RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 SLF2Q8IX21 1173 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 AGBL3Q8NEM8 1001 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 NEK1Q96PY6 1258 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 NAPBQ9H115 298 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
NEDD9-205ENST00000459670 MYH4Q9Y623 1939 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 MYH15Q9Y2K3 1946 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 RAD17O75943 681 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 LARGE1O95461 756 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 PLCG2P16885 1265 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 PSMA5P28066 241 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 ZNF280AP59817 542 aaPredicted RBP12.41□□□□□ -0.42
NEDD9-205ENST00000459670 GABPAQ06546 454 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 C12orf60Q5U649 245 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 CDC42EP5Q6NZY7 148 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 KIAA0825Q8IV33 1275 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 TEKT1Q969V4 418 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 IDI2Q9BXS1 227 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 PLIN4Q96Q06 1357 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 MYH6P13533 1939 aa12.41□□□□□ -0.42
NEDD9-205ENST00000459670 POLR2AP24928 1970 aaKnown RBP12.4□□□□□ -0.42
NEDD9-205ENST00000459670 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 ORC4O43929 436 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 BAG3O95817 575 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 SPDYE6P0CI01 402 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 CYP2D6P10635 497 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 SCNN1DP51172 638 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 AKNAD1Q5T1N1 836 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 CIAPIN1Q6FI81 312 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 BLOC1S2Q6QNY1 142 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 NACAP1Q9BZK3 213 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 CYP46A1Q9Y6A2 500 aa12.4□□□□□ -0.42
NEDD9-205ENST00000459670 OTOFQ9HC10 1997 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 USP17L12C9JPN9 530 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 USP17L21D6R901 530 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 F8W031 263 aaPredicted RBP12.39□□□□□ -0.43
NEDD9-205ENST00000459670 ZNF213O14771 459 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 ST18O60284 1047 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 PCP11498 1178 aaKnown RBP12.39□□□□□ -0.43
NEDD9-205ENST00000459670 LMNB1P20700 586 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 RPS12P25398 132 aaKnown RBP12.39□□□□□ -0.43
NEDD9-205ENST00000459670 TDO2P48775 406 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 MCM2P49736 904 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 MMP14P50281 582 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 CTDSPL2Q05D32 466 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 NFIAQ12857 509 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 DHX32Q7L7V1 743 aaKnown RBP12.39□□□□□ -0.43
NEDD9-205ENST00000459670 TEX11Q8IYF3 940 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 TMX3Q96JJ7 454 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 MTA3Q9BTC8 594 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 PGAP2Q9UHJ9 254 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
NEDD9-205ENST00000459670 CNTNAP1P78357 1384 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 PHIPQ8WWQ0 1821 aa12.39□□□□□ -0.43
NEDD9-205ENST00000459670 SHTN1A0MZ66 631 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 G3V3G9 751 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 HMGB1P09429 215 aaKnown RBP12.38□□□□□ -0.43
NEDD9-205ENST00000459670 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 BECN1Q14457 450 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 CFAP100Q494V2 611 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 SH3BP5LQ7L8J4 393 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 METTL16Q86W50 562 aaKnown RBP12.38□□□□□ -0.43
NEDD9-205ENST00000459670 HSCBQ8IWL3 235 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 DPF2Q92785 391 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 TCEANC2Q96MN5 208 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 OSBPL5Q9H0X9 879 aaPredicted RBP12.38□□□□□ -0.43
NEDD9-205ENST00000459670 INCENPQ9NQS7 918 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 PDRG1Q9NUG6 133 aa12.38□□□□□ -0.43
NEDD9-205ENST00000459670 SH2B2O14492 632 aaPredicted RBP12.37□□□□□ -0.43
NEDD9-205ENST00000459670 NOVP48745 357 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 NT5C2P49902 561 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 PLCD1P51178 756 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 SEC23AQ15436 765 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 FKBP1CQ5VVH2 108 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 C16orf86Q6ZW13 317 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 SGMS1Q86VZ5 419 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 NCOA7Q8NI08 942 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
NEDD9-205ENST00000459670 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 TPCN1Q9ULQ1 816 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 DOCK1Q14185 1865 aa12.37□□□□□ -0.43
NEDD9-205ENST00000459670 B4E1Z4 1266 aa12.36□□□□□ -0.43
NEDD9-205ENST00000459670 EGFRP00533 1210 aa12.36□□□□□ -0.43
NEDD9-205ENST00000459670 APPP05067 770 aa12.36□□□□□ -0.43
NEDD9-205ENST00000459670 ME3Q16798 604 aa12.36□□□□□ -0.43
NEDD9-205ENST00000459670 ZFPM1Q8IX07 1006 aa12.36□□□□□ -0.43
NEDD9-205ENST00000459670 IGDCC4Q8TDY8 1250 aa12.36□□□□□ -0.43
NEDD9-205ENST00000459670 EHD4Q9H223 541 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms