RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 WDHD1O75717 1129 aaPredicted RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 POLR3DP05423 398 aaPredicted RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 IFIT1P09914 478 aaKnown RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 LMOD1P29536 600 aaPredicted RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 TIMM10P62072 90 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 MYL5Q02045 173 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 LRRFIP1Q32MZ4 808 aaKnown RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 TTLL5Q6EMB2 1281 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 OTUD7BQ6GQQ9 843 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 SYNE3Q6ZMZ3 975 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 VSTM4Q8IW00 320 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 ELOA2Q8IYF1 753 aaPredicted RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 OSBP2Q969R2 916 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 NEUROD6Q96NK8 337 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 FMNL2Q96PY5 1086 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 ST7Q9NRC1 585 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 CALCOCO1Q9P1Z2 691 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 DNAI1Q9UI46 699 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 DOCK2Q92608 1830 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 KLF18A0A0U1RQI7 1052 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 EYA2O00167 538 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 BIN1O00499 593 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 FANCGO15287 622 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 PRC1O43663 620 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 PPFIA3O75145 1194 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 ZFYP08048 801 aaPredicted RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 ATP1A3P13637 1013 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 ANTXR2P58335 489 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 IMMTQ16891 758 aaKnown RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 CCDC158Q5M9N0 1113 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 HOMER1Q86YM7 354 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 TMEM139Q8IV31 216 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 IFNL2Q8IZJ0 200 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 RAPGEF4Q8WZA2 1011 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 UBXN4Q92575 508 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
VPS50-208ENST00000458707 PARP3Q9Y6F1 533 aa9.79□□□□□ -0.84
VPS50-208ENST00000458707 MAP3K15Q6ZN16 1313 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 A0A1B0GUL7 405 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 GOLGA8BA8MQT2 603 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 PATL2C9JE40 543 aaKnown RBP9.78□□□□□ -0.84
VPS50-208ENST00000458707 NPHP1O15259 732 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 ARHGAP6O43182 974 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 ZSCAN12O43309 604 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 SYKP43405 635 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 UBASH3AP57075 661 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 SETQ01105 290 aaPredicted RBP9.78□□□□□ -0.84
VPS50-208ENST00000458707 PTPAQ15257 358 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 TMCO3Q6UWJ1 677 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 TTC5Q8N0Z6 440 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 NCOA7Q8NI08 942 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 DPF2Q92785 391 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 DCAF5Q96JK2 942 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 MPHOSPH8Q99549 860 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.78□□□□□ -0.84
VPS50-208ENST00000458707 ARAP2Q8WZ64 1704 aa9.78□□□□□ -0.84
VPS50-208ENST00000458707 VWA3AA6NCI4 1184 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 GOLGA6L9A6NEM1 432 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 FGAP02671 866 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 TATP17735 454 aaPredicted RBP9.77□□□□□ -0.85
VPS50-208ENST00000458707 TBX2Q13207 712 aaPredicted RBP9.77□□□□□ -0.85
VPS50-208ENST00000458707 RESP18Q5W5W9 173 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 TMED8Q6PL24 325 aaPredicted RBP9.77□□□□□ -0.85
VPS50-208ENST00000458707 FAM43BQ6ZT52 329 aaPredicted RBP9.77□□□□□ -0.85
VPS50-208ENST00000458707 JMYQ8N9B5 988 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 SYTL4Q96C24 671 aaPredicted RBP9.77□□□□□ -0.85
VPS50-208ENST00000458707 EFCC1Q9HA90 598 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.77□□□□□ -0.85
VPS50-208ENST00000458707 LRP6O75581 1613 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 ANKRD36CQ5JPF3 1778 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 ATRNO75882 1429 aa9.77□□□□□ -0.85
VPS50-208ENST00000458707 TULP2O00295 520 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 CPLX1O14810 134 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 PIP4K2AP48426 406 aaPredicted RBP9.76□□□□□ -0.85
VPS50-208ENST00000458707 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 LRRC24Q50LG9 513 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 SHC4Q6S5L8 630 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 MNS1Q8NEH6 495 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 MAP3K14Q99558 947 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 C19orf44Q9H6X5 657 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 GJB4Q9NTQ9 266 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 CWC25Q9NXE8 425 aaPredicted RBP9.76□□□□□ -0.85
VPS50-208ENST00000458707 ZMYM6O95789 1325 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 TIAM2Q8IVF5 1701 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 SERPINC1P01008 464 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 TOP1P11387 765 aaKnown RBP9.76□□□□□ -0.85
VPS50-208ENST00000458707 CFAP100Q494V2 611 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 RSRC2Q7L4I2 434 aaKnown RBP9.76□□□□□ -0.85
VPS50-208ENST00000458707 METTL16Q86W50 562 aaKnown RBP9.76□□□□□ -0.85
VPS50-208ENST00000458707 EGFL6Q8IUX8 553 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 GPR161Q8N6U8 529 aaKnown RBP9.76□□□□□ -0.85
VPS50-208ENST00000458707 APPBP2Q92624 585 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 HS3ST6Q96QI5 342 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 ORAI2Q96SN7 254 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 UTP14AQ9BVJ6 771 aaKnown RBP9.76□□□□□ -0.85
VPS50-208ENST00000458707 PPP2R2CQ9Y2T4 447 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 SHANK3Q9BYB0 1731 aa9.76□□□□□ -0.85
VPS50-208ENST00000458707 NBPF26B4DH59 902 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 STX10O60499 249 aa9.75□□□□□ -0.85
VPS50-208ENST00000458707 CUTAO60888 179 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms