RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 RAP1GAPP47736 663 aa6.63□□□□□ -1.35
UBDP1-202ENST00000457888 URB2Q14146 1524 aaKnown RBP6.63□□□□□ -1.35
UBDP1-202ENST00000457888 SLC23A3Q6PIS1 610 aa6.63□□□□□ -1.35
UBDP1-202ENST00000457888 ZSWIM9Q86XI8 627 aa6.63□□□□□ -1.35
UBDP1-202ENST00000457888 ATXN3LQ9H3M9 355 aa6.63□□□□□ -1.35
UBDP1-202ENST00000457888 ZNF576Q9H609 170 aa6.63□□□□□ -1.35
UBDP1-202ENST00000457888 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
UBDP1-202ENST00000457888 LIG1P18858 919 aa6.62□□□□□ -1.35
UBDP1-202ENST00000457888 MLANAQ16655 118 aa6.62□□□□□ -1.35
UBDP1-202ENST00000457888 CCDC97Q96F63 343 aaPredicted RBP6.62□□□□□ -1.35
UBDP1-202ENST00000457888 FANCD2OSQ96PS1 177 aa6.62□□□□□ -1.35
UBDP1-202ENST00000457888 THOC2Q8NI27 1593 aaKnown RBP6.61□□□□□ -1.35
UBDP1-202ENST00000457888 ZNF503-AS2A6NEH8 195 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 LEFTY1O75610 366 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 SLFN14P0C7P3 912 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 ITPKAP23677 461 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 CFPP27918 469 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 OXCT1P55809 520 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 ID3Q02535 119 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 KCNMB1Q16558 191 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 SMYD4Q8IYR2 804 aaPredicted RBP6.61□□□□□ -1.35
UBDP1-202ENST00000457888 PLAGL2Q9UPG8 496 aa6.61□□□□□ -1.35
UBDP1-202ENST00000457888 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 KIAA0319Q5VV43 1072 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 LILRA6Q6PI73 481 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 ZSCAN18Q8TBC5 510 aaPredicted RBP6.6□□□□□ -1.35
UBDP1-202ENST00000457888 WDR89Q96FK6 387 aaPredicted RBP6.6□□□□□ -1.35
UBDP1-202ENST00000457888 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 CCDC86Q9H6F5 360 aaKnown RBP6.6□□□□□ -1.35
UBDP1-202ENST00000457888 DISC1Q9NRI5 854 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 CCDC87Q9NVE4 849 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 PODXL2Q9NZ53 605 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 CUX1P39880 1505 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 CEP164Q9UPV0 1460 aa6.6□□□□□ -1.35
UBDP1-202ENST00000457888 TSPAN15O95858 294 aa6.59□□□□□ -1.35
UBDP1-202ENST00000457888 C1QL4Q86Z23 238 aa6.59□□□□□ -1.35
UBDP1-202ENST00000457888 PPP1R16BQ96T49 567 aa6.59□□□□□ -1.35
UBDP1-202ENST00000457888 EHD4Q9H223 541 aa6.59□□□□□ -1.35
UBDP1-202ENST00000457888 PRDM7Q9NQW5 492 aa6.59□□□□□ -1.35
UBDP1-202ENST00000457888 MRC2Q9UBG0 1479 aa6.59□□□□□ -1.36
UBDP1-202ENST00000457888 PRDM2Q13029 1718 aa6.59□□□□□ -1.36
UBDP1-202ENST00000457888 ABCC8Q09428 1581 aa6.58□□□□□ -1.36
UBDP1-202ENST00000457888 RNGTTO60942 597 aaKnown RBP6.58□□□□□ -1.36
UBDP1-202ENST00000457888 SSFA2P28290 1259 aa6.58□□□□□ -1.36
UBDP1-202ENST00000457888 PTPN12Q05209 780 aaKnown RBP6.58□□□□□ -1.36
UBDP1-202ENST00000457888 SF3B2Q13435 895 aaKnown RBP6.58□□□□□ -1.36
UBDP1-202ENST00000457888 TTLL4Q14679 1199 aa6.58□□□□□ -1.36
UBDP1-202ENST00000457888 LCNL1Q6ZST4 164 aa6.58□□□□□ -1.36
UBDP1-202ENST00000457888 LRRC56Q8IYG6 542 aaPredicted RBP6.58□□□□□ -1.36
UBDP1-202ENST00000457888 TNKS2Q9H2K2 1166 aa6.58□□□□□ -1.36
UBDP1-202ENST00000457888 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
UBDP1-202ENST00000457888 SNX11Q9Y5W9 270 aa6.58□□□□□ -1.36
UBDP1-202ENST00000457888 TOPBP1Q92547 1522 aa6.58□□□□□ -1.36
UBDP1-202ENST00000457888 WDR62O43379 1518 aa6.57□□□□□ -1.36
UBDP1-202ENST00000457888 ZNF862O60290 1169 aa6.57□□□□□ -1.36
UBDP1-202ENST00000457888 ITIH2P19823 946 aa6.57□□□□□ -1.36
UBDP1-202ENST00000457888 KIF4BQ2VIQ3 1234 aa6.57□□□□□ -1.36
UBDP1-202ENST00000457888 USPL1Q5W0Q7 1092 aa6.57□□□□□ -1.36
UBDP1-202ENST00000457888 SIAH1Q8IUQ4 282 aa6.57□□□□□ -1.36
UBDP1-202ENST00000457888 LIN37Q96GY3 246 aaPredicted RBP6.57□□□□□ -1.36
UBDP1-202ENST00000457888 ZC3H12CQ9C0D7 883 aaKnown RBP6.57□□□□□ -1.36
UBDP1-202ENST00000457888 PCDHGC5Q9Y5F6 944 aa6.57□□□□□ -1.36
UBDP1-202ENST00000457888 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.56□□□□□ -1.36
UBDP1-202ENST00000457888 PRRG2O14669 202 aa6.56□□□□□ -1.36
UBDP1-202ENST00000457888 HCLS1P14317 486 aaPredicted RBP6.56□□□□□ -1.36
UBDP1-202ENST00000457888 HNRNPUQ00839 825 aaKnown RBP eCLIP6.56□□□□□ -1.36
UBDP1-202ENST00000457888 FKBP4Q02790 459 aaKnown RBP eCLIP6.56□□□□□ -1.36
UBDP1-202ENST00000457888 ZP2Q05996 745 aa6.56□□□□□ -1.36
UBDP1-202ENST00000457888 IKZF1Q13422 519 aa6.56□□□□□ -1.36
UBDP1-202ENST00000457888 RPS26P11Q5JNZ5 115 aaPredicted RBP6.56□□□□□ -1.36
UBDP1-202ENST00000457888 ANKLE2Q86XL3 938 aa6.56□□□□□ -1.36
UBDP1-202ENST00000457888 TOP6BLQ8N6T0 577 aa6.56□□□□□ -1.36
UBDP1-202ENST00000457888 ASB11Q8WXH4 323 aa6.56□□□□□ -1.36
UBDP1-202ENST00000457888 KRT82Q9NSB4 513 aa6.56□□□□□ -1.36
UBDP1-202ENST00000457888 CTNND2Q9UQB3 1225 aa6.56□□□□□ -1.36
UBDP1-202ENST00000457888 NCANO14594 1321 aa6.55□□□□□ -1.36
UBDP1-202ENST00000457888 RAD54L2Q9Y4B4 1467 aa6.55□□□□□ -1.36
UBDP1-202ENST00000457888 SYDE1Q6ZW31 735 aaPredicted RBP6.55□□□□□ -1.36
UBDP1-202ENST00000457888 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
UBDP1-202ENST00000457888 SYNJ1O43426 1573 aa6.55□□□□□ -1.36
UBDP1-202ENST00000457888 WRNQ14191 1432 aaPredicted RBP eCLIP6.54□□□□□ -1.36
UBDP1-202ENST00000457888 NEFLP07196 543 aa6.54□□□□□ -1.36
UBDP1-202ENST00000457888 ZSCAN22P10073 491 aaPredicted RBP6.54□□□□□ -1.36
UBDP1-202ENST00000457888 AFMP43652 599 aa6.54□□□□□ -1.36
UBDP1-202ENST00000457888 HEXIM2Q96MH2 286 aaKnown RBP6.54□□□□□ -1.36
UBDP1-202ENST00000457888 ABCB6Q9NP58 842 aa6.54□□□□□ -1.36
UBDP1-202ENST00000457888 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
UBDP1-202ENST00000457888 POLA1P09884 1462 aaPredicted RBP6.53□□□□□ -1.36
UBDP1-202ENST00000457888 DNMBPQ6XZF7 1577 aa6.53□□□□□ -1.36
UBDP1-202ENST00000457888 B8ZZF3 427 aa6.53□□□□□ -1.36
UBDP1-202ENST00000457888 NEFMP07197 916 aa6.53□□□□□ -1.36
UBDP1-202ENST00000457888 GSTP1P09211 210 aaKnown RBP6.53□□□□□ -1.36
UBDP1-202ENST00000457888 ZNF157P51786 506 aaPredicted RBP6.53□□□□□ -1.36
UBDP1-202ENST00000457888 FYB2Q5VWT5 728 aa6.53□□□□□ -1.36
UBDP1-202ENST00000457888 NPHS2Q9NP85 383 aa6.53□□□□□ -1.36
UBDP1-202ENST00000457888 LMCD1Q9NZU5 365 aa6.53□□□□□ -1.36
UBDP1-202ENST00000457888 ZNF608Q9ULD9 1512 aaPredicted RBP6.53□□□□□ -1.36
UBDP1-202ENST00000457888 SOGA1O94964 1423 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 ABL1P00519 1130 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 GLI1P08151 1106 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms