RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 MS4A4AQ96JQ5 239 aa28.98■■■□□ 2.23
HOXB3-202ENST00000460160 R3HDMLQ9H3Y0 253 aa28.98■■■□□ 2.23
HOXB3-202ENST00000460160 ZNF112Q9UJU3 913 aa28.98■■■□□ 2.23
HOXB3-202ENST00000460160 TESPA1A2RU30 521 aaPredicted RBP28.97■■■□□ 2.23
HOXB3-202ENST00000460160 INPP5BP32019 993 aa28.97■■■□□ 2.23
HOXB3-202ENST00000460160 PICALMQ13492 652 aa28.97■■■□□ 2.23
HOXB3-202ENST00000460160 ABHD8Q96I13 439 aa28.97■■■□□ 2.23
HOXB3-202ENST00000460160 MCOLN1Q9GZU1 580 aa28.97■■■□□ 2.23
HOXB3-202ENST00000460160 PIH1D3Q9NQM4 214 aaKnown RBP28.97■■■□□ 2.23
HOXB3-202ENST00000460160 PTPN18Q99952 460 aa28.96■■■□□ 2.23
HOXB3-202ENST00000460160 DGKZQ13574 1117 aa28.95■■■□□ 2.23
HOXB3-202ENST00000460160 NOM1Q5C9Z4 860 aaKnown RBP28.95■■■□□ 2.23
HOXB3-202ENST00000460160 NAA16Q6N069 864 aaPredicted RBP28.95■■■□□ 2.23
HOXB3-202ENST00000460160 ERO1BQ86YB8 467 aa28.95■■■□□ 2.23
HOXB3-202ENST00000460160 CDK5RAP2Q96SN8 1893 aa28.95■■■□□ 2.22
HOXB3-202ENST00000460160 DDTLA6NHG4 134 aaPredicted RBP28.94■■■□□ 2.22
HOXB3-202ENST00000460160 NPM3O75607 178 aaKnown RBP28.94■■■□□ 2.22
HOXB3-202ENST00000460160 MAP4K4O95819 1239 aaPredicted RBP28.94■■■□□ 2.22
HOXB3-202ENST00000460160 ZNF296Q8WUU4 475 aaPredicted RBP28.94■■■□□ 2.22
HOXB3-202ENST00000460160 YTHDC1Q96MU7 727 aaKnown RBP28.94■■■□□ 2.22
HOXB3-202ENST00000460160 GPR25O00155 361 aa28.94■■■□□ 2.22
HOXB3-202ENST00000460160 RAB11FIP3O75154 756 aa28.94■■■□□ 2.22
HOXB3-202ENST00000460160 ZSCAN29Q8IWY8 852 aaPredicted RBP28.94■■■□□ 2.22
HOXB3-202ENST00000460160 CLASRPQ8N2M8 674 aaKnown RBP28.94■■■□□ 2.22
HOXB3-202ENST00000460160 NDUFB9Q9Y6M9 179 aa28.94■■■□□ 2.22
HOXB3-202ENST00000460160 GTF2A2P52657 109 aa28.93■■■□□ 2.22
HOXB3-202ENST00000460160 ADGRA1Q86SQ6 560 aa28.93■■■□□ 2.22
HOXB3-202ENST00000460160 BRI3BPQ8WY22 251 aa28.93■■■□□ 2.22
HOXB3-202ENST00000460160 IGSF3O75054 1194 aa28.92■■■□□ 2.22
HOXB3-202ENST00000460160 FOCADQ5VW36 1801 aa28.91■■■□□ 2.22
HOXB3-202ENST00000460160 IRF6O14896 467 aa28.91■■■□□ 2.22
HOXB3-202ENST00000460160 MAP3K10Q02779 954 aa28.91■■■□□ 2.22
HOXB3-202ENST00000460160 PPIL2Q13356 520 aa28.91■■■□□ 2.22
HOXB3-202ENST00000460160 OTUD7BQ6GQQ9 843 aa28.91■■■□□ 2.22
HOXB3-202ENST00000460160 TEX11Q8IYF3 940 aa28.91■■■□□ 2.22
HOXB3-202ENST00000460160 SH3RF3Q8TEJ3 882 aaPredicted RBP28.91■■■□□ 2.22
HOXB3-202ENST00000460160 AATFQ9NY61 560 aaKnown RBP eCLIP28.91■■■□□ 2.22
HOXB3-202ENST00000460160 CCL15-CCL14A0A0B4J2E2 113 aa28.9■■■□□ 2.22
HOXB3-202ENST00000460160 PHF20L1A8MW92 1017 aa28.9■■■□□ 2.22
HOXB3-202ENST00000460160 CCL15Q16663 113 aa28.9■■■□□ 2.22
HOXB3-202ENST00000460160 NOL9Q5SY16 702 aaKnown RBP28.9■■■□□ 2.22
HOXB3-202ENST00000460160 NOL10Q9BSC4 688 aaKnown RBP28.9■■■□□ 2.22
HOXB3-202ENST00000460160 ANTXR1Q9H6X2 564 aa28.9■■■□□ 2.22
HOXB3-202ENST00000460160 COL2A1P02458 1487 aaPredicted RBP28.9■■■□□ 2.22
HOXB3-202ENST00000460160 SLURP2P0DP57 97 aa28.89■■■□□ 2.22
HOXB3-202ENST00000460160 PPP4CP60510 307 aa28.89■■■□□ 2.22
HOXB3-202ENST00000460160 HTTP42858 3142 aa28.89■■■□□ 2.22
HOXB3-202ENST00000460160 IDH1O75874 414 aaKnown RBP28.89■■■□□ 2.21
HOXB3-202ENST00000460160 BAG3O95817 575 aa28.89■■■□□ 2.21
HOXB3-202ENST00000460160 IFIT2P09913 472 aaKnown RBP28.89■■■□□ 2.21
HOXB3-202ENST00000460160 PPATQ06203 517 aa28.89■■■□□ 2.21
HOXB3-202ENST00000460160 CTU1Q7Z7A3 348 aaKnown RBP28.89■■■□□ 2.21
HOXB3-202ENST00000460160 OSBPL5Q9H0X9 879 aaPredicted RBP28.89■■■□□ 2.21
HOXB3-202ENST00000460160 RRP1P56182 461 aaKnown RBP28.88■■■□□ 2.21
HOXB3-202ENST00000460160 CRHR2Q13324 411 aa28.88■■■□□ 2.21
HOXB3-202ENST00000460160 BCL11AQ9H165 835 aa28.88■■■□□ 2.21
HOXB3-202ENST00000460160 FKTNO75072 461 aa28.87■■■□□ 2.21
HOXB3-202ENST00000460160 PLCG2P16885 1265 aa28.87■■■□□ 2.21
HOXB3-202ENST00000460160 SNAPC2Q13487 334 aa28.87■■■□□ 2.21
HOXB3-202ENST00000460160 DOCK1Q14185 1865 aa28.86■■■□□ 2.21
HOXB3-202ENST00000460160 CETPP11597 493 aa28.86■■■□□ 2.21
HOXB3-202ENST00000460160 CYP7A1P22680 504 aa28.86■■■□□ 2.21
HOXB3-202ENST00000460160 FAM43AQ8N2R8 423 aa28.85■■■□□ 2.21
HOXB3-202ENST00000460160 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.85■■■□□ 2.21
HOXB3-202ENST00000460160 SIPA1L1O43166 1804 aa28.85■■■□□ 2.21
HOXB3-202ENST00000460160 MAGEB6Q8N7X4 407 aa28.84■■■□□ 2.21
HOXB3-202ENST00000460160 KCNH4Q9UQ05 1017 aa28.84■■■□□ 2.21
HOXB3-202ENST00000460160 TBC1D12O60347 775 aa28.84■■■□□ 2.21
HOXB3-202ENST00000460160 MAP3K12Q12852 859 aa28.84■■■□□ 2.21
HOXB3-202ENST00000460160 SCYL3Q8IZE3 742 aa28.84■■■□□ 2.21
HOXB3-202ENST00000460160 PHIPQ8WWQ0 1821 aa28.83■■■□□ 2.21
HOXB3-202ENST00000460160 FAM196BA6NMK8 535 aa28.83■■■□□ 2.21
HOXB3-202ENST00000460160 DYNLL1P63167 89 aaKnown RBP28.83■■■□□ 2.21
HOXB3-202ENST00000460160 TGFBRAP1Q8WUH2 860 aa28.83■■■□□ 2.21
HOXB3-202ENST00000460160 LRRCC1Q9C099 1032 aa28.83■■■□□ 2.21
HOXB3-202ENST00000460160 BTBD19C9JJ37 291 aa28.82■■■□□ 2.2
HOXB3-202ENST00000460160 MAPKAPK5Q8IW41 473 aa28.82■■■□□ 2.2
HOXB3-202ENST00000460160 FLT1P17948 1338 aa28.82■■■□□ 2.2
HOXB3-202ENST00000460160 PTPRFP10586 1907 aa28.81■■■□□ 2.2
HOXB3-202ENST00000460160 CTNND1O60716 968 aaKnown RBP28.81■■■□□ 2.2
HOXB3-202ENST00000460160 TTF1Q15361 905 aaPredicted RBP28.81■■■□□ 2.2
HOXB3-202ENST00000460160 TAF1CQ15572 869 aaPredicted RBP28.81■■■□□ 2.2
HOXB3-202ENST00000460160 MIGA1Q8NAN2 632 aa28.81■■■□□ 2.2
HOXB3-202ENST00000460160 CENPFP49454 3210 aa28.8■■■□□ 2.2
HOXB3-202ENST00000460160 CCDC85CA6NKD9 419 aa28.8■■■□□ 2.2
HOXB3-202ENST00000460160 SMARCA5O60264 1052 aaPredicted RBP28.8■■■□□ 2.2
HOXB3-202ENST00000460160 PTPRAP18433 802 aa28.8■■■□□ 2.2
HOXB3-202ENST00000460160 TMED8Q6PL24 325 aaPredicted RBP28.8■■■□□ 2.2
HOXB3-202ENST00000460160 DNAJC2Q99543 621 aaKnown RBP28.8■■■□□ 2.2
HOXB3-202ENST00000460160 DCTPP1Q9H773 170 aa28.8■■■□□ 2.2
HOXB3-202ENST00000460160 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.8■■■□□ 2.2
HOXB3-202ENST00000460160 PICK1Q9NRD5 415 aa28.8■■■□□ 2.2
HOXB3-202ENST00000460160 ATAD5Q96QE3 1844 aa28.8■■■□□ 2.2
HOXB3-202ENST00000460160 MYH1P12882 1939 aa28.8■■■□□ 2.2
HOXB3-202ENST00000460160 DHX36Q9H2U1 1008 aaKnown RBP28.79■■■□□ 2.2
HOXB3-202ENST00000460160 ZCCHC17Q9NP64 241 aaKnown RBP28.79■■■□□ 2.2
HOXB3-202ENST00000460160 PCDHB15Q9Y5E8 787 aa28.79■■■□□ 2.2
HOXB3-202ENST00000460160 GOLIM4O00461 696 aa28.79■■■□□ 2.2
HOXB3-202ENST00000460160 ATP5JP18859 108 aa28.79■■■□□ 2.2
HOXB3-202ENST00000460160 MOGSQ13724 837 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms