RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 MAST2Q6P0Q8 1798 aa25.64■■□□□ 1.69
SRM-202ENST00000459997 RHBDL3P58872 404 aa25.63■■□□□ 1.69
SRM-202ENST00000459997 PPATQ06203 517 aa25.63■■□□□ 1.69
SRM-202ENST00000459997 TAF1CQ15572 869 aaPredicted RBP25.63■■□□□ 1.69
SRM-202ENST00000459997 SH3BP5LQ7L8J4 393 aa25.63■■□□□ 1.69
SRM-202ENST00000459997 FAM43AQ8N2R8 423 aa25.63■■□□□ 1.69
SRM-202ENST00000459997 RCAN3Q9UKA8 241 aa25.63■■□□□ 1.69
SRM-202ENST00000459997 RGS19P49795 217 aa25.62■■□□□ 1.69
SRM-202ENST00000459997 FBXO46Q6PJ61 603 aaPredicted RBP25.62■■□□□ 1.69
SRM-202ENST00000459997 CCDC8Q9H0W5 538 aaPredicted RBP25.62■■□□□ 1.69
SRM-202ENST00000459997 TLR7Q9NYK1 1049 aaKnown RBP25.62■■□□□ 1.69
SRM-202ENST00000459997 DBNLQ9UJU6 430 aaKnown RBP25.62■■□□□ 1.69
SRM-202ENST00000459997 EXOC6BQ9Y2D4 811 aa25.62■■□□□ 1.69
SRM-202ENST00000459997 DDTLA6NHG4 134 aaPredicted RBP25.61■■□□□ 1.69
SRM-202ENST00000459997 NOL9Q5SY16 702 aaKnown RBP25.61■■□□□ 1.69
SRM-202ENST00000459997 EAF2Q96CJ1 260 aaPredicted RBP25.61■■□□□ 1.69
SRM-202ENST00000459997 ERO1AQ96HE7 468 aa25.61■■□□□ 1.69
SRM-202ENST00000459997 ZNF512BQ96KM6 892 aaPredicted RBP25.61■■□□□ 1.69
SRM-202ENST00000459997 ZFYVE28Q9HCC9 887 aa25.61■■□□□ 1.69
SRM-202ENST00000459997 COG6Q9Y2V7 657 aa25.61■■□□□ 1.69
SRM-202ENST00000459997 ERC1Q8IUD2 1116 aa25.6■■□□□ 1.69
SRM-202ENST00000459997 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.6■■□□□ 1.69
SRM-202ENST00000459997 CD99L2Q8TCZ2 262 aa25.6■■□□□ 1.69
SRM-202ENST00000459997 DDX19BQ9UMR2 479 aa25.6■■□□□ 1.69
SRM-202ENST00000459997 TRIM17Q9Y577 477 aa25.6■■□□□ 1.69
SRM-202ENST00000459997 BTBD19C9JJ37 291 aa25.59■■□□□ 1.69
SRM-202ENST00000459997 MAP4K4O95819 1239 aaPredicted RBP25.59■■□□□ 1.69
SRM-202ENST00000459997 CYP2E1P05181 493 aaPredicted RBP25.59■■□□□ 1.69
SRM-202ENST00000459997 SOX10P56693 466 aa25.59■■□□□ 1.69
SRM-202ENST00000459997 SP3Q02447 781 aa25.59■■□□□ 1.69
SRM-202ENST00000459997 MLLT1Q03111 559 aaPredicted RBP25.59■■□□□ 1.69
SRM-202ENST00000459997 NAA16Q6N069 864 aaPredicted RBP25.59■■□□□ 1.69
SRM-202ENST00000459997 OTOP1Q7RTM1 612 aa25.59■■□□□ 1.69
SRM-202ENST00000459997 NOL10Q9BSC4 688 aaKnown RBP25.59■■□□□ 1.69
SRM-202ENST00000459997 PHF20L1A8MW92 1017 aa25.58■■□□□ 1.69
SRM-202ENST00000459997 NPM3O75607 178 aaKnown RBP25.58■■□□□ 1.69
SRM-202ENST00000459997 ZAP70P43403 619 aa25.58■■□□□ 1.69
SRM-202ENST00000459997 ZCCHC17Q9NP64 241 aaKnown RBP25.58■■□□□ 1.69
SRM-202ENST00000459997 SLURP2P0DP57 97 aa25.57■■□□□ 1.68
SRM-202ENST00000459997 MAP3K10Q02779 954 aa25.57■■□□□ 1.68
SRM-202ENST00000459997 SCYL3Q8IZE3 742 aa25.57■■□□□ 1.68
SRM-202ENST00000459997 KCNH4Q9UQ05 1017 aa25.57■■□□□ 1.68
SRM-202ENST00000459997 MYO5AQ9Y4I1 1855 aaKnown RBP25.56■■□□□ 1.68
SRM-202ENST00000459997 HSP90AB4PQ58FF6 505 aa25.56■■□□□ 1.68
SRM-202ENST00000459997 AACSQ86V21 672 aa25.56■■□□□ 1.68
SRM-202ENST00000459997 TEX11Q8IYF3 940 aa25.56■■□□□ 1.68
SRM-202ENST00000459997 SH3RF3Q8TEJ3 882 aaPredicted RBP25.56■■□□□ 1.68
SRM-202ENST00000459997 PICK1Q9NRD5 415 aa25.56■■□□□ 1.68
SRM-202ENST00000459997 ZBTB40Q9NUA8 1239 aa25.56■■□□□ 1.68
SRM-202ENST00000459997 COL2A1P02458 1487 aaPredicted RBP25.55■■□□□ 1.68
SRM-202ENST00000459997 RPAP2Q8IXW5 612 aaPredicted RBP25.55■■□□□ 1.68
SRM-202ENST00000459997 OSBPL5Q9H0X9 879 aaPredicted RBP25.55■■□□□ 1.68
SRM-202ENST00000459997 PIH1D3Q9NQM4 214 aaKnown RBP25.55■■□□□ 1.68
SRM-202ENST00000459997 AATFQ9NY61 560 aaKnown RBP eCLIP25.55■■□□□ 1.68
SRM-202ENST00000459997 DOCK1Q14185 1865 aa25.55■■□□□ 1.68
SRM-202ENST00000459997 BAG3O95817 575 aa25.54■■□□□ 1.68
SRM-202ENST00000459997 EFCC1Q9HA90 598 aa25.54■■□□□ 1.68
SRM-202ENST00000459997 IL1RAPL2Q9NP60 686 aa25.54■■□□□ 1.68
SRM-202ENST00000459997 TLR2O60603 784 aa25.53■■□□□ 1.68
SRM-202ENST00000459997 HMMRO75330 724 aa25.53■■□□□ 1.68
SRM-202ENST00000459997 PTPRAP18433 802 aa25.53■■□□□ 1.68
SRM-202ENST00000459997 ANKRD23Q86SG2 305 aa25.53■■□□□ 1.68
SRM-202ENST00000459997 ADGRA1Q86SQ6 560 aa25.53■■□□□ 1.68
SRM-202ENST00000459997 RHPN1Q8TCX5 695 aa25.53■■□□□ 1.68
SRM-202ENST00000459997 CHMP4BQ9H444 224 aaKnown RBP25.53■■□□□ 1.68
SRM-202ENST00000459997 ZHX2Q9Y6X8 837 aa25.53■■□□□ 1.68
SRM-202ENST00000459997 APBB1O00213 710 aa25.52■■□□□ 1.68
SRM-202ENST00000459997 CTNND1O60716 968 aaKnown RBP25.52■■□□□ 1.68
SRM-202ENST00000459997 PLCG2P16885 1265 aa25.52■■□□□ 1.68
SRM-202ENST00000459997 CAP1Q01518 475 aa25.52■■□□□ 1.68
SRM-202ENST00000459997 SIRT2Q8IXJ6 389 aa25.52■■□□□ 1.68
SRM-202ENST00000459997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.52■■□□□ 1.68
SRM-202ENST00000459997 FAM196BA6NMK8 535 aa25.51■■□□□ 1.67
SRM-202ENST00000459997 PDHXO00330 501 aa25.51■■□□□ 1.67
SRM-202ENST00000459997 CXCL11O14625 94 aa25.51■■□□□ 1.67
SRM-202ENST00000459997 TBC1D12O60347 775 aa25.51■■□□□ 1.67
SRM-202ENST00000459997 IGSF3O75054 1194 aa25.51■■□□□ 1.67
SRM-202ENST00000459997 MOGSQ13724 837 aa25.51■■□□□ 1.67
SRM-202ENST00000459997 PTPN22Q9Y2R2 807 aa25.51■■□□□ 1.67
SRM-202ENST00000459997 NDUFB9Q9Y6M9 179 aa25.51■■□□□ 1.67
SRM-202ENST00000459997 IDH1O75874 414 aaKnown RBP25.5■■□□□ 1.67
SRM-202ENST00000459997 PPP4CP60510 307 aa25.5■■□□□ 1.67
SRM-202ENST00000459997 C20orf194Q5TEA3 1177 aa25.5■■□□□ 1.67
SRM-202ENST00000459997 CDK5RAP2Q96SN8 1893 aa25.5■■□□□ 1.67
SRM-202ENST00000459997 FOCADQ5VW36 1801 aa25.49■■□□□ 1.67
SRM-202ENST00000459997 HTTP42858 3142 aa25.49■■□□□ 1.67
SRM-202ENST00000459997 CYP7A1P22680 504 aa25.49■■□□□ 1.67
SRM-202ENST00000459997 ARHGEF6Q15052 776 aa25.49■■□□□ 1.67
SRM-202ENST00000459997 TGFBRAP1Q8WUH2 860 aa25.49■■□□□ 1.67
SRM-202ENST00000459997 KIF1BPQ96EK5 621 aa25.49■■□□□ 1.67
SRM-202ENST00000459997 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.49■■□□□ 1.67
SRM-202ENST00000459997 AFG3L2Q9Y4W6 797 aa25.49■■□□□ 1.67
SRM-202ENST00000459997 PHIPQ8WWQ0 1821 aa25.49■■□□□ 1.67
SRM-202ENST00000459997 PDE3AQ14432 1141 aa25.48■■□□□ 1.67
SRM-202ENST00000459997 CLASRPQ8N2M8 674 aaKnown RBP25.48■■□□□ 1.67
SRM-202ENST00000459997 FLT1P17948 1338 aa25.47■■□□□ 1.67
SRM-202ENST00000459997 A0A0G2JLL6 359 aaPredicted RBP25.47■■□□□ 1.67
SRM-202ENST00000459997 KIF22Q14807 665 aa25.47■■□□□ 1.67
SRM-202ENST00000459997 PRRT2Q7Z6L0 340 aaPredicted RBP25.47■■□□□ 1.67
SRM-202ENST00000459997 MAPKAPK5Q8IW41 473 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms