RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 CSRNP1Q96S65 589 aa18.81■□□□□ 0.6
VPS8-213ENST00000453056 ZNF341Q9BYN7 854 aa18.81■□□□□ 0.6
VPS8-213ENST00000453056 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.81■□□□□ 0.6
VPS8-213ENST00000453056 COL2A1P02458 1487 aaPredicted RBP18.81■□□□□ 0.6
VPS8-213ENST00000453056 ERC2O15083 957 aa18.8■□□□□ 0.6
VPS8-213ENST00000453056 CA12O43570 354 aa18.8■□□□□ 0.6
VPS8-213ENST00000453056 SH3RF3Q8TEJ3 882 aaPredicted RBP18.8■□□□□ 0.6
VPS8-213ENST00000453056 WRNIP1Q96S55 665 aa18.8■□□□□ 0.6
VPS8-213ENST00000453056 TTC41PQ6P2S7 1318 aa18.79■□□□□ 0.6
VPS8-213ENST00000453056 PDE6AP16499 860 aa18.79■□□□□ 0.6
VPS8-213ENST00000453056 CTCFP49711 727 aaPredicted RBP18.79■□□□□ 0.6
VPS8-213ENST00000453056 MAP3K9P80192 1104 aa18.79■□□□□ 0.6
VPS8-213ENST00000453056 KIF23Q02241 960 aaPredicted RBP18.79■□□□□ 0.6
VPS8-213ENST00000453056 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
VPS8-213ENST00000453056 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
VPS8-213ENST00000453056 ADGRA1Q86SQ6 560 aa18.79■□□□□ 0.6
VPS8-213ENST00000453056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.79■□□□□ 0.6
VPS8-213ENST00000453056 CLMNQ96JQ2 1002 aa18.79■□□□□ 0.6
VPS8-213ENST00000453056 DDX4Q9NQI0 724 aaKnown RBP18.79■□□□□ 0.6
VPS8-213ENST00000453056 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
VPS8-213ENST00000453056 ATRNL1Q5VV63 1379 aa18.79■□□□□ 0.6
VPS8-213ENST00000453056 ZBTB48P10074 688 aaPredicted RBP18.78■□□□□ 0.6
VPS8-213ENST00000453056 SPRYD7Q5W111 196 aa18.78■□□□□ 0.6
VPS8-213ENST00000453056 WNK4Q96J92 1243 aa18.78■□□□□ 0.6
VPS8-213ENST00000453056 MYH1P12882 1939 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 MX1P20591 662 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 SREBF2Q12772 1141 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
VPS8-213ENST00000453056 VGLL4Q14135 290 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 MIGA2Q7L4E1 593 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 ZFPM1Q8IX07 1006 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 MIGA1Q8NAN2 632 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 EDC3Q96F86 508 aaKnown RBP18.77■□□□□ 0.6
VPS8-213ENST00000453056 ZIC5Q96T25 663 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 OSBPL5Q9H0X9 879 aaPredicted RBP18.77■□□□□ 0.6
VPS8-213ENST00000453056 ELP3Q9H9T3 547 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 LAMB1P07942 1786 aa18.77■□□□□ 0.6
VPS8-213ENST00000453056 FOXN1O15353 648 aa18.76■□□□□ 0.59
VPS8-213ENST00000453056 GLRX3O76003 335 aaKnown RBP18.76■□□□□ 0.59
VPS8-213ENST00000453056 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
VPS8-213ENST00000453056 ZSCAN25Q6NSZ9 544 aa18.76■□□□□ 0.59
VPS8-213ENST00000453056 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.76■□□□□ 0.59
VPS8-213ENST00000453056 TGFBRAP1Q8WUH2 860 aa18.76■□□□□ 0.59
VPS8-213ENST00000453056 FLT1P17948 1338 aa18.75■□□□□ 0.59
VPS8-213ENST00000453056 ZNF532Q9HCE3 1301 aa18.75■□□□□ 0.59
VPS8-213ENST00000453056 NAV1Q8NEY1 1877 aa18.75■□□□□ 0.59
VPS8-213ENST00000453056 MAGEB6P1A0A0J9YX57 407 aa18.75■□□□□ 0.59
VPS8-213ENST00000453056 MANSC4A6NHS7 340 aaPredicted RBP18.75■□□□□ 0.59
VPS8-213ENST00000453056 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
VPS8-213ENST00000453056 TSHZ3Q63HK5 1081 aa18.75■□□□□ 0.59
VPS8-213ENST00000453056 MAPKAPK5Q8IW41 473 aa18.75■□□□□ 0.59
VPS8-213ENST00000453056 SMC5Q8IY18 1101 aa18.75■□□□□ 0.59
VPS8-213ENST00000453056 DHX36Q9H2U1 1008 aaKnown RBP18.75■□□□□ 0.59
VPS8-213ENST00000453056 DDTLA6NHG4 134 aaPredicted RBP18.74■□□□□ 0.59
VPS8-213ENST00000453056 USP5P45974 858 aa18.74■□□□□ 0.59
VPS8-213ENST00000453056 LRRFIP1Q32MZ4 808 aaKnown RBP18.74■□□□□ 0.59
VPS8-213ENST00000453056 SH3BP5LQ7L8J4 393 aa18.74■□□□□ 0.59
VPS8-213ENST00000453056 OPTNQ96CV9 577 aa18.74■□□□□ 0.59
VPS8-213ENST00000453056 CRNKL1Q9BZJ0 848 aaKnown RBP18.74■□□□□ 0.59
VPS8-213ENST00000453056 SAGE1Q9NXZ1 904 aa18.74■□□□□ 0.59
VPS8-213ENST00000453056 DOCK1Q14185 1865 aa18.73■□□□□ 0.59
VPS8-213ENST00000453056 SPDYE5A6NIY4 337 aa18.73■□□□□ 0.59
VPS8-213ENST00000453056 HLA-DOAP06340 250 aa18.73■□□□□ 0.59
VPS8-213ENST00000453056 ADD2P35612 726 aa18.73■□□□□ 0.59
VPS8-213ENST00000453056 ERO1BQ86YB8 467 aa18.73■□□□□ 0.59
VPS8-213ENST00000453056 OTUD7AQ8TE49 926 aaPredicted RBP18.73■□□□□ 0.59
VPS8-213ENST00000453056 TRIM34Q9BYJ4 488 aa18.73■□□□□ 0.59
VPS8-213ENST00000453056 ZNF112Q9UJU3 913 aa18.73■□□□□ 0.59
VPS8-213ENST00000453056 SNCAIPQ9Y6H5 919 aa18.73■□□□□ 0.59
VPS8-213ENST00000453056 TCRBV5S4A2TA0A5A2 114 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 TBC1D12O60347 775 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 HSPA8P11142 646 aaKnown RBP18.72■□□□□ 0.59
VPS8-213ENST00000453056 INPP5BP32019 993 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 INHBEP58166 350 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 UBE3CQ15386 1083 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 NOL9Q5SY16 702 aaKnown RBP18.72■□□□□ 0.59
VPS8-213ENST00000453056 KBTBD3Q8NAB2 608 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 ZKSCAN4Q969J2 545 aaPredicted RBP18.72■□□□□ 0.59
VPS8-213ENST00000453056 OTUD5Q96G74 571 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
VPS8-213ENST00000453056 LNPKQ9C0E8 428 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 PICK1Q9NRD5 415 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 PI4KBQ9UBF8 816 aa18.72■□□□□ 0.59
VPS8-213ENST00000453056 HERC5Q9UII4 1024 aaKnown RBP18.72■□□□□ 0.59
VPS8-213ENST00000453056 PI4K2BQ8TCG2 481 aa18.71■□□□□ 0.59
VPS8-213ENST00000453056 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.71■□□□□ 0.59
VPS8-213ENST00000453056 PRDM10Q9NQV6 1147 aa18.71■□□□□ 0.59
VPS8-213ENST00000453056 SIPA1L1O43166 1804 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 ATAD5Q96QE3 1844 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 ZFYP08048 801 aaPredicted RBP18.7■□□□□ 0.58
VPS8-213ENST00000453056 GJA5P36382 358 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 TM4SF4P48230 202 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 GTF2A2P52657 109 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 LBX1P52954 281 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 MAP3K10Q02779 954 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 PPIL2Q13356 520 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 DDX60LQ5H9U9 1706 aaKnown RBP18.7■□□□□ 0.58
VPS8-213ENST00000453056 OTUD7BQ6GQQ9 843 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 B4GALNT3Q6L9W6 998 aa18.7■□□□□ 0.58
VPS8-213ENST00000453056 CRACR2BQ8N4Y2 399 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms