RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 PPIL2Q13356 520 aa13.2□□□□□ -0.3
LMCD1-205ENST00000454244 ERC1Q8IUD2 1116 aa13.2□□□□□ -0.3
LMCD1-205ENST00000454244 ZNF512BQ96KM6 892 aaPredicted RBP13.2□□□□□ -0.3
LMCD1-205ENST00000454244 ZBTB40Q9NUA8 1239 aa13.2□□□□□ -0.3
LMCD1-205ENST00000454244 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
LMCD1-205ENST00000454244 DDTLA6NHG4 134 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-205ENST00000454244 CYP2E1P05181 493 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-205ENST00000454244 CETPP11597 493 aa13.19□□□□□ -0.3
LMCD1-205ENST00000454244 PPATQ06203 517 aa13.19□□□□□ -0.3
LMCD1-205ENST00000454244 SNAPC2Q13487 334 aa13.19□□□□□ -0.3
LMCD1-205ENST00000454244 PKN2Q16513 984 aaKnown RBP13.19□□□□□ -0.3
LMCD1-205ENST00000454244 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
LMCD1-205ENST00000454244 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
LMCD1-205ENST00000454244 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-205ENST00000454244 AACSQ86V21 672 aa13.19□□□□□ -0.3
LMCD1-205ENST00000454244 RPAP2Q8IXW5 612 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-205ENST00000454244 FAM43AQ8N2R8 423 aa13.19□□□□□ -0.3
LMCD1-205ENST00000454244 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
LMCD1-205ENST00000454244 HMMRO75330 724 aa13.18□□□□□ -0.3
LMCD1-205ENST00000454244 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
LMCD1-205ENST00000454244 SLURP2P0DP57 97 aa13.18□□□□□ -0.3
LMCD1-205ENST00000454244 TAF1CQ15572 869 aaPredicted RBP13.18□□□□□ -0.3
LMCD1-205ENST00000454244 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
LMCD1-205ENST00000454244 NOL10Q9BSC4 688 aaKnown RBP13.18□□□□□ -0.3
LMCD1-205ENST00000454244 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
LMCD1-205ENST00000454244 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
LMCD1-205ENST00000454244 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
LMCD1-205ENST00000454244 PHF20L1A8MW92 1017 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 BTBD19C9JJ37 291 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 APBB1O00213 710 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
LMCD1-205ENST00000454244 PDE3AQ14432 1141 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 FBXO46Q6PJ61 603 aaPredicted RBP13.17□□□□□ -0.3
LMCD1-205ENST00000454244 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
LMCD1-205ENST00000454244 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 ZFYVE28Q9HCC9 887 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 AATFQ9NY61 560 aaKnown RBP eCLIP13.17□□□□□ -0.3
LMCD1-205ENST00000454244 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
LMCD1-205ENST00000454244 BAG3O95817 575 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 SP3Q02447 781 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 MAP3K10Q02779 954 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 ADGRA1Q86SQ6 560 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 CD99L2Q8TCZ2 262 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 SH3RF3Q8TEJ3 882 aaPredicted RBP13.16□□□□□ -0.3
LMCD1-205ENST00000454244 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 OSBPL5Q9H0X9 879 aaPredicted RBP13.16□□□□□ -0.3
LMCD1-205ENST00000454244 KCNH4Q9UQ05 1017 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 NDUFB9Q9Y6M9 179 aa13.16□□□□□ -0.3
LMCD1-205ENST00000454244 FAM196BA6NMK8 535 aa13.15□□□□□ -0.3
LMCD1-205ENST00000454244 IGSF3O75054 1194 aa13.15□□□□□ -0.3
LMCD1-205ENST00000454244 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
LMCD1-205ENST00000454244 PLCG2P16885 1265 aa13.15□□□□□ -0.3
LMCD1-205ENST00000454244 CYP7A1P22680 504 aa13.15□□□□□ -0.3
LMCD1-205ENST00000454244 PPP4CP60510 307 aa13.15□□□□□ -0.3
LMCD1-205ENST00000454244 OTOP1Q7RTM1 612 aa13.15□□□□□ -0.3
LMCD1-205ENST00000454244 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
LMCD1-205ENST00000454244 BCL11AQ9H165 835 aa13.15□□□□□ -0.3
LMCD1-205ENST00000454244 ZCCHC17Q9NP64 241 aaKnown RBP13.15□□□□□ -0.3
LMCD1-205ENST00000454244 PICK1Q9NRD5 415 aa13.15□□□□□ -0.3
LMCD1-205ENST00000454244 TBC1D12O60347 775 aa13.14□□□□□ -0.31
LMCD1-205ENST00000454244 PTPRAP18433 802 aa13.14□□□□□ -0.31
LMCD1-205ENST00000454244 RGS19P49795 217 aa13.14□□□□□ -0.31
LMCD1-205ENST00000454244 SOX10P56693 466 aa13.14□□□□□ -0.31
LMCD1-205ENST00000454244 ANTXR1Q9H6X2 564 aa13.14□□□□□ -0.31
LMCD1-205ENST00000454244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.14□□□□□ -0.31
LMCD1-205ENST00000454244 ZHX2Q9Y6X8 837 aa13.14□□□□□ -0.31
LMCD1-205ENST00000454244 CXCL11O14625 94 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 TLR2O60603 784 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
LMCD1-205ENST00000454244 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
LMCD1-205ENST00000454244 DYNLL1P63167 89 aaKnown RBP13.13□□□□□ -0.31
LMCD1-205ENST00000454244 CAP1Q01518 475 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 MOGSQ13724 837 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 CCDC84Q86UT8 332 aaPredicted RBP13.13□□□□□ -0.31
LMCD1-205ENST00000454244 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 TGFBRAP1Q8WUH2 860 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 EFCC1Q9HA90 598 aa13.13□□□□□ -0.31
LMCD1-205ENST00000454244 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
LMCD1-205ENST00000454244 LAMB1P07942 1786 aa13.12□□□□□ -0.31
LMCD1-205ENST00000454244 COL2A1P02458 1487 aaPredicted RBP13.12□□□□□ -0.31
LMCD1-205ENST00000454244 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
LMCD1-205ENST00000454244 PDHXO00330 501 aa13.12□□□□□ -0.31
LMCD1-205ENST00000454244 MLLT1Q03111 559 aaPredicted RBP13.12□□□□□ -0.31
LMCD1-205ENST00000454244 MAP3K12Q12852 859 aa13.12□□□□□ -0.31
LMCD1-205ENST00000454244 MIGA1Q8NAN2 632 aa13.12□□□□□ -0.31
LMCD1-205ENST00000454244 FLT1P17948 1338 aa13.12□□□□□ -0.31
LMCD1-205ENST00000454244 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
LMCD1-205ENST00000454244 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
LMCD1-205ENST00000454244 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
LMCD1-205ENST00000454244 CPA4Q9UI42 421 aa13.11□□□□□ -0.31
LMCD1-205ENST00000454244 HERC5Q9UII4 1024 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms