RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 STRBPQ96SI9 672 aaKnown RBP28.94■■■□□ 2.22
CPSF4-207ENST00000451876 FLT1P17948 1338 aa28.93■■■□□ 2.22
CPSF4-207ENST00000451876 TNNI2P48788 182 aa28.93■■■□□ 2.22
CPSF4-207ENST00000451876 MAPKAPK5Q8IW41 473 aa28.93■■■□□ 2.22
CPSF4-207ENST00000451876 HELLSQ9NRZ9 838 aa28.93■■■□□ 2.22
CPSF4-207ENST00000451876 HIP1O00291 1037 aa28.92■■■□□ 2.22
CPSF4-207ENST00000451876 CHMLP26374 656 aa28.92■■■□□ 2.22
CPSF4-207ENST00000451876 ZNF589Q86UQ0 364 aaPredicted RBP28.92■■■□□ 2.22
CPSF4-207ENST00000451876 TEPSINQ96N21 525 aa28.92■■■□□ 2.22
CPSF4-207ENST00000451876 CRNKL1Q9BZJ0 848 aaKnown RBP28.92■■■□□ 2.22
CPSF4-207ENST00000451876 IL25Q9H293 177 aa28.92■■■□□ 2.22
CPSF4-207ENST00000451876 SIPA1L1O43166 1804 aa28.92■■■□□ 2.22
CPSF4-207ENST00000451876 ENTPD3O75355 529 aa28.91■■■□□ 2.22
CPSF4-207ENST00000451876 FAM151AQ8WW52 585 aa28.91■■■□□ 2.22
CPSF4-207ENST00000451876 SSC5DA1L4H1 1573 aa28.91■■■□□ 2.22
CPSF4-207ENST00000451876 USP5P45974 858 aa28.91■■■□□ 2.22
CPSF4-207ENST00000451876 MCMDC2Q4G0Z9 681 aa28.91■■■□□ 2.22
CPSF4-207ENST00000451876 CDCA5Q96FF9 252 aa28.91■■■□□ 2.22
CPSF4-207ENST00000451876 OSBPL5Q9H0X9 879 aaPredicted RBP28.91■■■□□ 2.22
CPSF4-207ENST00000451876 PPP2R3BQ9Y5P8 575 aa28.91■■■□□ 2.22
CPSF4-207ENST00000451876 SLC4A4Q9Y6R1 1079 aa28.91■■■□□ 2.22
CPSF4-207ENST00000451876 PASKQ96RG2 1323 aa28.9■■■□□ 2.22
CPSF4-207ENST00000451876 RPAP1Q9BWH6 1393 aaPredicted RBP28.9■■■□□ 2.22
CPSF4-207ENST00000451876 NPM3O75607 178 aaKnown RBP28.9■■■□□ 2.22
CPSF4-207ENST00000451876 FSTL1Q12841 308 aa28.9■■■□□ 2.22
CPSF4-207ENST00000451876 SH3BP5LQ7L8J4 393 aa28.9■■■□□ 2.22
CPSF4-207ENST00000451876 MKRN1Q9UHC7 482 aaKnown RBP28.9■■■□□ 2.22
CPSF4-207ENST00000451876 NBPF12Q5TAG4 269 aaPredicted RBP28.88■■■□□ 2.21
CPSF4-207ENST00000451876 DCP1AQ9NPI6 582 aaPredicted RBP28.88■■■□□ 2.21
CPSF4-207ENST00000451876 COL2A1P02458 1487 aaPredicted RBP28.88■■■□□ 2.21
CPSF4-207ENST00000451876 DDTLA6NHG4 134 aaPredicted RBP28.87■■■□□ 2.21
CPSF4-207ENST00000451876 ATRNL1Q5VV63 1379 aa28.87■■■□□ 2.21
CPSF4-207ENST00000451876 FOXP2O15409 715 aa28.87■■■□□ 2.21
CPSF4-207ENST00000451876 VPS53Q5VIR6 699 aa28.87■■■□□ 2.21
CPSF4-207ENST00000451876 SAP30BPQ9UHR5 308 aaKnown RBP28.87■■■□□ 2.21
CPSF4-207ENST00000451876 CCDC171Q6TFL3 1326 aa28.86■■■□□ 2.21
CPSF4-207ENST00000451876 LAMB1P07942 1786 aa28.86■■■□□ 2.21
CPSF4-207ENST00000451876 GSG1L2A8MUP6 293 aa28.86■■■□□ 2.21
CPSF4-207ENST00000451876 SLC4A8Q2Y0W8 1093 aa28.86■■■□□ 2.21
CPSF4-207ENST00000451876 ZNF408Q9H9D4 720 aa28.86■■■□□ 2.21
CPSF4-207ENST00000451876 EPB41L4AQ9HCS5 686 aaPredicted RBP28.86■■■□□ 2.21
CPSF4-207ENST00000451876 ZSCAN29Q8IWY8 852 aaPredicted RBP28.85■■■□□ 2.21
CPSF4-207ENST00000451876 PALD1Q9ULE6 856 aa28.85■■■□□ 2.21
CPSF4-207ENST00000451876 CDC45O75419 566 aa28.84■■■□□ 2.21
CPSF4-207ENST00000451876 GNAT2P19087 354 aa28.84■■■□□ 2.21
CPSF4-207ENST00000451876 ATP8A2Q9NTI2 1148 aa28.84■■■□□ 2.21
CPSF4-207ENST00000451876 CSRNP1Q96S65 589 aa28.83■■■□□ 2.21
CPSF4-207ENST00000451876 FZD1Q9UP38 647 aa28.83■■■□□ 2.21
CPSF4-207ENST00000451876 SLURP2P0DP57 97 aa28.83■■■□□ 2.21
CPSF4-207ENST00000451876 RAD50Q92878 1312 aa28.83■■■□□ 2.21
CPSF4-207ENST00000451876 OTOFQ9HC10 1997 aa28.82■■■□□ 2.2
CPSF4-207ENST00000451876 SGSM2O43147 1006 aa28.82■■■□□ 2.2
CPSF4-207ENST00000451876 CELF2O95319 508 aaKnown RBP28.82■■■□□ 2.2
CPSF4-207ENST00000451876 EVX2Q03828 476 aa28.82■■■□□ 2.2
CPSF4-207ENST00000451876 CST9Q5W186 159 aa28.82■■■□□ 2.2
CPSF4-207ENST00000451876 MCM9Q9NXL9 1143 aa28.82■■■□□ 2.2
CPSF4-207ENST00000451876 PAPPA2Q9BXP8 1791 aa28.82■■■□□ 2.2
CPSF4-207ENST00000451876 PATL2C9JE40 543 aaKnown RBP28.81■■■□□ 2.2
CPSF4-207ENST00000451876 APPP05067 770 aa28.81■■■□□ 2.2
CPSF4-207ENST00000451876 RUFY2Q8WXA3 655 aa28.81■■■□□ 2.2
CPSF4-207ENST00000451876 HSPD1P10809 573 aaKnown RBP28.8■■■□□ 2.2
CPSF4-207ENST00000451876 DHX36Q9H2U1 1008 aaKnown RBP28.8■■■□□ 2.2
CPSF4-207ENST00000451876 SUPT20HL1Q3ZLR7 823 aa28.8■■■□□ 2.2
CPSF4-207ENST00000451876 IFNL3Q8IZI9 196 aa28.8■■■□□ 2.2
CPSF4-207ENST00000451876 CYP2D7A0A087X1C5 515 aa28.79■■■□□ 2.2
CPSF4-207ENST00000451876 SMIM22K7EJ46 135 aa28.79■■■□□ 2.2
CPSF4-207ENST00000451876 CYP2D6P10635 497 aa28.79■■■□□ 2.2
CPSF4-207ENST00000451876 MFAP1P55081 439 aaKnown RBP28.79■■■□□ 2.2
CPSF4-207ENST00000451876 PRKG1Q13976 671 aa28.79■■■□□ 2.2
CPSF4-207ENST00000451876 MIGA2Q7L4E1 593 aa28.79■■■□□ 2.2
CPSF4-207ENST00000451876 ESYT1Q9BSJ8 1104 aa28.79■■■□□ 2.2
CPSF4-207ENST00000451876 USP17L12C9JPN9 530 aa28.78■■■□□ 2.2
CPSF4-207ENST00000451876 USP17L21D6R901 530 aa28.78■■■□□ 2.2
CPSF4-207ENST00000451876 NF2P35240 595 aa28.78■■■□□ 2.2
CPSF4-207ENST00000451876 PLCD1P51178 756 aa28.78■■■□□ 2.2
CPSF4-207ENST00000451876 GIMAP6Q6P9H5 292 aa28.78■■■□□ 2.2
CPSF4-207ENST00000451876 CTR9Q6PD62 1173 aa28.78■■■□□ 2.2
CPSF4-207ENST00000451876 DDRGK1Q96HY6 314 aa28.78■■■□□ 2.2
CPSF4-207ENST00000451876 FAM196BA6NMK8 535 aa28.77■■■□□ 2.2
CPSF4-207ENST00000451876 TDO2P48775 406 aa28.77■■■□□ 2.2
CPSF4-207ENST00000451876 MOB2Q70IA6 237 aa28.77■■■□□ 2.2
CPSF4-207ENST00000451876 MYH8P13535 1937 aa28.77■■■□□ 2.2
CPSF4-207ENST00000451876 LAMA4Q16363 1823 aa28.77■■■□□ 2.2
CPSF4-207ENST00000451876 POLR3DP05423 398 aaPredicted RBP28.76■■■□□ 2.2
CPSF4-207ENST00000451876 PI4KBQ9UBF8 816 aa28.76■■■□□ 2.2
CPSF4-207ENST00000451876 CASC1Q6TDU7 716 aa28.76■■■□□ 2.19
CPSF4-207ENST00000451876 NACAP1Q9BZK3 213 aa28.76■■■□□ 2.19
CPSF4-207ENST00000451876 NAPBQ9H115 298 aa28.76■■■□□ 2.19
CPSF4-207ENST00000451876 ARPP21Q9UBL0 812 aaPredicted RBP28.76■■■□□ 2.19
CPSF4-207ENST00000451876 HLA-DOAP06340 250 aa28.75■■■□□ 2.19
CPSF4-207ENST00000451876 C1QTNF8P60827 252 aa28.75■■■□□ 2.19
CPSF4-207ENST00000451876 DNAJC18Q9H819 358 aa28.75■■■□□ 2.19
CPSF4-207ENST00000451876 GBA2Q9HCG7 927 aaPredicted RBP28.75■■■□□ 2.19
CPSF4-207ENST00000451876 C12orf60Q5U649 245 aa28.74■■■□□ 2.19
CPSF4-207ENST00000451876 TTC6Q86TZ1 520 aa28.74■■■□□ 2.19
CPSF4-207ENST00000451876 USP2O75604 605 aaPredicted RBP28.73■■■□□ 2.19
CPSF4-207ENST00000451876 FGAP02671 866 aa28.73■■■□□ 2.19
CPSF4-207ENST00000451876 PTH1RQ03431 593 aa28.73■■■□□ 2.19
CPSF4-207ENST00000451876 HOOK2Q96ED9 719 aa28.73■■■□□ 2.19
CPSF4-207ENST00000451876 DSCC1Q9BVC3 393 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms