RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 LRIT3Q3SXY7 679 aa16.54■□□□□ 0.24
SNHG17-208ENST00000456953 RABL6Q3YEC7 729 aaPredicted RBP16.54■□□□□ 0.24
SNHG17-208ENST00000456953 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
SNHG17-208ENST00000456953 C7orf61Q8IZ16 206 aa16.54■□□□□ 0.24
SNHG17-208ENST00000456953 SCYL3Q8IZE3 742 aa16.54■□□□□ 0.24
SNHG17-208ENST00000456953 SMCR8Q8TEV9 937 aaPredicted RBP16.54■□□□□ 0.24
SNHG17-208ENST00000456953 FAM198AQ9UFP1 575 aa16.54■□□□□ 0.24
SNHG17-208ENST00000456953 UTYO14607 1347 aa16.53■□□□□ 0.24
SNHG17-208ENST00000456953 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
SNHG17-208ENST00000456953 IFIT1P09914 478 aaKnown RBP16.53■□□□□ 0.24
SNHG17-208ENST00000456953 PTPRAP18433 802 aa16.53■□□□□ 0.24
SNHG17-208ENST00000456953 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
SNHG17-208ENST00000456953 GADL1Q6ZQY3 521 aa16.53■□□□□ 0.24
SNHG17-208ENST00000456953 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
SNHG17-208ENST00000456953 COA7Q96BR5 231 aa16.53■□□□□ 0.24
SNHG17-208ENST00000456953 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.53■□□□□ 0.242e-6■■□□□ 13.6
SNHG17-208ENST00000456953 BICC1Q9H694 974 aaKnown RBP16.53■□□□□ 0.24
SNHG17-208ENST00000456953 AFG3L2Q9Y4W6 797 aa16.53■□□□□ 0.24
SNHG17-208ENST00000456953 ATRNL1Q5VV63 1379 aa16.52■□□□□ 0.24
SNHG17-208ENST00000456953 NBPF7P0C2Y1 421 aaPredicted RBP16.52■□□□□ 0.24
SNHG17-208ENST00000456953 FGFR2P21802 821 aa16.52■□□□□ 0.24
SNHG17-208ENST00000456953 DIXDC1Q155Q3 683 aa16.52■□□□□ 0.24
SNHG17-208ENST00000456953 Q7L0L9 218 aa16.52■□□□□ 0.24
SNHG17-208ENST00000456953 MTMR10Q9NXD2 777 aa16.52■□□□□ 0.24
SNHG17-208ENST00000456953 TAOK2Q9UL54 1235 aa16.52■□□□□ 0.24
SNHG17-208ENST00000456953 ZMYND8Q9ULU4 1186 aaPredicted RBP16.52■□□□□ 0.24
SNHG17-208ENST00000456953 TDHQ8IZJ6 230 aa16.51■□□□□ 0.23
SNHG17-208ENST00000456953 NBPF3Q9H094 633 aa16.51■□□□□ 0.23
SNHG17-208ENST00000456953 USP40Q9NVE5 1235 aa16.51■□□□□ 0.23
SNHG17-208ENST00000456953 DNAH12Q6ZR08 3092 aa16.51■□□□□ 0.23
SNHG17-208ENST00000456953 MYH13Q9UKX3 1938 aa16.51■□□□□ 0.23
SNHG17-208ENST00000456953 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
SNHG17-208ENST00000456953 EYSQ5T1H1 3165 aa16.5■□□□□ 0.23
SNHG17-208ENST00000456953 HMGCRP04035 888 aa16.5■□□□□ 0.23
SNHG17-208ENST00000456953 MAGEA10P43363 369 aaPredicted RBP16.5■□□□□ 0.23
SNHG17-208ENST00000456953 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
SNHG17-208ENST00000456953 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
SNHG17-208ENST00000456953 ANKRD13CQ8N6S4 541 aa16.5■□□□□ 0.23
SNHG17-208ENST00000456953 ANKRD44Q8N8A2 993 aa16.5■□□□□ 0.23
SNHG17-208ENST00000456953 PTPRFP10586 1907 aa16.5■□□□□ 0.23
SNHG17-208ENST00000456953 SPTBN5Q9NRC6 3674 aaKnown RBP16.49■□□□□ 0.23
SNHG17-208ENST00000456953 SLC5A1P13866 664 aa16.49■□□□□ 0.23
SNHG17-208ENST00000456953 FAM110CQ1W6H9 321 aa16.49■□□□□ 0.23
SNHG17-208ENST00000456953 DOCK3Q8IZD9 2030 aa16.49■□□□□ 0.23
SNHG17-208ENST00000456953 PNMA3Q9UL41 463 aa16.49■□□□□ 0.23
SNHG17-208ENST00000456953 AGTPBP1Q9UPW5 1226 aa16.49■□□□□ 0.23
SNHG17-208ENST00000456953 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
SNHG17-208ENST00000456953 TRIM75PA6NK02 468 aa16.48■□□□□ 0.23
SNHG17-208ENST00000456953 CTNND1O60716 968 aaKnown RBP16.48■□□□□ 0.23
SNHG17-208ENST00000456953 ENTPD3O75355 529 aa16.48■□□□□ 0.23
SNHG17-208ENST00000456953 LDHBP07195 334 aaKnown RBP16.48■□□□□ 0.23
SNHG17-208ENST00000456953 PRDX5P30044 214 aa16.48■□□□□ 0.23
SNHG17-208ENST00000456953 MAP3K10Q02779 954 aa16.48■□□□□ 0.23
SNHG17-208ENST00000456953 KLHDC4Q8TBB5 520 aa16.48■□□□□ 0.23
SNHG17-208ENST00000456953 LPIN2Q92539 896 aa16.48■□□□□ 0.23
SNHG17-208ENST00000456953 COL25A1Q9BXS0 654 aaPredicted RBP16.48■□□□□ 0.23
SNHG17-208ENST00000456953 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
SNHG17-208ENST00000456953 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
SNHG17-208ENST00000456953 SYN1P17600 705 aa16.47■□□□□ 0.23
SNHG17-208ENST00000456953 RGS3P49796 1198 aa16.47■□□□□ 0.23
SNHG17-208ENST00000456953 UBE2OQ9C0C9 1292 aaKnown RBP16.47■□□□□ 0.23
SNHG17-208ENST00000456953 C11orf49Q9H6J7 331 aa16.47■□□□□ 0.23
SNHG17-208ENST00000456953 HMX1Q9NP08 348 aaPredicted RBP16.47■□□□□ 0.23
SNHG17-208ENST00000456953 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
SNHG17-208ENST00000456953 DOCK1Q14185 1865 aa16.47■□□□□ 0.23
SNHG17-208ENST00000456953 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
SNHG17-208ENST00000456953 DDX60LQ5H9U9 1706 aaKnown RBP16.46■□□□□ 0.23
SNHG17-208ENST00000456953 ZSCAN29Q8IWY8 852 aaPredicted RBP16.46■□□□□ 0.23
SNHG17-208ENST00000456953 RFX7Q2KHR2 1363 aa16.46■□□□□ 0.23
SNHG17-208ENST00000456953 SALL1Q9NSC2 1324 aa16.45■□□□□ 0.22
SNHG17-208ENST00000456953 PRUNE2Q8WUY3 3088 aa16.45■□□□□ 0.22
SNHG17-208ENST00000456953 GCLCP48506 637 aaPredicted RBP16.45■□□□□ 0.22
SNHG17-208ENST00000456953 TREML2Q5T2D2 321 aa16.45■□□□□ 0.22
SNHG17-208ENST00000456953 SH3BP5LQ7L8J4 393 aa16.45■□□□□ 0.22
SNHG17-208ENST00000456953 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.45■□□□□ 0.222e-19■□□□□ 8.5
SNHG17-208ENST00000456953 MIER1Q8N108 512 aa16.45■□□□□ 0.22
SNHG17-208ENST00000456953 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
SNHG17-208ENST00000456953 GNL3LQ9NVN8 582 aaKnown RBP16.45■□□□□ 0.22
SNHG17-208ENST00000456953 OGDHLQ9ULD0 1010 aa16.45■□□□□ 0.22
SNHG17-208ENST00000456953 EYA2O00167 538 aa16.44■□□□□ 0.22
SNHG17-208ENST00000456953 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
SNHG17-208ENST00000456953 GJD2Q9UKL4 321 aa16.44■□□□□ 0.22
SNHG17-208ENST00000456953 GAKO14976 1311 aa16.44■□□□□ 0.22
SNHG17-208ENST00000456953 DDTLA6NHG4 134 aaPredicted RBP16.43■□□□□ 0.22
SNHG17-208ENST00000456953 SEMA3EO15041 775 aa16.43■□□□□ 0.22
SNHG17-208ENST00000456953 LOC285556D6RIA3 1793 aa16.42■□□□□ 0.22
SNHG17-208ENST00000456953 TRIM32Q13049 653 aa16.42■□□□□ 0.22
SNHG17-208ENST00000456953 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■■□□□ 13.4
SNHG17-208ENST00000456953 FAM109BQ6ICB4 259 aaPredicted RBP16.42■□□□□ 0.22
SNHG17-208ENST00000456953 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
SNHG17-208ENST00000456953 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.42■□□□□ 0.22
SNHG17-208ENST00000456953 DENND2AQ9ULE3 1009 aa16.42■□□□□ 0.22
SNHG17-208ENST00000456953 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
SNHG17-208ENST00000456953 PFASO15067 1338 aa16.42■□□□□ 0.22
SNHG17-208ENST00000456953 MYH2Q9UKX2 1941 aa16.41■□□□□ 0.22
SNHG17-208ENST00000456953 TBC1D12O60347 775 aa16.41■□□□□ 0.22
SNHG17-208ENST00000456953 MAP3K21Q5TCX8 1036 aa16.41■□□□□ 0.22
SNHG17-208ENST00000456953 ATG9AQ7Z3C6 839 aa16.41■□□□□ 0.22
SNHG17-208ENST00000456953 CCDC84Q86UT8 332 aaPredicted RBP16.41■□□□□ 0.22
SNHG17-208ENST00000456953 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms