RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 ZKSCAN4Q969J2 545 aaPredicted RBP20.2■□□□□ 0.82
SHANK2-213ENST00000460048 ABHD8Q96I13 439 aa20.2■□□□□ 0.82
SHANK2-213ENST00000460048 MS4A4AQ96JQ5 239 aa20.2■□□□□ 0.82
SHANK2-213ENST00000460048 IGSF3O75054 1194 aa20.19■□□□□ 0.82
SHANK2-213ENST00000460048 NPM3O75607 178 aaKnown RBP20.19■□□□□ 0.82
SHANK2-213ENST00000460048 AACSQ86V21 672 aa20.19■□□□□ 0.82
SHANK2-213ENST00000460048 ERO1BQ86YB8 467 aa20.19■□□□□ 0.82
SHANK2-213ENST00000460048 KIF1BPQ96EK5 621 aa20.19■□□□□ 0.82
SHANK2-213ENST00000460048 PTPN18Q99952 460 aa20.19■□□□□ 0.82
SHANK2-213ENST00000460048 MCOLN1Q9GZU1 580 aa20.19■□□□□ 0.82
SHANK2-213ENST00000460048 R3HDMLQ9H3Y0 253 aa20.19■□□□□ 0.82
SHANK2-213ENST00000460048 IL1RAPL2Q9NP60 686 aa20.19■□□□□ 0.82
SHANK2-213ENST00000460048 GPR25O00155 361 aa20.18■□□□□ 0.82
SHANK2-213ENST00000460048 INPP5BP32019 993 aa20.18■□□□□ 0.82
SHANK2-213ENST00000460048 DGKZQ13574 1117 aa20.18■□□□□ 0.82
SHANK2-213ENST00000460048 OTUD5Q96G74 571 aa20.18■□□□□ 0.82
SHANK2-213ENST00000460048 PIH1D3Q9NQM4 214 aaKnown RBP20.18■□□□□ 0.82
SHANK2-213ENST00000460048 DOCK1Q14185 1865 aa20.18■□□□□ 0.82
SHANK2-213ENST00000460048 DDTLA6NHG4 134 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-213ENST00000460048 RAB11FIP3O75154 756 aa20.17■□□□□ 0.82
SHANK2-213ENST00000460048 MAP3K10Q02779 954 aa20.17■□□□□ 0.82
SHANK2-213ENST00000460048 NAA16Q6N069 864 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-213ENST00000460048 ZNF296Q8WUU4 475 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-213ENST00000460048 COL2A1P02458 1487 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-213ENST00000460048 SIPA1L1O43166 1804 aa20.16■□□□□ 0.82
SHANK2-213ENST00000460048 PHIPQ8WWQ0 1821 aa20.16■□□□□ 0.82
SHANK2-213ENST00000460048 GTF2A2P52657 109 aa20.16■□□□□ 0.82
SHANK2-213ENST00000460048 PICALMQ13492 652 aa20.16■□□□□ 0.82
SHANK2-213ENST00000460048 NOL9Q5SY16 702 aaKnown RBP20.16■□□□□ 0.82
SHANK2-213ENST00000460048 CLASRPQ8N2M8 674 aaKnown RBP20.16■□□□□ 0.82
SHANK2-213ENST00000460048 BRI3BPQ8WY22 251 aa20.16■□□□□ 0.82
SHANK2-213ENST00000460048 PHF20L1A8MW92 1017 aa20.15■□□□□ 0.82
SHANK2-213ENST00000460048 PPP4CP60510 307 aa20.15■□□□□ 0.82
SHANK2-213ENST00000460048 PPIL2Q13356 520 aa20.15■□□□□ 0.82
SHANK2-213ENST00000460048 OTUD7BQ6GQQ9 843 aa20.15■□□□□ 0.82
SHANK2-213ENST00000460048 ADGRA1Q86SQ6 560 aa20.15■□□□□ 0.82
SHANK2-213ENST00000460048 ZSCAN29Q8IWY8 852 aaPredicted RBP20.15■□□□□ 0.82
SHANK2-213ENST00000460048 ATAD5Q96QE3 1844 aa20.15■□□□□ 0.82
SHANK2-213ENST00000460048 PTPRFP10586 1907 aa20.15■□□□□ 0.82
SHANK2-213ENST00000460048 CCL15-CCL14A0A0B4J2E2 113 aa20.14■□□□□ 0.81
SHANK2-213ENST00000460048 APBB1O00213 710 aa20.14■□□□□ 0.81
SHANK2-213ENST00000460048 IRF6O14896 467 aa20.14■□□□□ 0.81
SHANK2-213ENST00000460048 PPATQ06203 517 aa20.14■□□□□ 0.81
SHANK2-213ENST00000460048 CCL15Q16663 113 aa20.14■□□□□ 0.81
SHANK2-213ENST00000460048 CTU1Q7Z7A3 348 aaKnown RBP20.14■□□□□ 0.81
SHANK2-213ENST00000460048 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
SHANK2-213ENST00000460048 NDUFB9Q9Y6M9 179 aa20.14■□□□□ 0.81
SHANK2-213ENST00000460048 BAG3O95817 575 aa20.13■□□□□ 0.81
SHANK2-213ENST00000460048 TEX11Q8IYF3 940 aa20.13■□□□□ 0.81
SHANK2-213ENST00000460048 OSBPL5Q9H0X9 879 aaPredicted RBP20.13■□□□□ 0.81
SHANK2-213ENST00000460048 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
SHANK2-213ENST00000460048 AATFQ9NY61 560 aaKnown RBP eCLIP20.13■□□□□ 0.81
SHANK2-213ENST00000460048 MYH1P12882 1939 aa20.13■□□□□ 0.81
SHANK2-213ENST00000460048 TBC1D12O60347 775 aa20.12■□□□□ 0.81
SHANK2-213ENST00000460048 FKTNO75072 461 aa20.12■□□□□ 0.81
SHANK2-213ENST00000460048 SLURP2P0DP57 97 aa20.12■□□□□ 0.81
SHANK2-213ENST00000460048 CRHR2Q13324 411 aa20.12■□□□□ 0.81
SHANK2-213ENST00000460048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.12■□□□□ 0.81
SHANK2-213ENST00000460048 NOL10Q9BSC4 688 aaKnown RBP20.12■□□□□ 0.81
SHANK2-213ENST00000460048 CETPP11597 493 aa20.11■□□□□ 0.81
SHANK2-213ENST00000460048 PLCG2P16885 1265 aa20.11■□□□□ 0.81
SHANK2-213ENST00000460048 SNAPC2Q13487 334 aa20.11■□□□□ 0.81
SHANK2-213ENST00000460048 FAM43AQ8N2R8 423 aa20.11■□□□□ 0.81
SHANK2-213ENST00000460048 KCNH4Q9UQ05 1017 aa20.11■□□□□ 0.81
SHANK2-213ENST00000460048 MYH7P12883 1935 aa20.11■□□□□ 0.81
SHANK2-213ENST00000460048 IDH1O75874 414 aaKnown RBP20.1■□□□□ 0.81
SHANK2-213ENST00000460048 IFIT2P09913 472 aaKnown RBP20.1■□□□□ 0.81
SHANK2-213ENST00000460048 CYP7A1P22680 504 aa20.1■□□□□ 0.81
SHANK2-213ENST00000460048 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
SHANK2-213ENST00000460048 SCYL3Q8IZE3 742 aa20.1■□□□□ 0.81
SHANK2-213ENST00000460048 TMED8Q6PL24 325 aaPredicted RBP20.09■□□□□ 0.81
SHANK2-213ENST00000460048 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
SHANK2-213ENST00000460048 ZCCHC17Q9NP64 241 aaKnown RBP20.09■□□□□ 0.81
SHANK2-213ENST00000460048 BTBD19C9JJ37 291 aa20.08■□□□□ 0.81
SHANK2-213ENST00000460048 CTNND1O60716 968 aaKnown RBP20.08■□□□□ 0.81
SHANK2-213ENST00000460048 DYNLL1P63167 89 aaKnown RBP20.08■□□□□ 0.81
SHANK2-213ENST00000460048 MAP3K12Q12852 859 aa20.08■□□□□ 0.81
SHANK2-213ENST00000460048 TTF1Q15361 905 aaPredicted RBP20.08■□□□□ 0.81
SHANK2-213ENST00000460048 TAF1CQ15572 869 aaPredicted RBP20.08■□□□□ 0.81
SHANK2-213ENST00000460048 PKN2Q16513 984 aaKnown RBP20.08■□□□□ 0.81
SHANK2-213ENST00000460048 MAGEB6Q8N7X4 407 aa20.08■□□□□ 0.81
SHANK2-213ENST00000460048 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.81
SHANK2-213ENST00000460048 LRRCC1Q9C099 1032 aa20.08■□□□□ 0.81
SHANK2-213ENST00000460048 FLT1P17948 1338 aa20.07■□□□□ 0.8
SHANK2-213ENST00000460048 PTPRAP18433 802 aa20.07■□□□□ 0.8
SHANK2-213ENST00000460048 MOGSQ13724 837 aa20.07■□□□□ 0.8
SHANK2-213ENST00000460048 DHX36Q9H2U1 1008 aaKnown RBP20.07■□□□□ 0.8
SHANK2-213ENST00000460048 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
SHANK2-213ENST00000460048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.07■□□□□ 0.88e-7■■■■■ 36
SHANK2-213ENST00000460048 CCDC85CA6NKD9 419 aa20.06■□□□□ 0.8
SHANK2-213ENST00000460048 FAM196BA6NMK8 535 aa20.06■□□□□ 0.8
SHANK2-213ENST00000460048 CXCL11O14625 94 aa20.06■□□□□ 0.8
SHANK2-213ENST00000460048 DDX60LQ5H9U9 1706 aaKnown RBP20.06■□□□□ 0.8
SHANK2-213ENST00000460048 CERS3Q8IU89 383 aa20.06■□□□□ 0.8
SHANK2-213ENST00000460048 MAPKAPK5Q8IW41 473 aa20.06■□□□□ 0.8
SHANK2-213ENST00000460048 ZFYVE28Q9HCC9 887 aa20.06■□□□□ 0.8
SHANK2-213ENST00000460048 PICK1Q9NRD5 415 aa20.06■□□□□ 0.8
SHANK2-213ENST00000460048 SMARCA5O60264 1052 aaPredicted RBP20.05■□□□□ 0.8
SHANK2-213ENST00000460048 ATP5JP18859 108 aa20.05■□□□□ 0.8
SHANK2-213ENST00000460048 ANKRD23Q86SG2 305 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms