RNA–Protein interactions for RNA: ENST00000460123.1

GRIA3-201, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 2

Gene GRIA3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-201ENST00000460123 SH2B1Q9NRF2 756 aaPredicted RBP13.52□□□□□ -0.25
GRIA3-201ENST00000460123 MYH6P13533 1939 aa13.52□□□□□ -0.25
GRIA3-201ENST00000460123 MINDY4BA8MYZ0 360 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 NFKBIEO00221 500 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 MCM5P33992 734 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
GRIA3-201ENST00000460123 Q6ZUG5 572 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 AMOTL1Q8IY63 956 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 TEX11Q8IYF3 940 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 TCEANC2Q96MN5 208 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 KRT23Q9C075 422 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
GRIA3-201ENST00000460123 ZNRF3Q9ULT6 936 aa13.51□□□□□ -0.25
GRIA3-201ENST00000460123 NEDD4P46934 1319 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 SLC3A2P08195 630 aaKnown RBP13.5□□□□□ -0.25
GRIA3-201ENST00000460123 CRKP46108 304 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 RHBDL3P58872 404 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 FGD1P98174 961 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 CTDSPL2Q05D32 466 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 COL9A3Q14050 684 aaPredicted RBP13.5□□□□□ -0.25
GRIA3-201ENST00000460123 TOB2Q14106 344 aaPredicted RBP13.5□□□□□ -0.25
GRIA3-201ENST00000460123 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
GRIA3-201ENST00000460123 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 MFSD6Q6ZSS7 791 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 KIAA0825Q8IV33 1275 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 FBXL16Q8N461 479 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 TGFBRAP1Q8WUH2 860 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
GRIA3-201ENST00000460123 ZDHHC15Q96MV8 337 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 MKRN1Q9UHC7 482 aaKnown RBP13.5□□□□□ -0.25
GRIA3-201ENST00000460123 SIPA1L1O43166 1804 aa13.5□□□□□ -0.25
GRIA3-201ENST00000460123 ROBO3Q96MS0 1386 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 B4E1Z4 1266 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 USP17L12C9JPN9 530 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 USP17L21D6R901 530 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 PRC1O43663 620 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 VIL1P09327 827 aaKnown RBP13.49□□□□□ -0.25
GRIA3-201ENST00000460123 NT5C2P49902 561 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 SCNN1DP51172 638 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 JDP2Q8WYK2 163 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 FHDC1Q9C0D6 1143 aaPredicted RBP13.49□□□□□ -0.25
GRIA3-201ENST00000460123 CWC22Q9HCG8 908 aaKnown RBP13.49□□□□□ -0.25
GRIA3-201ENST00000460123 MCM9Q9NXL9 1143 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 SERPINA10Q9UK55 444 aa13.49□□□□□ -0.25
GRIA3-201ENST00000460123 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
GRIA3-201ENST00000460123 FLT1P17948 1338 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 PSMD14O00487 310 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 LARGE1O95461 756 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 ANTXR2P58335 489 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 MAPKAPK5Q8IW41 473 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 TMEM87BQ96K49 555 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 LRRC2Q9BYS8 371 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 HDAC9Q9UKV0 1011 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
GRIA3-201ENST00000460123 ORC4O43929 436 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 CAPN15O75808 1086 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 RAD17O75943 681 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 FGRP09769 529 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 DDIT3P35638 169 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 RASSF7Q02833 373 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 ME3Q16798 604 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 C12orf60Q5U649 245 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 CYB5R4Q7L1T6 521 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 BRF1Q92994 677 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
GRIA3-201ENST00000460123 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 USP40Q9NVE5 1235 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
GRIA3-201ENST00000460123 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
GRIA3-201ENST00000460123 TACC3Q9Y6A5 838 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
GRIA3-201ENST00000460123 CYP2D7A0A087X1C5 515 aa13.46□□□□□ -0.25
GRIA3-201ENST00000460123 POLR3DP05423 398 aaPredicted RBP13.46□□□□□ -0.25
GRIA3-201ENST00000460123 USP17L8P0C7I0 530 aa13.46□□□□□ -0.25
GRIA3-201ENST00000460123 PDE4BQ07343 736 aa13.46□□□□□ -0.25
GRIA3-201ENST00000460123 RRP12Q5JTH9 1297 aaKnown RBP13.46□□□□□ -0.25
GRIA3-201ENST00000460123 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.25
GRIA3-201ENST00000460123 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.25
GRIA3-201ENST00000460123 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
GRIA3-201ENST00000460123 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
GRIA3-201ENST00000460123 ESR2Q92731 530 aa13.46□□□□□ -0.25
GRIA3-201ENST00000460123 GMLQ99445 158 aa13.46□□□□□ -0.25
GRIA3-201ENST00000460123 GREB1LQ9C091 1923 aaPredicted RBP13.46□□□□□ -0.25
GRIA3-201ENST00000460123 TCHHQ07283 1943 aa13.45□□□□□ -0.26
GRIA3-201ENST00000460123 SH2B2O14492 632 aaPredicted RBP13.45□□□□□ -0.26
GRIA3-201ENST00000460123 KDM4AO75164 1064 aa13.45□□□□□ -0.26
GRIA3-201ENST00000460123 CYP2D6P10635 497 aa13.45□□□□□ -0.26
GRIA3-201ENST00000460123 MMP14P50281 582 aa13.45□□□□□ -0.26
GRIA3-201ENST00000460123 RBM5P52756 815 aaKnown RBP eCLIP13.45□□□□□ -0.26
GRIA3-201ENST00000460123 EVCP57679 992 aa13.45□□□□□ -0.26
GRIA3-201ENST00000460123 CXCL9Q07325 125 aa13.45□□□□□ -0.26
GRIA3-201ENST00000460123 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
GRIA3-201ENST00000460123 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
GRIA3-201ENST00000460123 TNIP1Q15025 636 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms