RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 BCS1LQ9Y276 419 aa7.12□□□□□ -1.27
SDC4P-201ENST00000453285 GREB1LQ9C091 1923 aaPredicted RBP7.11□□□□□ -1.27
SDC4P-201ENST00000453285 NEDD4P46934 1319 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 WDR19Q8NEZ3 1342 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 BAZ2BQ9UIF8 2168 aaKnown RBP7.11□□□□□ -1.27
SDC4P-201ENST00000453285 CYP2D7A0A087X1C5 515 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 USP17L12C9JPN9 530 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 USP17L21D6R901 530 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 F8W031 263 aaPredicted RBP7.11□□□□□ -1.27
SDC4P-201ENST00000453285 PSMD14O00487 310 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 CYP2D6P10635 497 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 CRKP46108 304 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 SCNN1DP51172 638 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 EVCP57679 992 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 ME3Q16798 604 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 AKNAD1Q5T1N1 836 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 APOBEC3HQ6NTF7 200 aaKnown RBP7.11□□□□□ -1.27
SDC4P-201ENST00000453285 RSBN1LQ6PCB5 846 aaPredicted RBP7.11□□□□□ -1.27
SDC4P-201ENST00000453285 NOL8Q76FK4 1167 aaKnown RBP7.11□□□□□ -1.27
SDC4P-201ENST00000453285 CHST3Q7LGC8 479 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 CERS3Q8IU89 383 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 ZSCAN31Q96LW9 406 aaPredicted RBP7.11□□□□□ -1.27
SDC4P-201ENST00000453285 ZDHHC15Q96MV8 337 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 LRRC2Q9BYS8 371 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 FHDC1Q9C0D6 1143 aaPredicted RBP7.11□□□□□ -1.27
SDC4P-201ENST00000453285 TAOK3Q9H2K8 898 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 TPCN1Q9ULQ1 816 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 ZNRF3Q9ULT6 936 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 PCDHAC2Q9Y5I4 1007 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 MYH15Q9Y2K3 1946 aa7.11□□□□□ -1.27
SDC4P-201ENST00000453285 GOLGB1Q14789 3259 aaKnown RBP7.1□□□□□ -1.27
SDC4P-201ENST00000453285 MINDY4BA8MYZ0 360 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 B4E1Z4 1266 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 PRC1O43663 620 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 WDHD1O75717 1129 aaPredicted RBP7.1□□□□□ -1.27
SDC4P-201ENST00000453285 RAD17O75943 681 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 USP17L8P0C7I0 530 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 PLCG2P16885 1265 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 MCM5P33992 734 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 USP5P45974 858 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 RASSF7Q02833 373 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 CXCL9Q07325 125 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 ANKRD1Q15327 319 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 C12orf60Q5U649 245 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 CDC42EP5Q6NZY7 148 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 MFSD6Q6ZSS7 791 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 KIAA0825Q8IV33 1275 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 NIM1KQ8IY84 436 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 TEX11Q8IYF3 940 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 IGDCC4Q8TDY8 1250 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 TGFBRAP1Q8WUH2 860 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 TEKT1Q969V4 418 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 INTS4Q96HW7 963 aaKnown RBP7.1□□□□□ -1.27
SDC4P-201ENST00000453285 NOL10Q9BSC4 688 aaKnown RBP7.1□□□□□ -1.27
SDC4P-201ENST00000453285 SYT17Q9BSW7 474 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 SLKQ9H2G2 1235 aaPredicted RBP7.1□□□□□ -1.27
SDC4P-201ENST00000453285 GPHNQ9NQX3 736 aaPredicted RBP7.1□□□□□ -1.27
SDC4P-201ENST00000453285 FOXD4L1Q9NU39 408 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 ZSWIM5Q9P217 1185 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 SERPINA10Q9UK55 444 aa7.1□□□□□ -1.27
SDC4P-201ENST00000453285 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.1□□□□□ -1.27
SDC4P-201ENST00000453285 ROBO3Q96MS0 1386 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 FLT1P17948 1338 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 MYO3BQ8WXR4 1341 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 ORC4O43929 436 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 PLCD1P51178 756 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 APOBRQ0VD83 1088 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 TRDNQ13061 729 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 RALYLQ86SE5 291 aaKnown RBP7.09□□□□□ -1.27
SDC4P-201ENST00000453285 MAPKAPK5Q8IW41 473 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 BRF1Q92994 677 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 KRT23Q9C075 422 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 RNF41Q9H4P4 317 aaPredicted RBP7.09□□□□□ -1.27
SDC4P-201ENST00000453285 CNNM2Q9H8M5 875 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 DDX4Q9NQI0 724 aaKnown RBP7.09□□□□□ -1.27
SDC4P-201ENST00000453285 SH2B1Q9NRF2 756 aaPredicted RBP7.09□□□□□ -1.27
SDC4P-201ENST00000453285 USP40Q9NVE5 1235 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 MCM9Q9NXL9 1143 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 ARPP21Q9UBL0 812 aaPredicted RBP7.09□□□□□ -1.27
SDC4P-201ENST00000453285 BRPF3Q9ULD4 1205 aa7.09□□□□□ -1.27
SDC4P-201ENST00000453285 ZBTB12Q9Y330 459 aaPredicted RBP7.09□□□□□ -1.27
SDC4P-201ENST00000453285 FZD9O00144 591 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 SH2B2O14492 632 aaPredicted RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 PFKFB2O60825 505 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 KDM4AO75164 1064 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 NPM3O75607 178 aaKnown RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 PCP11498 1178 aaKnown RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 PDIA3P30101 505 aaKnown RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 CFAP100Q494V2 611 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 CIAPIN1Q6FI81 312 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 CCDC83Q8IWF9 413 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 STK11IPQ8N1F8 1099 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 NECAB1Q8N987 351 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 AGBL3Q8NEM8 1001 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 DYNLL2Q96FJ2 89 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 ZNF274Q96GC6 653 aaPredicted RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 ZBED3Q96IU2 234 aaPredicted RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 TMEM87BQ96K49 555 aa7.08□□□□□ -1.28
SDC4P-201ENST00000453285 PRMT6Q96LA8 375 aaPredicted RBP7.08□□□□□ -1.28
SDC4P-201ENST00000453285 MTA3Q9BTC8 594 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms