RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TBC1D9Q6ZT07 1266 aa21.88■■□□□ 1.09
MSH6-207ENST00000456246 ZSCAN29Q8IWY8 852 aaPredicted RBP21.88■■□□□ 1.09
MSH6-207ENST00000456246 ZKSCAN4Q969J2 545 aaPredicted RBP21.88■■□□□ 1.09
MSH6-207ENST00000456246 NOL10Q9BSC4 688 aaKnown RBP21.88■■□□□ 1.09
MSH6-207ENST00000456246 ZCCHC17Q9NP64 241 aaKnown RBP21.88■■□□□ 1.09
MSH6-207ENST00000456246 CETPP11597 493 aa21.87■■□□□ 1.09
MSH6-207ENST00000456246 RHBDL3P58872 404 aa21.87■■□□□ 1.09
MSH6-207ENST00000456246 SNAPC2Q13487 334 aa21.87■■□□□ 1.09
MSH6-207ENST00000456246 ZNF384Q8TF68 577 aa21.87■■□□□ 1.09
MSH6-207ENST00000456246 CNKSR2Q8WXI2 1034 aa21.87■■□□□ 1.09
MSH6-207ENST00000456246 BRI3BPQ8WY22 251 aa21.87■■□□□ 1.09
MSH6-207ENST00000456246 EXOC6BQ9Y2D4 811 aa21.87■■□□□ 1.09
MSH6-207ENST00000456246 COL2A1P02458 1487 aaPredicted RBP21.87■■□□□ 1.09
MSH6-207ENST00000456246 ATRNL1Q5VV63 1379 aa21.87■■□□□ 1.09
MSH6-207ENST00000456246 PLCG2P16885 1265 aa21.86■■□□□ 1.09
MSH6-207ENST00000456246 INPP5BP32019 993 aa21.86■■□□□ 1.09
MSH6-207ENST00000456246 EAF2Q96CJ1 260 aaPredicted RBP21.86■■□□□ 1.09
MSH6-207ENST00000456246 PTPN18Q99952 460 aa21.86■■□□□ 1.09
MSH6-207ENST00000456246 BAG3O95817 575 aa21.85■■□□□ 1.09
MSH6-207ENST00000456246 CRHR2Q13324 411 aa21.85■■□□□ 1.09
MSH6-207ENST00000456246 NAA16Q6N069 864 aaPredicted RBP21.85■■□□□ 1.09
MSH6-207ENST00000456246 TMED8Q6PL24 325 aaPredicted RBP21.85■■□□□ 1.09
MSH6-207ENST00000456246 ZFPM1Q8IX07 1006 aa21.85■■□□□ 1.09
MSH6-207ENST00000456246 CCDC8Q9H0W5 538 aaPredicted RBP21.85■■□□□ 1.09
MSH6-207ENST00000456246 SNRKQ9NRH2 765 aa21.85■■□□□ 1.09
MSH6-207ENST00000456246 IRF6O14896 467 aa21.84■■□□□ 1.09
MSH6-207ENST00000456246 CYP2E1P05181 493 aaPredicted RBP21.84■■□□□ 1.09
MSH6-207ENST00000456246 MAP3K10Q02779 954 aa21.84■■□□□ 1.09
MSH6-207ENST00000456246 PICALMQ13492 652 aa21.84■■□□□ 1.09
MSH6-207ENST00000456246 AACSQ86V21 672 aa21.84■■□□□ 1.09
MSH6-207ENST00000456246 KIF1BPQ96EK5 621 aa21.84■■□□□ 1.09
MSH6-207ENST00000456246 ERO1AQ96HE7 468 aa21.84■■□□□ 1.09
MSH6-207ENST00000456246 R3HDMLQ9H3Y0 253 aa21.84■■□□□ 1.09
MSH6-207ENST00000456246 ZFYVE28Q9HCC9 887 aa21.84■■□□□ 1.09
MSH6-207ENST00000456246 DDX4Q9NQI0 724 aaKnown RBP21.84■■□□□ 1.09
MSH6-207ENST00000456246 TLR7Q9NYK1 1049 aaKnown RBP21.84■■□□□ 1.09
MSH6-207ENST00000456246 ZAP70P43403 619 aa21.83■■□□□ 1.09
MSH6-207ENST00000456246 TAF1CQ15572 869 aaPredicted RBP21.83■■□□□ 1.09
MSH6-207ENST00000456246 CLASRPQ8N2M8 674 aaKnown RBP21.83■■□□□ 1.09
MSH6-207ENST00000456246 RHPN1Q8TCX5 695 aa21.83■■□□□ 1.09
MSH6-207ENST00000456246 TBC1D12O60347 775 aa21.82■■□□□ 1.08
MSH6-207ENST00000456246 RAB11FIP3O75154 756 aa21.82■■□□□ 1.08
MSH6-207ENST00000456246 FBXO46Q6PJ61 603 aaPredicted RBP21.82■■□□□ 1.08
MSH6-207ENST00000456246 SH3BP5LQ7L8J4 393 aa21.82■■□□□ 1.08
MSH6-207ENST00000456246 CERS3Q8IU89 383 aa21.82■■□□□ 1.08
MSH6-207ENST00000456246 TEX11Q8IYF3 940 aa21.82■■□□□ 1.08
MSH6-207ENST00000456246 SCYL3Q8IZE3 742 aa21.82■■□□□ 1.08
MSH6-207ENST00000456246 KCNH4Q9UQ05 1017 aa21.82■■□□□ 1.08
MSH6-207ENST00000456246 DDTLA6NHG4 134 aaPredicted RBP21.81■■□□□ 1.08
MSH6-207ENST00000456246 PHF20L1A8MW92 1017 aa21.81■■□□□ 1.08
MSH6-207ENST00000456246 PPP4CP60510 307 aa21.81■■□□□ 1.08
MSH6-207ENST00000456246 OSBPL5Q9H0X9 879 aaPredicted RBP21.81■■□□□ 1.08
MSH6-207ENST00000456246 PICK1Q9NRD5 415 aa21.81■■□□□ 1.08
MSH6-207ENST00000456246 SP3Q02447 781 aa21.8■■□□□ 1.08
MSH6-207ENST00000456246 ARHGEF6Q15052 776 aa21.8■■□□□ 1.08
MSH6-207ENST00000456246 FAM43AQ8N2R8 423 aa21.8■■□□□ 1.08
MSH6-207ENST00000456246 CXCL11O14625 94 aa21.79■■□□□ 1.08
MSH6-207ENST00000456246 CTNND1O60716 968 aaKnown RBP21.79■■□□□ 1.08
MSH6-207ENST00000456246 SIRT2Q8IXJ6 389 aa21.79■■□□□ 1.08
MSH6-207ENST00000456246 DHX36Q9H2U1 1008 aaKnown RBP21.79■■□□□ 1.08
MSH6-207ENST00000456246 IL1RAPL2Q9NP60 686 aa21.79■■□□□ 1.08
MSH6-207ENST00000456246 PIH1D3Q9NQM4 214 aaKnown RBP21.79■■□□□ 1.08
MSH6-207ENST00000456246 AATFQ9NY61 560 aaKnown RBP eCLIP21.79■■□□□ 1.08
MSH6-207ENST00000456246 HPS5Q9UPZ3 1129 aa21.79■■□□□ 1.08
MSH6-207ENST00000456246 BTBD19C9JJ37 291 aa21.78■■□□□ 1.08
MSH6-207ENST00000456246 RGS19P49795 217 aa21.78■■□□□ 1.08
MSH6-207ENST00000456246 TTF1Q15361 905 aaPredicted RBP21.78■■□□□ 1.08
MSH6-207ENST00000456246 ANKRD23Q86SG2 305 aa21.78■■□□□ 1.08
MSH6-207ENST00000456246 SH3RF3Q8TEJ3 882 aaPredicted RBP21.78■■□□□ 1.08
MSH6-207ENST00000456246 HERC5Q9UII4 1024 aaKnown RBP21.78■■□□□ 1.08
MSH6-207ENST00000456246 DOCK1Q14185 1865 aa21.77■■□□□ 1.08
MSH6-207ENST00000456246 IDH1O75874 414 aaKnown RBP21.77■■□□□ 1.08
MSH6-207ENST00000456246 IFIT2P09913 472 aaKnown RBP21.77■■□□□ 1.08
MSH6-207ENST00000456246 MAP3K12Q12852 859 aa21.77■■□□□ 1.08
MSH6-207ENST00000456246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.77■■□□□ 1.08
MSH6-207ENST00000456246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.77■■□□□ 1.08
MSH6-207ENST00000456246 TRIM17Q9Y577 477 aa21.77■■□□□ 1.08
MSH6-207ENST00000456246 TLR2O60603 784 aa21.76■■□□□ 1.07
MSH6-207ENST00000456246 OTOP1Q7RTM1 612 aa21.76■■□□□ 1.07
MSH6-207ENST00000456246 PI4KBQ9UBF8 816 aa21.76■■□□□ 1.07
MSH6-207ENST00000456246 MYO5AQ9Y4I1 1855 aaKnown RBP21.75■■□□□ 1.07
MSH6-207ENST00000456246 PTPRAP18433 802 aa21.75■■□□□ 1.07
MSH6-207ENST00000456246 CYP7A1P22680 504 aa21.75■■□□□ 1.07
MSH6-207ENST00000456246 C20orf194Q5TEA3 1177 aa21.75■■□□□ 1.07
MSH6-207ENST00000456246 CD99L2Q8TCZ2 262 aa21.75■■□□□ 1.07
MSH6-207ENST00000456246 TBC1D2Q9BYX2 928 aa21.75■■□□□ 1.07
MSH6-207ENST00000456246 EFCC1Q9HA90 598 aa21.75■■□□□ 1.07
MSH6-207ENST00000456246 FOCADQ5VW36 1801 aa21.75■■□□□ 1.07
MSH6-207ENST00000456246 APBB1O00213 710 aa21.74■■□□□ 1.07
MSH6-207ENST00000456246 FASTKD5Q7L8L6 764 aaKnown RBP21.74■■□□□ 1.07
MSH6-207ENST00000456246 ADGRA1Q86SQ6 560 aa21.74■■□□□ 1.07
MSH6-207ENST00000456246 ZHX2Q9Y6X8 837 aa21.74■■□□□ 1.07
MSH6-207ENST00000456246 FLT1P17948 1338 aa21.74■■□□□ 1.07
MSH6-207ENST00000456246 PDHXO00330 501 aa21.73■■□□□ 1.07
MSH6-207ENST00000456246 MAGEB6Q8N7X4 407 aa21.73■■□□□ 1.07
MSH6-207ENST00000456246 TGFBRAP1Q8WUH2 860 aa21.73■■□□□ 1.07
MSH6-207ENST00000456246 A0A0G2JLL6 359 aaPredicted RBP21.72■■□□□ 1.07
MSH6-207ENST00000456246 MLLT1Q03111 559 aaPredicted RBP21.72■■□□□ 1.07
MSH6-207ENST00000456246 KIF22Q14807 665 aa21.72■■□□□ 1.07
MSH6-207ENST00000456246 PRRT2Q7Z6L0 340 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms