RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 RUFY2Q8WXA3 655 aa21.45■■□□□ 1.02
FAM239A-203ENST00000456563 CDCA5Q96FF9 252 aa21.45■■□□□ 1.02
FAM239A-203ENST00000456563 TEPSINQ96N21 525 aa21.45■■□□□ 1.02
FAM239A-203ENST00000456563 TMEM39BQ9GZU3 492 aa21.45■■□□□ 1.02
FAM239A-203ENST00000456563 OSBPL5Q9H0X9 879 aaPredicted RBP21.45■■□□□ 1.02
FAM239A-203ENST00000456563 ATP8A2Q9NTI2 1148 aa21.45■■□□□ 1.02
FAM239A-203ENST00000456563 MKRN1Q9UHC7 482 aaKnown RBP21.45■■□□□ 1.02
FAM239A-203ENST00000456563 SLC4A4Q9Y6R1 1079 aa21.45■■□□□ 1.02
FAM239A-203ENST00000456563 FLT1P17948 1338 aa21.45■■□□□ 1.02
FAM239A-203ENST00000456563 TRAF5O00463 557 aa21.44■■□□□ 1.02
FAM239A-203ENST00000456563 PRKAB2O43741 272 aa21.44■■□□□ 1.02
FAM239A-203ENST00000456563 DLK2Q6UY11 383 aa21.44■■□□□ 1.02
FAM239A-203ENST00000456563 CCDC129Q6ZRS4 1044 aa21.44■■□□□ 1.02
FAM239A-203ENST00000456563 SDR42E1Q8WUS8 393 aa21.44■■□□□ 1.02
FAM239A-203ENST00000456563 PASKQ96RG2 1323 aa21.44■■□□□ 1.02
FAM239A-203ENST00000456563 COL2A1P02458 1487 aaPredicted RBP21.44■■□□□ 1.02
FAM239A-203ENST00000456563 MFAP1P55081 439 aaKnown RBP21.43■■□□□ 1.02
FAM239A-203ENST00000456563 PRAMEF18Q5VWM3 479 aa21.43■■□□□ 1.02
FAM239A-203ENST00000456563 GIMAP6Q6P9H5 292 aa21.43■■□□□ 1.02
FAM239A-203ENST00000456563 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
FAM239A-203ENST00000456563 DCP1AQ9NPI6 582 aaPredicted RBP21.43■■□□□ 1.02
FAM239A-203ENST00000456563 CCDC171Q6TFL3 1326 aa21.43■■□□□ 1.02
FAM239A-203ENST00000456563 RAD50Q92878 1312 aa21.43■■□□□ 1.02
FAM239A-203ENST00000456563 ATRNL1Q5VV63 1379 aa21.43■■□□□ 1.02
FAM239A-203ENST00000456563 GSG1L2A8MUP6 293 aa21.42■■□□□ 1.02
FAM239A-203ENST00000456563 PATL2C9JE40 543 aaKnown RBP21.42■■□□□ 1.02
FAM239A-203ENST00000456563 CDC45O75419 566 aa21.42■■□□□ 1.02
FAM239A-203ENST00000456563 FMR1Q06787 632 aaKnown RBP eCLIP21.42■■□□□ 1.02
FAM239A-203ENST00000456563 SUPT20HL1Q3ZLR7 823 aa21.42■■□□□ 1.02
FAM239A-203ENST00000456563 NBPF12Q5TAG4 269 aaPredicted RBP21.42■■□□□ 1.02
FAM239A-203ENST00000456563 SH3BP5LQ7L8J4 393 aa21.42■■□□□ 1.02
FAM239A-203ENST00000456563 DHX36Q9H2U1 1008 aaKnown RBP21.42■■□□□ 1.02
FAM239A-203ENST00000456563 DDTLA6NHG4 134 aaPredicted RBP21.41■■□□□ 1.02
FAM239A-203ENST00000456563 CDAN1Q8IWY9 1227 aa21.41■■□□□ 1.02
FAM239A-203ENST00000456563 CDK5RAP2Q96SN8 1893 aa21.41■■□□□ 1.02
FAM239A-203ENST00000456563 FOCADQ5VW36 1801 aa21.41■■□□□ 1.02
FAM239A-203ENST00000456563 SGSM2O43147 1006 aa21.4■■□□□ 1.02
FAM239A-203ENST00000456563 NF2P35240 595 aa21.4■■□□□ 1.02
FAM239A-203ENST00000456563 ZSCAN29Q8IWY8 852 aaPredicted RBP21.4■■□□□ 1.02
FAM239A-203ENST00000456563 HOOK2Q96ED9 719 aa21.4■■□□□ 1.02
FAM239A-203ENST00000456563 DDRGK1Q96HY6 314 aa21.4■■□□□ 1.02
FAM239A-203ENST00000456563 IL25Q9H293 177 aa21.4■■□□□ 1.02
FAM239A-203ENST00000456563 FOXP2O15409 715 aa21.39■■□□□ 1.01
FAM239A-203ENST00000456563 CASC1Q6TDU7 716 aa21.39■■□□□ 1.01
FAM239A-203ENST00000456563 IFNL3Q8IZI9 196 aa21.39■■□□□ 1.01
FAM239A-203ENST00000456563 CSRNP1Q96S65 589 aa21.39■■□□□ 1.01
FAM239A-203ENST00000456563 NACAP1Q9BZK3 213 aa21.39■■□□□ 1.01
FAM239A-203ENST00000456563 EPB41L4AQ9HCS5 686 aaPredicted RBP21.39■■□□□ 1.01
FAM239A-203ENST00000456563 MCM9Q9NXL9 1143 aa21.39■■□□□ 1.01
FAM239A-203ENST00000456563 SAP30BPQ9UHR5 308 aaKnown RBP21.39■■□□□ 1.01
FAM239A-203ENST00000456563 PALD1Q9ULE6 856 aa21.39■■□□□ 1.01
FAM239A-203ENST00000456563 CELF2O95319 508 aaKnown RBP21.38■■□□□ 1.01
FAM239A-203ENST00000456563 APPP05067 770 aa21.38■■□□□ 1.01
FAM239A-203ENST00000456563 HSPD1P10809 573 aaKnown RBP21.38■■□□□ 1.01
FAM239A-203ENST00000456563 VPS53Q5VIR6 699 aa21.38■■□□□ 1.01
FAM239A-203ENST00000456563 ESYT1Q9BSJ8 1104 aa21.38■■□□□ 1.01
FAM239A-203ENST00000456563 PI4KBQ9UBF8 816 aa21.38■■□□□ 1.01
FAM239A-203ENST00000456563 SSC5DA1L4H1 1573 aa21.37■■□□□ 1.01
FAM239A-203ENST00000456563 POLR3DP05423 398 aaPredicted RBP21.37■■□□□ 1.01
FAM239A-203ENST00000456563 MAP3K10Q02779 954 aa21.37■■□□□ 1.01
FAM239A-203ENST00000456563 ALX1Q15699 326 aa21.37■■□□□ 1.01
FAM239A-203ENST00000456563 SBK1Q52WX2 424 aa21.37■■□□□ 1.01
FAM239A-203ENST00000456563 CST9Q5W186 159 aa21.37■■□□□ 1.01
FAM239A-203ENST00000456563 TTC6Q86TZ1 520 aa21.37■■□□□ 1.01
FAM239A-203ENST00000456563 ZNF408Q9H9D4 720 aa21.37■■□□□ 1.01
FAM239A-203ENST00000456563 USP17L12C9JPN9 530 aa21.36■■□□□ 1.01
FAM239A-203ENST00000456563 USP17L21D6R901 530 aa21.36■■□□□ 1.01
FAM239A-203ENST00000456563 HLA-DOAP06340 250 aa21.36■■□□□ 1.01
FAM239A-203ENST00000456563 DCAF15Q66K64 600 aa21.36■■□□□ 1.01
FAM239A-203ENST00000456563 CTR9Q6PD62 1173 aa21.36■■□□□ 1.01
FAM239A-203ENST00000456563 METTL16Q86W50 562 aaKnown RBP21.36■■□□□ 1.01
FAM239A-203ENST00000456563 FOXP4Q8IVH2 680 aaPredicted RBP21.36■■□□□ 1.01
FAM239A-203ENST00000456563 DSCC1Q9BVC3 393 aa21.36■■□□□ 1.01
FAM239A-203ENST00000456563 ARPP21Q9UBL0 812 aaPredicted RBP21.36■■□□□ 1.01
FAM239A-203ENST00000456563 DDX60LQ5H9U9 1706 aaKnown RBP21.35■■□□□ 1.01
FAM239A-203ENST00000456563 TBC1D12O60347 775 aa21.35■■□□□ 1.01
FAM239A-203ENST00000456563 TDO2P48775 406 aa21.35■■□□□ 1.01
FAM239A-203ENST00000456563 FKBP1BP68106 108 aa21.35■■□□□ 1.01
FAM239A-203ENST00000456563 C12orf60Q5U649 245 aa21.35■■□□□ 1.01
FAM239A-203ENST00000456563 AMOTL1Q8IY63 956 aa21.35■■□□□ 1.01
FAM239A-203ENST00000456563 NAPBQ9H115 298 aa21.35■■□□□ 1.01
FAM239A-203ENST00000456563 EHD4Q9H223 541 aa21.35■■□□□ 1.01
FAM239A-203ENST00000456563 NAV1Q8NEY1 1877 aa21.35■■□□□ 1.01
FAM239A-203ENST00000456563 ZMYM6O95789 1325 aa21.34■■□□□ 1.01
FAM239A-203ENST00000456563 PPP1R12BO60237 982 aaPredicted RBP21.34■■□□□ 1.01
FAM239A-203ENST00000456563 PLCD1P51178 756 aa21.34■■□□□ 1.01
FAM239A-203ENST00000456563 MAP3K11Q16584 847 aa21.34■■□□□ 1.01
FAM239A-203ENST00000456563 GBA2Q9HCG7 927 aaPredicted RBP21.34■■□□□ 1.01
FAM239A-203ENST00000456563 HERC5Q9UII4 1024 aaKnown RBP21.34■■□□□ 1.01
FAM239A-203ENST00000456563 TAOK2Q9UL54 1235 aa21.34■■□□□ 1.01
FAM239A-203ENST00000456563 USP2O75604 605 aaPredicted RBP21.33■■□□□ 1.01
FAM239A-203ENST00000456563 FGAP02671 866 aa21.33■■□□□ 1.01
FAM239A-203ENST00000456563 CYP2D6P10635 497 aa21.33■■□□□ 1.01
FAM239A-203ENST00000456563 C1QTNF8P60827 252 aa21.33■■□□□ 1.01
FAM239A-203ENST00000456563 MIGA2Q7L4E1 593 aa21.33■■□□□ 1.01
FAM239A-203ENST00000456563 ARMC9Q7Z3E5 817 aa21.33■■□□□ 1.01
FAM239A-203ENST00000456563 C2orf69Q8N8R5 385 aa21.33■■□□□ 1.01
FAM239A-203ENST00000456563 ZNF341Q9BYN7 854 aa21.33■■□□□ 1.01
FAM239A-203ENST00000456563 MYH1P12882 1939 aa21.33■■□□□ 1
FAM239A-203ENST00000456563 TRPM7Q96QT4 1865 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms