RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 GGA3Q9NZ52 723 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 PGAP2Q9UHJ9 254 aa12.86□□□□□ -0.35
SYPL1-202ENST00000455385 DLK2Q6UY11 383 aa12.85□□□□□ -0.35
SYPL1-202ENST00000455385 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
SYPL1-202ENST00000455385 SH3BP5LQ7L8J4 393 aa12.85□□□□□ -0.35
SYPL1-202ENST00000455385 BAZ2AQ9UIF9 1905 aaKnown RBP12.85□□□□□ -0.35
SYPL1-202ENST00000455385 CYP2D7A0A087X1C5 515 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
SYPL1-202ENST00000455385 ALX1Q15699 326 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 SLC4A8Q2Y0W8 1093 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 FKBP1CQ5VVH2 108 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 PNMA8AQ86V59 439 aaPredicted RBP12.84□□□□□ -0.35
SYPL1-202ENST00000455385 CDAN1Q8IWY9 1227 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 USP26Q9BXU7 913 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
SYPL1-202ENST00000455385 PALD1Q9ULE6 856 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 DDTLA6NHG4 134 aaPredicted RBP12.84□□□□□ -0.35
SYPL1-202ENST00000455385 USP17L12C9JPN9 530 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 USP17L21D6R901 530 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 ENTPD3O75355 529 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 CYP2D6P10635 497 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 GIMAP6Q6P9H5 292 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
SYPL1-202ENST00000455385 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 OSBPL5Q9H0X9 879 aaPredicted RBP12.84□□□□□ -0.35
SYPL1-202ENST00000455385 MCM9Q9NXL9 1143 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 TMOD2Q9NZR1 351 aa12.84□□□□□ -0.35
SYPL1-202ENST00000455385 RPAP1Q9BWH6 1393 aaPredicted RBP12.83□□□□□ -0.35
SYPL1-202ENST00000455385 REC8O95072 547 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 SLURP2P0DP57 97 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 PLCD1P51178 756 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 RASA3Q14644 834 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 PRAMEF18Q5VWM3 479 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 FAM83AQ86UY5 434 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 FAM151AQ8WW52 585 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 DEFB129Q9H1M3 183 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 RBM8AQ9Y5S9 174 aaKnown RBP12.83□□□□□ -0.36
SYPL1-202ENST00000455385 YY1P25490 414 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 NECTIN1Q15223 517 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 NAPBQ9H115 298 aa12.83□□□□□ -0.36
SYPL1-202ENST00000455385 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
SYPL1-202ENST00000455385 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
SYPL1-202ENST00000455385 TDO2P48775 406 aa12.82□□□□□ -0.36
SYPL1-202ENST00000455385 DCPSQ96C86 337 aaKnown RBP12.82□□□□□ -0.36
SYPL1-202ENST00000455385 TEPSINQ96N21 525 aa12.82□□□□□ -0.36
SYPL1-202ENST00000455385 NACAP1Q9BZK3 213 aa12.82□□□□□ -0.36
SYPL1-202ENST00000455385 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
SYPL1-202ENST00000455385 TAF6LQ9Y6J9 622 aa12.82□□□□□ -0.36
SYPL1-202ENST00000455385 MYH1P12882 1939 aa12.82□□□□□ -0.36
SYPL1-202ENST00000455385 MINDY4BA8MYZ0 360 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 KIF3CO14782 793 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 MAP1SQ66K74 1059 aaPredicted RBP12.81□□□□□ -0.36
SYPL1-202ENST00000455385 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
SYPL1-202ENST00000455385 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 TACC3Q9Y6A5 838 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
SYPL1-202ENST00000455385 ADM5C9JUS6 153 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 CYP21A2P08686 494 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 HAND2P61296 217 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 TNFAIP1Q13829 316 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 KRT26Q7Z3Y9 468 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 USP48Q86UV5 1035 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 INCENPQ9NQS7 918 aa12.81□□□□□ -0.36
SYPL1-202ENST00000455385 ZMYM6O95789 1325 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 NAV1Q8NEY1 1877 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 DDX60LQ5H9U9 1706 aaKnown RBP12.8□□□□□ -0.36
SYPL1-202ENST00000455385 POLR3DP05423 398 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-202ENST00000455385 TNNI2P48788 182 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 LDHDQ86WU2 507 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-202ENST00000455385 DYNLL2Q96FJ2 89 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 GLIS2Q9BZE0 524 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-202ENST00000455385 ATRNL1Q5VV63 1379 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 SLC27A2O14975 620 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 HSPA4P34932 840 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 CTDSPL2Q05D32 466 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 PPARAQ07869 468 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-202ENST00000455385 CREB3L3Q68CJ9 461 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 STK11IPQ8N1F8 1099 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-202ENST00000455385 DHX36Q9H2U1 1008 aaKnown RBP12.8□□□□□ -0.36
SYPL1-202ENST00000455385 ARPP21Q9UBL0 812 aaPredicted RBP12.8□□□□□ -0.36
SYPL1-202ENST00000455385 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
SYPL1-202ENST00000455385 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
SYPL1-202ENST00000455385 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYPL1-202ENST00000455385 CSRNP1Q96S65 589 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 ZNF213O14771 459 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 GABPAQ06546 454 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 TBC1D10CQ8IV04 446 aa12.79□□□□□ -0.36
SYPL1-202ENST00000455385 NKX2-3Q8TAU0 364 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms