RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 ZNF384Q8TF68 577 aa21.57■■□□□ 1.04
COPS7A-202ENST00000455113 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.57■■□□□ 1.04
COPS7A-202ENST00000455113 WNK4Q96J92 1243 aa21.57■■□□□ 1.04
COPS7A-202ENST00000455113 ELP3Q9H9T3 547 aa21.57■■□□□ 1.04
COPS7A-202ENST00000455113 MAST2Q6P0Q8 1798 aa21.57■■□□□ 1.04
COPS7A-202ENST00000455113 TMED8Q6PL24 325 aaPredicted RBP21.56■■□□□ 1.04
COPS7A-202ENST00000455113 DCTPP1Q9H773 170 aa21.56■■□□□ 1.04
COPS7A-202ENST00000455113 PIH1D3Q9NQM4 214 aaKnown RBP21.56■■□□□ 1.04
COPS7A-202ENST00000455113 RNF186Q9NXI6 227 aa21.56■■□□□ 1.04
COPS7A-202ENST00000455113 AATFQ9NY61 560 aaKnown RBP eCLIP21.56■■□□□ 1.04
COPS7A-202ENST00000455113 WDHD1O75717 1129 aaPredicted RBP21.55■■□□□ 1.04
COPS7A-202ENST00000455113 TM4SF4P48230 202 aa21.55■■□□□ 1.04
COPS7A-202ENST00000455113 VGLL4Q14135 290 aa21.55■■□□□ 1.04
COPS7A-202ENST00000455113 TEX11Q8IYF3 940 aa21.55■■□□□ 1.04
COPS7A-202ENST00000455113 OPTNQ96CV9 577 aa21.55■■□□□ 1.04
COPS7A-202ENST00000455113 RHBDL3P58872 404 aa21.55■■□□□ 1.04
COPS7A-202ENST00000455113 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.55■■□□□ 1.04
COPS7A-202ENST00000455113 CERS3Q8IU89 383 aa21.55■■□□□ 1.04
COPS7A-202ENST00000455113 TNS4Q8IZW8 715 aa21.55■■□□□ 1.04
COPS7A-202ENST00000455113 DNAJC2Q99543 621 aaKnown RBP21.55■■□□□ 1.04
COPS7A-202ENST00000455113 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
COPS7A-202ENST00000455113 NDUFB9Q9Y6M9 179 aa21.55■■□□□ 1.04
COPS7A-202ENST00000455113 OTOFQ9HC10 1997 aa21.54■■□□□ 1.04
COPS7A-202ENST00000455113 NPM3O75607 178 aaKnown RBP21.54■■□□□ 1.04
COPS7A-202ENST00000455113 CYP7A1P22680 504 aa21.54■■□□□ 1.04
COPS7A-202ENST00000455113 MYO5AQ9Y4I1 1855 aaKnown RBP21.54■■□□□ 1.04
COPS7A-202ENST00000455113 ALDH1A1P00352 501 aa21.53■■□□□ 1.04
COPS7A-202ENST00000455113 OTUD7BQ6GQQ9 843 aa21.53■■□□□ 1.04
COPS7A-202ENST00000455113 ZFPM1Q8IX07 1006 aa21.53■■□□□ 1.04
COPS7A-202ENST00000455113 SMC5Q8IY18 1101 aa21.53■■□□□ 1.04
COPS7A-202ENST00000455113 MAGEB6Q8N7X4 407 aa21.53■■□□□ 1.04
COPS7A-202ENST00000455113 GCC1Q96CN9 775 aa21.53■■□□□ 1.04
COPS7A-202ENST00000455113 GPATCH3Q96I76 525 aa21.53■■□□□ 1.04
COPS7A-202ENST00000455113 ANTXR1Q9H6X2 564 aa21.52■■□□□ 1.04
COPS7A-202ENST00000455113 DDX4Q9NQI0 724 aaKnown RBP21.52■■□□□ 1.04
COPS7A-202ENST00000455113 DOCK2Q92608 1830 aa21.52■■□□□ 1.04
COPS7A-202ENST00000455113 SMARCA5O60264 1052 aaPredicted RBP21.52■■□□□ 1.03
COPS7A-202ENST00000455113 PPP4CP60510 307 aa21.52■■□□□ 1.03
COPS7A-202ENST00000455113 SH3RF3Q8TEJ3 882 aaPredicted RBP21.52■■□□□ 1.03
COPS7A-202ENST00000455113 ZKSCAN4Q969J2 545 aaPredicted RBP21.52■■□□□ 1.03
COPS7A-202ENST00000455113 OTUD5Q96G74 571 aa21.52■■□□□ 1.03
COPS7A-202ENST00000455113 BOLA2Q9H3K6 86 aa21.52■■□□□ 1.03
COPS7A-202ENST00000455113 RFX7Q2KHR2 1363 aa21.51■■□□□ 1.03
COPS7A-202ENST00000455113 GOLIM4O00461 696 aa21.51■■□□□ 1.03
COPS7A-202ENST00000455113 ATP5JP18859 108 aa21.51■■□□□ 1.03
COPS7A-202ENST00000455113 ERO1BQ86YB8 467 aa21.51■■□□□ 1.03
COPS7A-202ENST00000455113 DDTLA6NHG4 134 aaPredicted RBP21.5■■□□□ 1.03
COPS7A-202ENST00000455113 GTF2A2P52657 109 aa21.5■■□□□ 1.03
COPS7A-202ENST00000455113 OSBPL5Q9H0X9 879 aaPredicted RBP21.5■■□□□ 1.03
COPS7A-202ENST00000455113 ADGRA1Q86SQ6 560 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 DHX36Q9H2U1 1008 aaKnown RBP21.49■■□□□ 1.03
COPS7A-202ENST00000455113 PAG1Q9NWQ8 432 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 SNCAIPQ9Y6H5 919 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 SPDYE5A6NIY4 337 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 INPP5BP32019 993 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 SLC9C2Q5TAH2 1124 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 IFNL1Q8IU54 200 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 TGFBRAP1Q8WUH2 860 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.49■■□□□ 1.03
COPS7A-202ENST00000455113 ZNF112Q9UJU3 913 aa21.49■■□□□ 1.03
COPS7A-202ENST00000455113 ATRNL1Q5VV63 1379 aa21.48■■□□□ 1.03
COPS7A-202ENST00000455113 SH3BP5LQ7L8J4 393 aa21.48■■□□□ 1.03
COPS7A-202ENST00000455113 MIGA1Q8NAN2 632 aa21.48■■□□□ 1.03
COPS7A-202ENST00000455113 ECHDC1Q9NTX5 307 aa21.48■■□□□ 1.03
COPS7A-202ENST00000455113 GJA5P36382 358 aa21.47■■□□□ 1.03
COPS7A-202ENST00000455113 PPATQ06203 517 aa21.47■■□□□ 1.03
COPS7A-202ENST00000455113 HAUS7Q99871 368 aa21.47■■□□□ 1.03
COPS7A-202ENST00000455113 TRIM34Q9BYJ4 488 aa21.47■■□□□ 1.03
COPS7A-202ENST00000455113 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.47■■□□□ 1.03
COPS7A-202ENST00000455113 PICK1Q9NRD5 415 aa21.47■■□□□ 1.03
COPS7A-202ENST00000455113 CASP8AP2Q9UKL3 1982 aa21.47■■□□□ 1.03
COPS7A-202ENST00000455113 COL2A1P02458 1487 aaPredicted RBP21.47■■□□□ 1.03
COPS7A-202ENST00000455113 TBC1D8O95759 1140 aa21.46■■□□□ 1.03
COPS7A-202ENST00000455113 USP5P45974 858 aa21.46■■□□□ 1.03
COPS7A-202ENST00000455113 MAPKAPK5Q8IW41 473 aa21.46■■□□□ 1.03
COPS7A-202ENST00000455113 CNKSR2Q8WXI2 1034 aa21.46■■□□□ 1.03
COPS7A-202ENST00000455113 TBC1D12O60347 775 aa21.46■■□□□ 1.03
COPS7A-202ENST00000455113 DYNLL1P63167 89 aaKnown RBP21.46■■□□□ 1.03
COPS7A-202ENST00000455113 SNAPC2Q13487 334 aa21.46■■□□□ 1.03
COPS7A-202ENST00000455113 NOL9Q5SY16 702 aaKnown RBP21.46■■□□□ 1.03
COPS7A-202ENST00000455113 PI4KBQ9UBF8 816 aa21.46■■□□□ 1.03
COPS7A-202ENST00000455113 FLT1P17948 1338 aa21.45■■□□□ 1.02
COPS7A-202ENST00000455113 CCL15-CCL14A0A0B4J2E2 113 aa21.45■■□□□ 1.02
COPS7A-202ENST00000455113 HLA-DOAP06340 250 aa21.45■■□□□ 1.02
COPS7A-202ENST00000455113 CETPP11597 493 aa21.45■■□□□ 1.02
COPS7A-202ENST00000455113 PPIL2Q13356 520 aa21.45■■□□□ 1.02
COPS7A-202ENST00000455113 CCL15Q16663 113 aa21.45■■□□□ 1.02
COPS7A-202ENST00000455113 ANKRD45Q5TZF3 282 aa21.45■■□□□ 1.02
COPS7A-202ENST00000455113 LAMB1P07942 1786 aa21.45■■□□□ 1.02
COPS7A-202ENST00000455113 MAGEB6P1A0A0J9YX57 407 aa21.44■■□□□ 1.02
COPS7A-202ENST00000455113 IRF6O14896 467 aa21.44■■□□□ 1.02
COPS7A-202ENST00000455113 CTNND1O60716 968 aaKnown RBP21.44■■□□□ 1.02
COPS7A-202ENST00000455113 PDE6AP16499 860 aa21.44■■□□□ 1.02
COPS7A-202ENST00000455113 MAP3K10Q02779 954 aa21.44■■□□□ 1.02
COPS7A-202ENST00000455113 NUCB1Q02818 461 aa21.44■■□□□ 1.02
COPS7A-202ENST00000455113 ZSCAN25Q6NSZ9 544 aa21.44■■□□□ 1.02
COPS7A-202ENST00000455113 SCYL3Q8IZE3 742 aa21.44■■□□□ 1.02
COPS7A-202ENST00000455113 HERC5Q9UII4 1024 aaKnown RBP21.44■■□□□ 1.02
COPS7A-202ENST00000455113 ZNF532Q9HCE3 1301 aa21.44■■□□□ 1.02
COPS7A-202ENST00000455113 TESPA1A2RU30 521 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms