RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
ATG4A-206ENST00000457035 TCRBV5S4A2TA0A5A2 114 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 PDE6AP16499 860 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 NFIAQ12857 509 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 GRM1Q13255 1194 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 RASA3Q14644 834 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 SLC9C2Q5TAH2 1124 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 CDCA5Q96FF9 252 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 IDI2Q9BXS1 227 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 MAST2Q6P0Q8 1798 aa12.19□□□□□ -0.46
ATG4A-206ENST00000457035 WDR33Q9C0J8 1336 aaKnown RBP12.18□□□□□ -0.46
ATG4A-206ENST00000457035 RASSF10A6NK89 507 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
ATG4A-206ENST00000457035 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
ATG4A-206ENST00000457035 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
ATG4A-206ENST00000457035 CHGBP05060 677 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 ADD2P35612 726 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 CTCFP49711 727 aaPredicted RBP12.18□□□□□ -0.46
ATG4A-206ENST00000457035 TNFAIP1Q13829 316 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 SLFNL1Q499Z3 407 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 CENPQQ7L2Z9 268 aaPredicted RBP12.18□□□□□ -0.46
ATG4A-206ENST00000457035 FAM83AQ86UY5 434 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 KBTBD3Q8NAB2 608 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 TEPSINQ96N21 525 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 AATFQ9NY61 560 aaKnown RBP eCLIP12.18□□□□□ -0.466e-7■■■■■ 46.9
ATG4A-206ENST00000457035 FAM198AQ9UFP1 575 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 PPP2R3BQ9Y5P8 575 aa12.18□□□□□ -0.46
ATG4A-206ENST00000457035 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 FOCADQ5VW36 1801 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 BAG3O95817 575 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 LBX1P52954 281 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 DYNLL1P63167 89 aaKnown RBP12.17□□□□□ -0.46
ATG4A-206ENST00000457035 UBE3CQ15386 1083 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 NBPF12Q5TAG4 269 aaPredicted RBP12.17□□□□□ -0.46
ATG4A-206ENST00000457035 ZFPM1Q8IX07 1006 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 SH3RF3Q8TEJ3 882 aaPredicted RBP12.17□□□□□ -0.46
ATG4A-206ENST00000457035 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 CCDC136Q96JN2 1154 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 TMEM39BQ9GZU3 492 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 DDX4Q9NQI0 724 aaKnown RBP12.17□□□□□ -0.46
ATG4A-206ENST00000457035 TMOD2Q9NZR1 351 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
ATG4A-206ENST00000457035 MYH1P12882 1939 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 PLCG2P16885 1265 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 TNNI2P48788 182 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 RGS3P49796 1198 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
ATG4A-206ENST00000457035 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 MIGA1Q8NAN2 632 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 RIOK1Q9BRS2 568 aaKnown RBP12.16□□□□□ -0.46
ATG4A-206ENST00000457035 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.46
ATG4A-206ENST00000457035 ZNF408Q9H9D4 720 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 PRDM10Q9NQV6 1147 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 WBP1LQ9NX94 342 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 PPP4R2Q9NY27 417 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 RFX7Q2KHR2 1363 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 CASP8AP2Q9UKL3 1982 aa12.16□□□□□ -0.46
ATG4A-206ENST00000457035 RNF113AO15541 343 aaKnown RBP12.15□□□□□ -0.46
ATG4A-206ENST00000457035 ENTPD3O75355 529 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 TCP10Q12799 353 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 SUPT20HL1Q3ZLR7 823 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 SH3BP5LQ7L8J4 393 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 SAPCD2Q86UD0 394 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 TEX11Q8IYF3 940 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 EVI5LQ96CN4 794 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
ATG4A-206ENST00000457035 NOL10Q9BSC4 688 aaKnown RBP12.15□□□□□ -0.46
ATG4A-206ENST00000457035 GBA2Q9HCG7 927 aaPredicted RBP12.15□□□□□ -0.46
ATG4A-206ENST00000457035 MAGEB6P1A0A0J9YX57 407 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
ATG4A-206ENST00000457035 HSPA8P11142 646 aaKnown RBP12.14□□□□□ -0.47
ATG4A-206ENST00000457035 PYGBP11216 843 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 FKBP1BP68106 108 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 MOB2Q70IA6 237 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 CERS3Q8IU89 383 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 C2orf69Q8N8R5 385 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 TGFBRAP1Q8WUH2 860 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 OSBP2Q969R2 916 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 PUS7LQ9H0K6 701 aaKnown RBP12.14□□□□□ -0.47
ATG4A-206ENST00000457035 TLL2Q9Y6L7 1015 aa12.14□□□□□ -0.47
ATG4A-206ENST00000457035 BAZ2AQ9UIF9 1905 aaKnown RBP12.13□□□□□ -0.47
ATG4A-206ENST00000457035 DDTLA6NHG4 134 aaPredicted RBP12.13□□□□□ -0.47
ATG4A-206ENST00000457035 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
ATG4A-206ENST00000457035 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
ATG4A-206ENST00000457035 NF2P35240 595 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 ECE1P42892 770 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
ATG4A-206ENST00000457035 PICALMQ13492 652 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 MAP3K11Q16584 847 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 TICAM2Q86XR7 235 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 FSD1Q9BTV5 496 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 FZD1Q9UP38 647 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
ATG4A-206ENST00000457035 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
ATG4A-206ENST00000457035 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
ATG4A-206ENST00000457035 UBE2Q2LH0YL09 131 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms