RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 TMEM39BQ9GZU3 492 aa24.7■■□□□ 1.54
FAM3A-217ENST00000457212 OSBPL5Q9H0X9 879 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-217ENST00000457212 FLT1P17948 1338 aa24.69■■□□□ 1.54
FAM3A-217ENST00000457212 NF2P35240 595 aa24.69■■□□□ 1.54
FAM3A-217ENST00000457212 HOOK2Q96ED9 719 aa24.69■■□□□ 1.54
FAM3A-217ENST00000457212 FAM227BQ96M60 508 aa24.69■■□□□ 1.54
FAM3A-217ENST00000457212 TEPSINQ96N21 525 aa24.69■■□□□ 1.54
FAM3A-217ENST00000457212 SEC62Q99442 399 aaKnown RBP24.69■■□□□ 1.54
FAM3A-217ENST00000457212 ATP8A2Q9NTI2 1148 aa24.69■■□□□ 1.54
FAM3A-217ENST00000457212 TRPM7Q96QT4 1865 aa24.68■■□□□ 1.54
FAM3A-217ENST00000457212 A0A0D9SFI3 127 aa24.68■■□□□ 1.54
FAM3A-217ENST00000457212 MAPKAPK5Q8IW41 473 aa24.68■■□□□ 1.54
FAM3A-217ENST00000457212 ATRNL1Q5VV63 1379 aa24.67■■□□□ 1.54
FAM3A-217ENST00000457212 MFAP1P55081 439 aaKnown RBP24.67■■□□□ 1.54
FAM3A-217ENST00000457212 PRAMEF18Q5VWM3 479 aa24.67■■□□□ 1.54
FAM3A-217ENST00000457212 DLK2Q6UY11 383 aa24.67■■□□□ 1.54
FAM3A-217ENST00000457212 ZFPM1Q8IX07 1006 aa24.67■■□□□ 1.54
FAM3A-217ENST00000457212 DDRGK1Q96HY6 314 aa24.67■■□□□ 1.54
FAM3A-217ENST00000457212 DHX36Q9H2U1 1008 aaKnown RBP24.67■■□□□ 1.54
FAM3A-217ENST00000457212 SLC4A4Q9Y6R1 1079 aa24.67■■□□□ 1.54
FAM3A-217ENST00000457212 CHMLP26374 656 aa24.66■■□□□ 1.54
FAM3A-217ENST00000457212 NBPF12Q5TAG4 269 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-217ENST00000457212 CWC27Q6UX04 472 aaKnown RBP24.66■■□□□ 1.54
FAM3A-217ENST00000457212 ZSCAN29Q8IWY8 852 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-217ENST00000457212 RUFY2Q8WXA3 655 aa24.66■■□□□ 1.54
FAM3A-217ENST00000457212 MKRN1Q9UHC7 482 aaKnown RBP24.66■■□□□ 1.54
FAM3A-217ENST00000457212 PRKAB2O43741 272 aa24.65■■□□□ 1.54
FAM3A-217ENST00000457212 CELF2O95319 508 aaKnown RBP24.65■■□□□ 1.54
FAM3A-217ENST00000457212 C1QTNF8P60827 252 aa24.65■■□□□ 1.54
FAM3A-217ENST00000457212 FMR1Q06787 632 aaKnown RBP eCLIP24.65■■□□□ 1.54
FAM3A-217ENST00000457212 GIMAP6Q6P9H5 292 aa24.65■■□□□ 1.54
FAM3A-217ENST00000457212 SDR42E1Q8WUS8 393 aa24.65■■□□□ 1.54
FAM3A-217ENST00000457212 DCP1AQ9NPI6 582 aaPredicted RBP24.65■■□□□ 1.54
FAM3A-217ENST00000457212 RAD50Q92878 1312 aa24.64■■□□□ 1.54
FAM3A-217ENST00000457212 FKBP1BP68106 108 aa24.64■■□□□ 1.54
FAM3A-217ENST00000457212 SH3BP5LQ7L8J4 393 aa24.64■■□□□ 1.54
FAM3A-217ENST00000457212 CSRNP1Q96S65 589 aa24.64■■□□□ 1.54
FAM3A-217ENST00000457212 ZNF408Q9H9D4 720 aa24.64■■□□□ 1.54
FAM3A-217ENST00000457212 NAV1Q8NEY1 1877 aa24.64■■□□□ 1.53
FAM3A-217ENST00000457212 CCDC171Q6TFL3 1326 aa24.63■■□□□ 1.53
FAM3A-217ENST00000457212 MYH1P12882 1939 aa24.63■■□□□ 1.53
FAM3A-217ENST00000457212 DDTLA6NHG4 134 aaPredicted RBP24.63■■□□□ 1.53
FAM3A-217ENST00000457212 GSG1L2A8MUP6 293 aa24.63■■□□□ 1.53
FAM3A-217ENST00000457212 PATL2C9JE40 543 aaKnown RBP24.63■■□□□ 1.53
FAM3A-217ENST00000457212 CCDC129Q6ZRS4 1044 aa24.63■■□□□ 1.53
FAM3A-217ENST00000457212 CDAN1Q8IWY9 1227 aa24.63■■□□□ 1.53
FAM3A-217ENST00000457212 PPP1R12BO60237 982 aaPredicted RBP24.62■■□□□ 1.53
FAM3A-217ENST00000457212 APLP1P51693 650 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 CST9Q5W186 159 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 DCAF15Q66K64 600 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 TTC6Q86TZ1 520 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 C2orf69Q8N8R5 385 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 NACAP1Q9BZK3 213 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 GBA2Q9HCG7 927 aaPredicted RBP24.62■■□□□ 1.53
FAM3A-217ENST00000457212 MCM9Q9NXL9 1143 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 PI4KBQ9UBF8 816 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 SSC5DA1L4H1 1573 aa24.62■■□□□ 1.53
FAM3A-217ENST00000457212 DDX60LQ5H9U9 1706 aaKnown RBP24.61■■□□□ 1.53
FAM3A-217ENST00000457212 TMEM88BA6NKF7 163 aa24.61■■□□□ 1.53
FAM3A-217ENST00000457212 CDC45O75419 566 aa24.61■■□□□ 1.53
FAM3A-217ENST00000457212 APPP05067 770 aa24.61■■□□□ 1.53
FAM3A-217ENST00000457212 HLA-DOAP06340 250 aa24.61■■□□□ 1.53
FAM3A-217ENST00000457212 CASC1Q6TDU7 716 aa24.61■■□□□ 1.53
FAM3A-217ENST00000457212 AMOTL1Q8IY63 956 aa24.61■■□□□ 1.53
FAM3A-217ENST00000457212 SAP30BPQ9UHR5 308 aaKnown RBP24.61■■□□□ 1.53
FAM3A-217ENST00000457212 PALD1Q9ULE6 856 aa24.61■■□□□ 1.53
FAM3A-217ENST00000457212 PAPPA2Q9BXP8 1791 aa24.6■■□□□ 1.53
FAM3A-217ENST00000457212 ZNF589Q86UQ0 364 aaPredicted RBP24.6■■□□□ 1.53
FAM3A-217ENST00000457212 FOXP4Q8IVH2 680 aaPredicted RBP24.6■■□□□ 1.53
FAM3A-217ENST00000457212 TBC1D12O60347 775 aa24.59■■□□□ 1.53
FAM3A-217ENST00000457212 POLR3DP05423 398 aaPredicted RBP24.59■■□□□ 1.53
FAM3A-217ENST00000457212 MAP3K10Q02779 954 aa24.59■■□□□ 1.53
FAM3A-217ENST00000457212 ARMC9Q7Z3E5 817 aa24.59■■□□□ 1.53
FAM3A-217ENST00000457212 IFNL3Q8IZI9 196 aa24.59■■□□□ 1.53
FAM3A-217ENST00000457212 ARPP21Q9UBL0 812 aaPredicted RBP24.59■■□□□ 1.53
FAM3A-217ENST00000457212 HERC5Q9UII4 1024 aaKnown RBP24.59■■□□□ 1.53
FAM3A-217ENST00000457212 TAOK2Q9UL54 1235 aa24.59■■□□□ 1.53
FAM3A-217ENST00000457212 TDO2P48775 406 aa24.58■■□□□ 1.53
FAM3A-217ENST00000457212 TTLL12Q14166 644 aaPredicted RBP24.58■■□□□ 1.53
FAM3A-217ENST00000457212 MAP3K11Q16584 847 aa24.58■■□□□ 1.53
FAM3A-217ENST00000457212 ZNF341Q9BYN7 854 aa24.58■■□□□ 1.53
FAM3A-217ENST00000457212 EHD4Q9H223 541 aa24.58■■□□□ 1.53
FAM3A-217ENST00000457212 CREBZFQ9NS37 354 aa24.58■■□□□ 1.53
FAM3A-217ENST00000457212 BAZ2AQ9UIF9 1905 aaKnown RBP24.57■■□□□ 1.52
FAM3A-217ENST00000457212 SGSM2O43147 1006 aa24.57■■□□□ 1.52
FAM3A-217ENST00000457212 HSPD1P10809 573 aaKnown RBP24.57■■□□□ 1.52
FAM3A-217ENST00000457212 IREB2P48200 963 aaKnown RBP24.57■■□□□ 1.52
FAM3A-217ENST00000457212 ALX1Q15699 326 aa24.57■■□□□ 1.52
FAM3A-217ENST00000457212 SBK1Q52WX2 424 aa24.57■■□□□ 1.52
FAM3A-217ENST00000457212 METTL16Q86W50 562 aaKnown RBP24.57■■□□□ 1.52
FAM3A-217ENST00000457212 NAPBQ9H115 298 aa24.57■■□□□ 1.52
FAM3A-217ENST00000457212 EPB41L4AQ9HCS5 686 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-217ENST00000457212 UNCXA6NJT0 531 aa24.56■■□□□ 1.52
FAM3A-217ENST00000457212 USP17L12C9JPN9 530 aa24.56■■□□□ 1.52
FAM3A-217ENST00000457212 USP17L21D6R901 530 aa24.56■■□□□ 1.52
FAM3A-217ENST00000457212 USP2O75604 605 aaPredicted RBP24.56■■□□□ 1.52
FAM3A-217ENST00000457212 C12orf60Q5U649 245 aa24.56■■□□□ 1.52
FAM3A-217ENST00000457212 VPS53Q5VIR6 699 aa24.56■■□□□ 1.52
FAM3A-217ENST00000457212 CTR9Q6PD62 1173 aa24.56■■□□□ 1.52
FAM3A-217ENST00000457212 MIGA2Q7L4E1 593 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms