RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 ARPP21Q9UBL0 812 aaPredicted RBP19.83■□□□□ 0.76
LINC00963-208ENST00000454968 CNOT7Q9UIV1 285 aaKnown RBP19.83■□□□□ 0.76
LINC00963-208ENST00000454968 GJA3Q9Y6H8 435 aa19.83■□□□□ 0.76
LINC00963-208ENST00000454968 WDR90Q96KV7 1748 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 SHTN1A0MZ66 631 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 WNT10BO00744 389 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 ZNF213O14771 459 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 TDO2P48775 406 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 RABEP1Q15276 862 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 ADCK5Q3MIX3 580 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 STOX1Q6ZVD7 989 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 MICALL2Q8IY33 904 aa19.82■□□□□ 0.76
LINC00963-208ENST00000454968 DDX4Q9NQI0 724 aaKnown RBP19.82■□□□□ 0.76
LINC00963-208ENST00000454968 ATRNL1Q5VV63 1379 aa19.81■□□□□ 0.76
LINC00963-208ENST00000454968 USP17L12C9JPN9 530 aa19.81■□□□□ 0.76
LINC00963-208ENST00000454968 USP17L21D6R901 530 aa19.81■□□□□ 0.76
LINC00963-208ENST00000454968 USP5P45974 858 aa19.81■□□□□ 0.76
LINC00963-208ENST00000454968 C12orf60Q5U649 245 aa19.81■□□□□ 0.76
LINC00963-208ENST00000454968 ZSWIM6Q9HCJ5 1215 aa19.81■□□□□ 0.76
LINC00963-208ENST00000454968 FAM198AQ9UFP1 575 aa19.81■□□□□ 0.76
LINC00963-208ENST00000454968 E7EWF7 191 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 ENTPD3O75355 529 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 DDNO94850 711 aaPredicted RBP19.8■□□□□ 0.76
LINC00963-208ENST00000454968 EGFRP00533 1210 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 PCP11498 1178 aaKnown RBP19.8■□□□□ 0.76
LINC00963-208ENST00000454968 RBM5P52756 815 aaKnown RBP eCLIP19.8■□□□□ 0.76
LINC00963-208ENST00000454968 PPARAQ07869 468 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 NFIAQ12857 509 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 TBC1D10CQ8IV04 446 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 STAG1Q8WVM7 1258 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 DDRGK1Q96HY6 314 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 OSBPL5Q9H0X9 879 aaPredicted RBP19.8■□□□□ 0.76
LINC00963-208ENST00000454968 TDRD3Q9H7E2 651 aaKnown RBP19.8■□□□□ 0.76
LINC00963-208ENST00000454968 TAOK2Q9UL54 1235 aa19.8■□□□□ 0.76
LINC00963-208ENST00000454968 MAPKAPK5Q8IW41 473 aa19.79■□□□□ 0.76
LINC00963-208ENST00000454968 ZNF70Q9UC06 446 aaPredicted RBP19.79■□□□□ 0.76
LINC00963-208ENST00000454968 TACC3Q9Y6A5 838 aa19.79■□□□□ 0.76
LINC00963-208ENST00000454968 GLTPD2A6NH11 291 aa19.78■□□□□ 0.76
LINC00963-208ENST00000454968 NT5C2P49902 561 aa19.78■□□□□ 0.76
LINC00963-208ENST00000454968 HAND2P61296 217 aa19.78■□□□□ 0.76
LINC00963-208ENST00000454968 MCM9Q9NXL9 1143 aa19.78■□□□□ 0.76
LINC00963-208ENST00000454968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.78■□□□□ 0.762e-8■■■■■ 48.5
LINC00963-208ENST00000454968 H7C1D1 291 aa19.77■□□□□ 0.76
LINC00963-208ENST00000454968 PSMA5P28066 241 aa19.77■□□□□ 0.76
LINC00963-208ENST00000454968 COL9A3Q14050 684 aaPredicted RBP19.77■□□□□ 0.76
LINC00963-208ENST00000454968 NBPF9Q3BBW0 867 aa19.77■□□□□ 0.76
LINC00963-208ENST00000454968 AKNAD1Q5T1N1 836 aa19.77■□□□□ 0.76
LINC00963-208ENST00000454968 DPY19L2Q6NUT2 758 aa19.77■□□□□ 0.76
LINC00963-208ENST00000454968 FAM83AQ86UY5 434 aa19.77■□□□□ 0.76
LINC00963-208ENST00000454968 TTC14Q96N46 770 aa19.77■□□□□ 0.76
LINC00963-208ENST00000454968 CNTNAP1P78357 1384 aa19.77■□□□□ 0.76
LINC00963-208ENST00000454968 SMIM22K7EJ46 135 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 HMGB1P09429 215 aaKnown RBP19.76■□□□□ 0.75
LINC00963-208ENST00000454968 GABPAQ06546 454 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 KIF4BQ2VIQ3 1234 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 SAMD7Q7Z3H4 446 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 METTL16Q86W50 562 aaKnown RBP19.76■□□□□ 0.75
LINC00963-208ENST00000454968 FBXL16Q8N461 479 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 SNX21Q969T3 373 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 JAKMIP1Q96N16 626 aaKnown RBP19.76■□□□□ 0.75
LINC00963-208ENST00000454968 NEK1Q96PY6 1258 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 ALDH8A1Q9H2A2 487 aaPredicted RBP19.76■□□□□ 0.75
LINC00963-208ENST00000454968 DHX36Q9H2U1 1008 aaKnown RBP19.76■□□□□ 0.75
LINC00963-208ENST00000454968 PGAP2Q9UHJ9 254 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 MYH8P13535 1937 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 WDR19Q8NEZ3 1342 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 CYP2D7A0A087X1C5 515 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 ORC4O43929 436 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 CYP2D6P10635 497 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 EPS15P42566 896 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 PLCD1P51178 756 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 EXOSC10Q01780 885 aaKnown RBP19.76■□□□□ 0.75
LINC00963-208ENST00000454968 EVX2Q03828 476 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 RUFY3Q7L099 469 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 MB21D2Q8IYB1 491 aaPredicted RBP19.76■□□□□ 0.75
LINC00963-208ENST00000454968 EHD4Q9H223 541 aa19.76■□□□□ 0.75
LINC00963-208ENST00000454968 RNF41Q9H4P4 317 aaPredicted RBP19.76■□□□□ 0.75
LINC00963-208ENST00000454968 POLR2AP24928 1970 aaKnown RBP19.75■□□□□ 0.75
LINC00963-208ENST00000454968 MYO1BO43795 1136 aa19.75■□□□□ 0.75
LINC00963-208ENST00000454968 CACNB3P54284 484 aa19.75■□□□□ 0.75
LINC00963-208ENST00000454968 CTDSPL2Q05D32 466 aa19.75■□□□□ 0.75
LINC00963-208ENST00000454968 SH3BP5LQ7L8J4 393 aa19.75■□□□□ 0.75
LINC00963-208ENST00000454968 ZFPM1Q8IX07 1006 aa19.75■□□□□ 0.75
LINC00963-208ENST00000454968 FAM151AQ8WW52 585 aa19.75■□□□□ 0.75
LINC00963-208ENST00000454968 AGXT2Q9BYV1 514 aa19.75■□□□□ 0.75
LINC00963-208ENST00000454968 CNNM2Q9H8M5 875 aa19.75■□□□□ 0.75
LINC00963-208ENST00000454968 ADARB2Q9NS39 739 aaKnown RBP19.75■□□□□ 0.75
LINC00963-208ENST00000454968 NEDD4P46934 1319 aa19.74■□□□□ 0.75
LINC00963-208ENST00000454968 GREB1LQ9C091 1923 aaPredicted RBP19.74■□□□□ 0.75
LINC00963-208ENST00000454968 MINDY4BA8MYZ0 360 aa19.74■□□□□ 0.75
LINC00963-208ENST00000454968 CASTP20810 708 aaKnown RBP19.74■□□□□ 0.75
LINC00963-208ENST00000454968 RPS6KB1P23443 525 aa19.74■□□□□ 0.75
LINC00963-208ENST00000454968 HIRAP54198 1017 aaPredicted RBP19.74■□□□□ 0.75
LINC00963-208ENST00000454968 PICALMQ13492 652 aa19.74■□□□□ 0.75
LINC00963-208ENST00000454968 TBC1D10BQ4KMP7 808 aaPredicted RBP19.74■□□□□ 0.75
LINC00963-208ENST00000454968 C16orf86Q6ZW13 317 aa19.74■□□□□ 0.75
LINC00963-208ENST00000454968 TTC6Q86TZ1 520 aa19.74■□□□□ 0.75
LINC00963-208ENST00000454968 NCOA7Q8NI08 942 aa19.74■□□□□ 0.75
LINC00963-208ENST00000454968 NKX2-3Q8TAU0 364 aa19.74■□□□□ 0.75
LINC00963-208ENST00000454968 TRPM4Q8TD43 1214 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms