RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 UBR2Q8IWV8 1755 aa16.32■□□□□ 0.2
SCFD1-203ENST00000458591 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
SCFD1-203ENST00000458591 MBD4O95243 580 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 PRR29P0C7W0 189 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 CFAP100Q494V2 611 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 RESP18Q5W5W9 173 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
SCFD1-203ENST00000458591 TOMM22Q9NS69 142 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 ZNF446Q9NWS9 450 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 TOB1P50616 345 aaPredicted RBP16.31■□□□□ 0.2
SCFD1-203ENST00000458591 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 CCDC150Q8NCX0 1101 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 ERO1AQ96HE7 468 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 UTP14AQ9BVJ6 771 aaKnown RBP16.31■□□□□ 0.2
SCFD1-203ENST00000458591 INTS13Q9NVM9 706 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 FBXO3Q9UK99 471 aa16.31■□□□□ 0.2
SCFD1-203ENST00000458591 MYO5AQ9Y4I1 1855 aaKnown RBP16.31■□□□□ 0.2
SCFD1-203ENST00000458591 NR5A1Q13285 461 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 HOMER1Q86YM7 354 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 TRMT44Q8IYL2 757 aaKnown RBP16.3■□□□□ 0.2
SCFD1-203ENST00000458591 CNNM3Q8NE01 707 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 SEC31BQ9NQW1 1179 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 DNAI1Q9UI46 699 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 KCNH3Q9ULD8 1083 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 PPP6R2O75170 966 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 UBE3CQ15386 1083 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 USP49Q70CQ1 688 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 PDILTQ8N807 584 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 ZNF397Q8NF99 534 aaPredicted RBP16.3■□□□□ 0.2
SCFD1-203ENST00000458591 EPC1Q9H2F5 836 aa16.3■□□□□ 0.2
SCFD1-203ENST00000458591 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
SCFD1-203ENST00000458591 TPM4P67936 248 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 MYL5Q02045 173 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 RASGRF1Q13972 1273 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 KRBA2Q6ZNG9 492 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 MIGA1Q8NAN2 632 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 OXER1Q8TDS5 423 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 KCND1Q9NSA2 647 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 SLC12A7Q9Y666 1083 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 WDR19Q8NEZ3 1342 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 hCG_1642624A0A1W2PR95 340 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 IKBKBO14920 756 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 FMR1Q06787 632 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCFD1-203ENST00000458591 NAPBQ9H115 298 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 MORC2Q9Y6X9 1032 aaPredicted RBP16.29■□□□□ 0.2
SCFD1-203ENST00000458591 AKAP11Q9UKA4 1901 aa16.29■□□□□ 0.2
SCFD1-203ENST00000458591 PARP4Q9UKK3 1724 aaKnown RBP16.28■□□□□ 0.2
SCFD1-203ENST00000458591 WTIPA6NIX2 430 aaPredicted RBP16.28■□□□□ 0.2
SCFD1-203ENST00000458591 STARD3NLO95772 234 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
SCFD1-203ENST00000458591 LCORLQ8N3X6 602 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 TIGD1Q96MW7 591 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 SERTAD1Q9UHV2 236 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 FAM205CA6NFA0 338 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 GSG1L2A8MUP6 293 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 PATL2C9JE40 543 aaKnown RBP16.28■□□□□ 0.2
SCFD1-203ENST00000458591 TRIM29Q14134 588 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 TTF1Q15361 905 aaPredicted RBP16.28■□□□□ 0.2
SCFD1-203ENST00000458591 CCDC93Q567U6 631 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 TRIM65Q6PJ69 517 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 DIS3L2Q8IYB7 885 aaKnown RBP16.28■□□□□ 0.2
SCFD1-203ENST00000458591 SPATA5Q8NB90 893 aa16.28■□□□□ 0.2
SCFD1-203ENST00000458591 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.2
SCFD1-203ENST00000458591 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
SCFD1-203ENST00000458591 CDKL5O76039 1030 aa16.27■□□□□ 0.2
SCFD1-203ENST00000458591 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.2
SCFD1-203ENST00000458591 ARID4AP29374 1257 aaPredicted RBP16.27■□□□□ 0.2
SCFD1-203ENST00000458591 CASP1P29466 404 aa16.27■□□□□ 0.2
SCFD1-203ENST00000458591 BCAMP50895 628 aa16.27■□□□□ 0.2
SCFD1-203ENST00000458591 MDM2Q00987 491 aaPredicted RBP16.27■□□□□ 0.2
SCFD1-203ENST00000458591 TMEM87BQ96K49 555 aa16.27■□□□□ 0.2
SCFD1-203ENST00000458591 MED15Q96RN5 788 aa16.27■□□□□ 0.2
SCFD1-203ENST00000458591 L2HGDHQ9H9P8 463 aa16.27■□□□□ 0.2
SCFD1-203ENST00000458591 POLR2DO15514 142 aaKnown RBP16.27■□□□□ 0.19
SCFD1-203ENST00000458591 ADKP55263 362 aaKnown RBP16.27■□□□□ 0.19
SCFD1-203ENST00000458591 CPLX2Q6PUV4 134 aaKnown RBP16.27■□□□□ 0.19
SCFD1-203ENST00000458591 NOSTRINQ8IVI9 506 aa16.27■□□□□ 0.19
SCFD1-203ENST00000458591 VSTM4Q8IW00 320 aa16.27■□□□□ 0.19
SCFD1-203ENST00000458591 REXO1L1PQ8IX06 675 aa16.27■□□□□ 0.19
SCFD1-203ENST00000458591 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.19
SCFD1-203ENST00000458591 SHISA4Q96DD7 197 aa16.27■□□□□ 0.19
SCFD1-203ENST00000458591 MAN1B1Q9UKM7 699 aa16.27■□□□□ 0.19
SCFD1-203ENST00000458591 CUTAO60888 179 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 GABPB1Q06547 395 aaPredicted RBP16.26■□□□□ 0.19
SCFD1-203ENST00000458591 SGMS1Q86VZ5 419 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.193e-6■□□□□ 10.3
SCFD1-203ENST00000458591 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 A0A0G2JS52 829 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 KIF2AO00139 706 aaPredicted RBP16.26■□□□□ 0.19
SCFD1-203ENST00000458591 PDE8AO60658 829 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
SCFD1-203ENST00000458591 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
SCFD1-203ENST00000458591 FGFR2P21802 821 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 OLFM4Q6UX06 510 aa16.26■□□□□ 0.19
SCFD1-203ENST00000458591 TMEM139Q8IV31 216 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms