RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 NR5A1Q13285 461 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 ELF2Q15723 593 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 RPGRQ92834 1020 aaKnown RBP12.83□□□□□ -0.36
DDR1-239ENST00000452441 VPS54Q9P1Q0 977 aa12.83□□□□□ -0.36
DDR1-239ENST00000452441 PFKFB2O60825 505 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 FAM47AQ5JRC9 791 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 TDRD7Q8NHU6 1098 aaKnown RBP12.82□□□□□ -0.36
DDR1-239ENST00000452441 CCDC34Q96HJ3 373 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
DDR1-239ENST00000452441 SAP30BPQ9UHR5 308 aaKnown RBP12.82□□□□□ -0.36
DDR1-239ENST00000452441 ZNF609O15014 1411 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 MED23Q9ULK4 1368 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 PFKFB1P16118 471 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 RFX5P48382 616 aaPredicted RBP12.82□□□□□ -0.36
DDR1-239ENST00000452441 ADKP55263 362 aaKnown RBP12.82□□□□□ -0.36
DDR1-239ENST00000452441 GNG11P61952 73 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 RTN1Q16799 776 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 LPIN2Q92539 896 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 AATFQ9NY61 560 aaKnown RBP eCLIP12.82□□□□□ -0.36
DDR1-239ENST00000452441 ANGEL1Q9UNK9 670 aaKnown RBP12.82□□□□□ -0.36
DDR1-239ENST00000452441 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
DDR1-239ENST00000452441 SMYD4Q8IYR2 804 aaPredicted RBP12.82□□□□□ -0.36
DDR1-239ENST00000452441 NCAPD2Q15021 1401 aa12.82□□□□□ -0.36
DDR1-239ENST00000452441 ZSCAN20P17040 1043 aaPredicted RBP12.81□□□□□ -0.36
DDR1-239ENST00000452441 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 IQCA1Q86XH1 822 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 PLA2G4DQ86XP0 818 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
DDR1-239ENST00000452441 UBXN4Q92575 508 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 DESI2Q9BSY9 194 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 HOOK1Q9UJC3 728 aaKnown RBP12.81□□□□□ -0.36
DDR1-239ENST00000452441 ZNF215Q9UL58 517 aaPredicted RBP12.81□□□□□ -0.36
DDR1-239ENST00000452441 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
DDR1-239ENST00000452441 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 CTAGE5O15320 804 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 SSBP05455 408 aaKnown RBP eCLIP12.81□□□□□ -0.36
DDR1-239ENST00000452441 KCNG4Q8TDN1 519 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 ZHX3Q9H4I2 956 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 FOXN1O15353 648 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 CCT6AP40227 531 aaKnown RBP12.81□□□□□ -0.36
DDR1-239ENST00000452441 DSCC1Q9BVC3 393 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 DNAJC5Q9H3Z4 198 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 BRMS1Q9HCU9 246 aa12.81□□□□□ -0.36
DDR1-239ENST00000452441 C5P01031 1676 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 SMTNL1A8MU46 457 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 NLRP5P59047 1200 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 NCBP1Q09161 790 aaKnown RBP12.8□□□□□ -0.36
DDR1-239ENST00000452441 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
DDR1-239ENST00000452441 RTCBQ9Y3I0 505 aaKnown RBP12.8□□□□□ -0.36
DDR1-239ENST00000452441 CTDNEP1O95476 244 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 NAP1L1P55209 391 aaKnown RBP12.8□□□□□ -0.36
DDR1-239ENST00000452441 CHRNDQ07001 517 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 FKBP15Q5T1M5 1219 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 MCM9Q9NXL9 1143 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 CARMIL3Q8ND23 1372 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 WTIPA6NIX2 430 aaPredicted RBP12.8□□□□□ -0.36
DDR1-239ENST00000452441 MCM7P33993 719 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 BLZF1Q9H2G9 400 aa12.8□□□□□ -0.36
DDR1-239ENST00000452441 DMTNQ08495 405 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.79□□□□□ -0.36
DDR1-239ENST00000452441 PPFIBP1Q86W92 1011 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 FBXO18Q8NFZ0 1043 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 EPC1Q9H2F5 836 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 UTYO14607 1347 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
DDR1-239ENST00000452441 ERCC6LQ2NKX8 1250 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 ERFEQ4G0M1 354 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 CYB5R4Q7L1T6 521 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 LRRC8AQ8IWT6 810 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 CTCFLQ8NI51 663 aaPredicted RBP12.79□□□□□ -0.36
DDR1-239ENST00000452441 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 USP21Q9UK80 565 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 FANCCQ00597 558 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
DDR1-239ENST00000452441 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 TBC1D10CQ8IV04 446 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 SMARCE1Q969G3 411 aa12.79□□□□□ -0.36
DDR1-239ENST00000452441 SLIT3O75094 1523 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 SMIM22K7EJ46 135 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
DDR1-239ENST00000452441 ZSWIM5Q9P217 1185 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 CGNQ9P2M7 1197 aaKnown RBP12.78□□□□□ -0.36
DDR1-239ENST00000452441 PUF60Q9UHX1 559 aaKnown RBP12.78□□□□□ -0.36
DDR1-239ENST00000452441 KCNH3Q9ULD8 1083 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 TPTE2Q6XPS3 522 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 CATIPQ7Z7H3 387 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 MST1RQ04912 1400 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 TPM1P09493 284 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
DDR1-239ENST00000452441 FAM193AP78312 1265 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
DDR1-239ENST00000452441 IFNL3Q8IZI9 196 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 ANKRD7Q92527 254 aa12.78□□□□□ -0.36
DDR1-239ENST00000452441 ISCA1Q9BUE6 129 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms