RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 PKN2Q16513 984 aaKnown RBP21.7■■□□□ 1.06
COL13A1-206ENST00000456019 CCL15Q16663 113 aa21.7■■□□□ 1.06
COL13A1-206ENST00000456019 ZSCAN29Q8IWY8 852 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-206ENST00000456019 BRI3BPQ8WY22 251 aa21.7■■□□□ 1.06
COL13A1-206ENST00000456019 EAF2Q96CJ1 260 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-206ENST00000456019 CCDC8Q9H0W5 538 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-206ENST00000456019 HMMRO75330 724 aa21.69■■□□□ 1.06
COL13A1-206ENST00000456019 PPATQ06203 517 aa21.69■■□□□ 1.06
COL13A1-206ENST00000456019 PPIL2Q13356 520 aa21.69■■□□□ 1.06
COL13A1-206ENST00000456019 PICALMQ13492 652 aa21.69■■□□□ 1.06
COL13A1-206ENST00000456019 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-206ENST00000456019 DDX4Q9NQI0 724 aaKnown RBP21.69■■□□□ 1.06
COL13A1-206ENST00000456019 TLR7Q9NYK1 1049 aaKnown RBP21.69■■□□□ 1.06
COL13A1-206ENST00000456019 AK9Q5TCS8 1911 aa21.68■■□□□ 1.06
COL13A1-206ENST00000456019 IGSF3O75054 1194 aa21.68■■□□□ 1.06
COL13A1-206ENST00000456019 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
COL13A1-206ENST00000456019 CYP2E1P05181 493 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-206ENST00000456019 CETPP11597 493 aa21.68■■□□□ 1.06
COL13A1-206ENST00000456019 CRHR2Q13324 411 aa21.68■■□□□ 1.06
COL13A1-206ENST00000456019 SNAPC2Q13487 334 aa21.68■■□□□ 1.06
COL13A1-206ENST00000456019 NOL9Q5SY16 702 aaKnown RBP21.68■■□□□ 1.06
COL13A1-206ENST00000456019 NOL10Q9BSC4 688 aaKnown RBP21.68■■□□□ 1.06
COL13A1-206ENST00000456019 ATRNL1Q5VV63 1379 aa21.68■■□□□ 1.06
COL13A1-206ENST00000456019 IRF6O14896 467 aa21.67■■□□□ 1.06
COL13A1-206ENST00000456019 PDE3AQ14432 1141 aa21.67■■□□□ 1.06
COL13A1-206ENST00000456019 NAA16Q6N069 864 aaPredicted RBP21.67■■□□□ 1.06
COL13A1-206ENST00000456019 SH3BP5LQ7L8J4 393 aa21.67■■□□□ 1.06
COL13A1-206ENST00000456019 DOCK2Q92608 1830 aa21.66■■□□□ 1.06
COL13A1-206ENST00000456019 DDTLA6NHG4 134 aaPredicted RBP21.66■■□□□ 1.06
COL13A1-206ENST00000456019 ZAP70P43403 619 aa21.66■■□□□ 1.06
COL13A1-206ENST00000456019 AACSQ86V21 672 aa21.66■■□□□ 1.06
COL13A1-206ENST00000456019 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
COL13A1-206ENST00000456019 BAG3O95817 575 aa21.65■■□□□ 1.06
COL13A1-206ENST00000456019 MAP3K10Q02779 954 aa21.65■■□□□ 1.06
COL13A1-206ENST00000456019 ZFYVE28Q9HCC9 887 aa21.65■■□□□ 1.06
COL13A1-206ENST00000456019 ZCCHC17Q9NP64 241 aaKnown RBP21.65■■□□□ 1.06
COL13A1-206ENST00000456019 MAST2Q6P0Q8 1798 aa21.65■■□□□ 1.06
COL13A1-206ENST00000456019 PHF20L1A8MW92 1017 aa21.64■■□□□ 1.05
COL13A1-206ENST00000456019 PLCG2P16885 1265 aa21.64■■□□□ 1.05
COL13A1-206ENST00000456019 TAF1CQ15572 869 aaPredicted RBP21.64■■□□□ 1.05
COL13A1-206ENST00000456019 SIRT2Q8IXJ6 389 aa21.64■■□□□ 1.05
COL13A1-206ENST00000456019 TEX11Q8IYF3 940 aa21.64■■□□□ 1.05
COL13A1-206ENST00000456019 FAM43AQ8N2R8 423 aa21.64■■□□□ 1.05
COL13A1-206ENST00000456019 KIF1BPQ96EK5 621 aa21.64■■□□□ 1.05
COL13A1-206ENST00000456019 ERO1AQ96HE7 468 aa21.64■■□□□ 1.05
COL13A1-206ENST00000456019 IL1RAPL2Q9NP60 686 aa21.64■■□□□ 1.05
COL13A1-206ENST00000456019 C20orf194Q5TEA3 1177 aa21.63■■□□□ 1.05
COL13A1-206ENST00000456019 FBXO46Q6PJ61 603 aaPredicted RBP21.63■■□□□ 1.05
COL13A1-206ENST00000456019 SCYL3Q8IZE3 742 aa21.63■■□□□ 1.05
COL13A1-206ENST00000456019 CLASRPQ8N2M8 674 aaKnown RBP21.63■■□□□ 1.05
COL13A1-206ENST00000456019 OSBPL5Q9H0X9 879 aaPredicted RBP21.63■■□□□ 1.05
COL13A1-206ENST00000456019 PIH1D3Q9NQM4 214 aaKnown RBP21.63■■□□□ 1.05
COL13A1-206ENST00000456019 PICK1Q9NRD5 415 aa21.63■■□□□ 1.05
COL13A1-206ENST00000456019 KCNH4Q9UQ05 1017 aa21.63■■□□□ 1.05
COL13A1-206ENST00000456019 COL2A1P02458 1487 aaPredicted RBP21.63■■□□□ 1.05
COL13A1-206ENST00000456019 BTBD19C9JJ37 291 aa21.62■■□□□ 1.05
COL13A1-206ENST00000456019 PPP4CP60510 307 aa21.62■■□□□ 1.05
COL13A1-206ENST00000456019 SP3Q02447 781 aa21.62■■□□□ 1.05
COL13A1-206ENST00000456019 SH3RF3Q8TEJ3 882 aaPredicted RBP21.62■■□□□ 1.05
COL13A1-206ENST00000456019 AATFQ9NY61 560 aaKnown RBP eCLIP21.62■■□□□ 1.05
COL13A1-206ENST00000456019 HPS5Q9UPZ3 1129 aa21.62■■□□□ 1.05
COL13A1-206ENST00000456019 APBB1O00213 710 aa21.61■■□□□ 1.05
COL13A1-206ENST00000456019 TBC1D12O60347 775 aa21.61■■□□□ 1.05
COL13A1-206ENST00000456019 CTNND1O60716 968 aaKnown RBP21.61■■□□□ 1.05
COL13A1-206ENST00000456019 RAB11FIP3O75154 756 aa21.61■■□□□ 1.05
COL13A1-206ENST00000456019 IDH1O75874 414 aaKnown RBP21.6■■□□□ 1.05
COL13A1-206ENST00000456019 RGS19P49795 217 aa21.6■■□□□ 1.05
COL13A1-206ENST00000456019 ADGRA1Q86SQ6 560 aa21.6■■□□□ 1.05
COL13A1-206ENST00000456019 CD99L2Q8TCZ2 262 aa21.6■■□□□ 1.05
COL13A1-206ENST00000456019 TRIM17Q9Y577 477 aa21.6■■□□□ 1.05
COL13A1-206ENST00000456019 CXCL11O14625 94 aa21.59■■□□□ 1.05
COL13A1-206ENST00000456019 IFIT2P09913 472 aaKnown RBP21.59■■□□□ 1.05
COL13A1-206ENST00000456019 SLURP2P0DP57 97 aa21.59■■□□□ 1.05
COL13A1-206ENST00000456019 PTPRAP18433 802 aa21.59■■□□□ 1.05
COL13A1-206ENST00000456019 TMED8Q6PL24 325 aaPredicted RBP21.59■■□□□ 1.05
COL13A1-206ENST00000456019 OTOP1Q7RTM1 612 aa21.59■■□□□ 1.05
COL13A1-206ENST00000456019 ANKRD23Q86SG2 305 aa21.59■■□□□ 1.05
COL13A1-206ENST00000456019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.59■■□□□ 1.05
COL13A1-206ENST00000456019 TLR2O60603 784 aa21.58■■□□□ 1.05
COL13A1-206ENST00000456019 CYP7A1P22680 504 aa21.58■■□□□ 1.05
COL13A1-206ENST00000456019 MAP3K12Q12852 859 aa21.58■■□□□ 1.05
COL13A1-206ENST00000456019 TGFBRAP1Q8WUH2 860 aa21.58■■□□□ 1.05
COL13A1-206ENST00000456019 DHX36Q9H2U1 1008 aaKnown RBP21.58■■□□□ 1.05
COL13A1-206ENST00000456019 NDUFB9Q9Y6M9 179 aa21.58■■□□□ 1.05
COL13A1-206ENST00000456019 ZHX2Q9Y6X8 837 aa21.58■■□□□ 1.05
COL13A1-206ENST00000456019 ARHGEF6Q15052 776 aa21.57■■□□□ 1.04
COL13A1-206ENST00000456019 CERS3Q8IU89 383 aa21.57■■□□□ 1.04
COL13A1-206ENST00000456019 ANTXR1Q9H6X2 564 aa21.57■■□□□ 1.04
COL13A1-206ENST00000456019 EFCC1Q9HA90 598 aa21.57■■□□□ 1.04
COL13A1-206ENST00000456019 PI4KBQ9UBF8 816 aa21.57■■□□□ 1.04
COL13A1-206ENST00000456019 PDHXO00330 501 aa21.56■■□□□ 1.04
COL13A1-206ENST00000456019 TTF1Q15361 905 aaPredicted RBP21.56■■□□□ 1.04
COL13A1-206ENST00000456019 MAGEB6Q8N7X4 407 aa21.56■■□□□ 1.04
COL13A1-206ENST00000456019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.56■■□□□ 1.04
COL13A1-206ENST00000456019 HERC5Q9UII4 1024 aaKnown RBP21.56■■□□□ 1.04
COL13A1-206ENST00000456019 AFG3L2Q9Y4W6 797 aa21.56■■□□□ 1.04
COL13A1-206ENST00000456019 MYO5AQ9Y4I1 1855 aaKnown RBP21.56■■□□□ 1.04
COL13A1-206ENST00000456019 FLT1P17948 1338 aa21.55■■□□□ 1.04
COL13A1-206ENST00000456019 FAM196BA6NMK8 535 aa21.55■■□□□ 1.04
COL13A1-206ENST00000456019 MAPK8IP2Q13387 824 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms