RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 FAM43AQ8N2R8 423 aa15.34■□□□□ 0.05
CPSF4-208ENST00000452047 FOCADQ5VW36 1801 aa15.33■□□□□ 0.05
CPSF4-208ENST00000452047 DOCK1Q14185 1865 aa15.33■□□□□ 0.05
CPSF4-208ENST00000452047 DDTLA6NHG4 134 aaPredicted RBP15.33■□□□□ 0.04
CPSF4-208ENST00000452047 PHF20L1A8MW92 1017 aa15.33■□□□□ 0.04
CPSF4-208ENST00000452047 GSTO1P78417 241 aa15.33■□□□□ 0.04
CPSF4-208ENST00000452047 MAP3K10Q02779 954 aa15.33■□□□□ 0.04
CPSF4-208ENST00000452047 PPATQ06203 517 aa15.33■□□□□ 0.04
CPSF4-208ENST00000452047 SNAPC2Q13487 334 aa15.33■□□□□ 0.04
CPSF4-208ENST00000452047 TTC39AQ5SRH9 613 aa15.33■□□□□ 0.04
CPSF4-208ENST00000452047 ZNF512BQ96KM6 892 aaPredicted RBP15.33■□□□□ 0.04
CPSF4-208ENST00000452047 TLR7Q9NYK1 1049 aaKnown RBP15.33■□□□□ 0.04
CPSF4-208ENST00000452047 DBNLQ9UJU6 430 aaKnown RBP15.33■□□□□ 0.04
CPSF4-208ENST00000452047 PHIPQ8WWQ0 1821 aa15.33■□□□□ 0.04
CPSF4-208ENST00000452047 MKI67P46013 3256 aaKnown RBP15.33■□□□□ 0.04
CPSF4-208ENST00000452047 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
CPSF4-208ENST00000452047 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
CPSF4-208ENST00000452047 CETPP11597 493 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 MS4A1P11836 297 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 CAP1Q01518 475 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 PICALMQ13492 652 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-208ENST00000452047 CCDC158Q5M9N0 1113 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 EAF2Q96CJ1 260 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-208ENST00000452047 ZCCHC17Q9NP64 241 aaKnown RBP15.32■□□□□ 0.04
CPSF4-208ENST00000452047 SNRKQ9NRH2 765 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 RAI14Q9P0K7 980 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 KCNH4Q9UQ05 1017 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 PTPRFP10586 1907 aa15.32■□□□□ 0.04
CPSF4-208ENST00000452047 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
CPSF4-208ENST00000452047 MAP4K4O95819 1239 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-208ENST00000452047 CYP2E1P05181 493 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-208ENST00000452047 LDHCP07864 332 aa15.31■□□□□ 0.04
CPSF4-208ENST00000452047 OTOP1Q7RTM1 612 aa15.31■□□□□ 0.04
CPSF4-208ENST00000452047 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-208ENST00000452047 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
CPSF4-208ENST00000452047 LRP2BPQ9P2M1 347 aa15.31■□□□□ 0.04
CPSF4-208ENST00000452047 RCAN3Q9UKA8 241 aa15.31■□□□□ 0.04
CPSF4-208ENST00000452047 EXOC6BQ9Y2D4 811 aa15.31■□□□□ 0.04
CPSF4-208ENST00000452047 SIPA1L1O43166 1804 aa15.31■□□□□ 0.04
CPSF4-208ENST00000452047 ZSWIM8A7E2V4 1837 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 SLURP2P0DP57 97 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 SOX10P56693 466 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 SP3Q02447 781 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 MLLT1Q03111 559 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-208ENST00000452047 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-208ENST00000452047 CD99L2Q8TCZ2 262 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 ATAD5Q96QE3 1844 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 CCDC8Q9H0W5 538 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-208ENST00000452047 ZFYVE28Q9HCC9 887 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 ZBTB40Q9NUA8 1239 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 COG6Q9Y2V7 657 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 TRIM17Q9Y577 477 aa15.3■□□□□ 0.04
CPSF4-208ENST00000452047 ZAP70P43403 619 aa15.29■□□□□ 0.04
CPSF4-208ENST00000452047 MOGSQ13724 837 aa15.29■□□□□ 0.04
CPSF4-208ENST00000452047 ERC1Q8IUD2 1116 aa15.29■□□□□ 0.04
CPSF4-208ENST00000452047 SCYL3Q8IZE3 742 aa15.29■□□□□ 0.04
CPSF4-208ENST00000452047 DDX19BQ9UMR2 479 aa15.29■□□□□ 0.04
CPSF4-208ENST00000452047 TLR2O60603 784 aa15.28■□□□□ 0.04
CPSF4-208ENST00000452047 IGSF3O75054 1194 aa15.28■□□□□ 0.04
CPSF4-208ENST00000452047 NAA16Q6N069 864 aaPredicted RBP15.28■□□□□ 0.04
CPSF4-208ENST00000452047 ADGRA1Q86SQ6 560 aa15.28■□□□□ 0.04
CPSF4-208ENST00000452047 SIRT2Q8IXJ6 389 aa15.28■□□□□ 0.04
CPSF4-208ENST00000452047 OSBPL5Q9H0X9 879 aaPredicted RBP15.28■□□□□ 0.04
CPSF4-208ENST00000452047 PIH1D3Q9NQM4 214 aaKnown RBP15.28■□□□□ 0.04
CPSF4-208ENST00000452047 TBC1D12O60347 775 aa15.27■□□□□ 0.04
CPSF4-208ENST00000452047 PTPRAP18433 802 aa15.27■□□□□ 0.04
CPSF4-208ENST00000452047 PPP4CP60510 307 aa15.27■□□□□ 0.04
CPSF4-208ENST00000452047 ANKRD23Q86SG2 305 aa15.27■□□□□ 0.04
CPSF4-208ENST00000452047 RPAP2Q8IXW5 612 aaPredicted RBP15.27■□□□□ 0.04
CPSF4-208ENST00000452047 TEX11Q8IYF3 940 aa15.27■□□□□ 0.04
CPSF4-208ENST00000452047 SH3RF3Q8TEJ3 882 aaPredicted RBP15.27■□□□□ 0.04
CPSF4-208ENST00000452047 EFCC1Q9HA90 598 aa15.27■□□□□ 0.04
CPSF4-208ENST00000452047 AATFQ9NY61 560 aaKnown RBP eCLIP15.27■□□□□ 0.04
CPSF4-208ENST00000452047 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
CPSF4-208ENST00000452047 ADGRA2Q96PE1 1338 aa15.26■□□□□ 0.03
CPSF4-208ENST00000452047 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
CPSF4-208ENST00000452047 CXCL11O14625 94 aa15.26■□□□□ 0.03
CPSF4-208ENST00000452047 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
CPSF4-208ENST00000452047 HSP90AB4PQ58FF6 505 aa15.26■□□□□ 0.03
CPSF4-208ENST00000452047 AACSQ86V21 672 aa15.26■□□□□ 0.03
CPSF4-208ENST00000452047 RHPN1Q8TCX5 695 aa15.26■□□□□ 0.03
CPSF4-208ENST00000452047 PICK1Q9NRD5 415 aa15.26■□□□□ 0.03
CPSF4-208ENST00000452047 PTPN22Q9Y2R2 807 aa15.26■□□□□ 0.03
CPSF4-208ENST00000452047 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
CPSF4-208ENST00000452047 PDHXO00330 501 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 BAG3O95817 575 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 PLCG2P16885 1265 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 C20orf194Q5TEA3 1177 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
CPSF4-208ENST00000452047 NOL10Q9BSC4 688 aaKnown RBP15.25■□□□□ 0.03
CPSF4-208ENST00000452047 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
CPSF4-208ENST00000452047 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 NDUFB9Q9Y6M9 179 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 ZHX2Q9Y6X8 837 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 LOC285556D6RIA3 1793 aa15.25■□□□□ 0.03
CPSF4-208ENST00000452047 FLT1P17948 1338 aa15.24■□□□□ 0.03
CPSF4-208ENST00000452047 HMMRO75330 724 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms