.77□□□□□ -1.49
RFC4-211ENST00000460408 SPOCD1Q6ZMY3 1216 aa5.77□□□□□ -1.49
RFC4-211ENST00000460408 TMC4Q7Z404 712 aa5.77□□□□□ -1.49
RFC4-211ENST00000460408 FAM161BQ96MY7 647 aa5.77□□□□□ -1.49
RFC4-211ENST00000460408 E9PSI1 815 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 RECKO95980 971 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 CD8BP10966 210 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 PLD6Q8N2A8 252 aaKnown RBP5.76□□□□□ -1.49
RFC4-211ENST00000460408 NETO1Q8TDF5 533 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 EPS8L3Q8TE67 593 aaKnown RBP5.76□□□□□ -1.49
RFC4-211ENST00000460408 TMEM40Q8WWA1 233 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 FAM168AQ92567 244 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 WDR18Q9BV38 432 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 IGSF5Q9NSI5 407 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 MBNL3Q9NUK0 354 aaKnown RBP5.76□□□□□ -1.49
RFC4-211ENST00000460408 VAV3Q9UKW4 847 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 PPP1R9AQ9ULJ8 1098 aa5.76□□□□□ -1.49
RFC4-211ENST00000460408 RNASE1P07998 156 aaKnown RBP5.75□□□□□ -1.49
RFC4-211ENST00000460408 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.75□□□□□ -1.49
RFC4-211ENST00000460408 LDLRAD1Q5T700 205 aa5.75□□□□□ -1.49
RFC4-211ENST00000460408 FRMD6Q96NE9 622 aa5.75□□□□□ -1.49
RFC4-211ENST00000460408 ZNF576Q9H609 170 aa5.75□□□□□ -1.49
RFC4-211ENST00000460408 RC3H2Q9HBD1 1191 aaKnown RBP5.75□□□□□ -1.49
RFC4-211ENST00000460408 LGR6Q9HBX8 967 aa5.75□□□□□ -1.49
RFC4-211ENST00000460408 ADAMTS6Q9UKP5 1117 aa5.75□□□□□ -1.49
RFC4-211ENST00000460408 ITPKAP23677 461 aa5.74□□□□□ -1.49
RFC4-211ENST00000460408 XPCQ01831 940 aaPredicted RBP5.74□□□□□ -1.49
RFC4-211ENST00000460408 PRKCQQ04759 706 aa5.74□□□□□ -1.49
RFC4-211ENST00000460408 AP3B2Q13367 1082 aa5.74□□□□□ -1.49
RFC4-211ENST00000460408 KIAA0319Q5VV43 1072 aa5.74□□□□□ -1.49
RFC4-211ENST00000460408 OSBPL7Q9BZF2 842 aa5.74□□□□□ -1.49
RFC4-211ENST00000460408 CRIM1Q9NZV1 1036 aa5.74□□□□□ -1.49
RFC4-211ENST00000460408 TMPRSS2O15393 492 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 FAM87AP0C7U9 286 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 PSMD2Q13200 908 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 CDK5R2Q13319 367 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 GRM2Q14416 872 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 PDE3AQ14432 1141 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 PKN1Q16512 942 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 FAM181AQ8N9Y4 354 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 MKNK2Q9HBH9 465 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 SPG7Q9UQ90 795 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 AK5Q9Y6K8 562 aa5.73□□□□□ -1.49
RFC4-211ENST00000460408 GIPC1O14908 333 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 SORBS3O60504 671 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 CTSHP09668 335 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 PTPN12Q05209 780 aaKnown RBP5.72□□□□□ -1.49
RFC4-211ENST00000460408 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 PRPF40BQ6NWY9 871 aaKnown RBP5.72□□□□□ -1.49
RFC4-211ENST00000460408 KSR1Q8IVT5 923 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 LRRN4CLQ8ND94 238 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 PI4K2BQ8TCG2 481 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 BACH2Q9BYV9 841 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 ATXN3LQ9H3M9 355 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 C12orf49Q9H741 205 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 NLRP2Q9NX02 1062 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 U3KQE9 123 aa5.72□□□□□ -1.49
RFC4-211ENST00000460408 MESP2Q0VG99 397 aa5.71□□□□□ -1.5
RFC4-211ENST00000460408 IFI16Q16666 785 aaKnown RBP5.71□□□□□ -1.5
RFC4-211ENST00000460408 BHLHE22Q8NFJ8 381 aaPredicted RBP5.71□□□□□ -1.5
RFC4-211ENST00000460408 FANCD2OSQ96PS1 177 aa5.71□□□□□ -1.5
RFC4-211ENST00000460408 BCO2Q9BYV7 579 aa5.71□□□□□ -1.5
RFC4-211ENST00000460408 SRCIN1Q9C0H9 1055 aa5.71□□□□□ -1.5
RFC4-211ENST00000460408 MRS2Q9HD23 443 aa5.71□□□□□ -1.5
RFC4-211ENST00000460408 LIG1P18858 919 aa5.7□□□□□ -1.5
RFC4-211ENST00000460408 EIF4BP23588 611 aaKnown RBP5.7□□□□□ -1.5
RFC4-211ENST00000460408 CD96P40200 585 aa5.7□□□□□ -1.5
RFC4-211ENST00000460408 ID3Q02535 119 aa5.7□□□□□ -1.5
RFC4-211ENST00000460408 AOC3Q16853 763 aa5.7□□□□□ -1.5
RFC4-211ENST00000460408 RPS26P11Q5JNZ5 115 aaPredicted RBP5.7□□□□□ -1.5
RFC4-211ENST00000460408 NXPE4Q6UWF7 544 aa5.7□□□□□ -1.5
RFC4-211ENST00000460408 SMYD4Q8IYR2 804 aaPredicted RBP5.7□□□□□ -1.5
RFC4-211ENST00000460408 WDR89Q96FK6 387 aaPredicted RBP5.7□□□□□ -1.5
RFC4-211ENST00000460408 CRELD1Q96HD1 420 aa5.7□□□□□ -1.5
RFC4-211ENST00000460408 FAM84AQ96KN4 292 aa5.7□□□□□ -1.5
RFC4-211ENST00000460408 HRASLS5Q96KN8 279 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms