RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 ZHX2Q9Y6X8 837 aa21.25■□□□□ 0.99
PTPRN-209ENST00000451506 DOCK2Q92608 1830 aa21.25■□□□□ 0.99
PTPRN-209ENST00000451506 GJB1P08034 283 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 CCL5P13501 91 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 GJA8P48165 433 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 PRKCZQ05513 592 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 RASGRF1Q13972 1273 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 UBE2Q1Q7Z7E8 422 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 NKX2-3Q8TAU0 364 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 PICK1Q9NRD5 415 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 NOB1Q9ULX3 412 aaKnown RBP21.24■□□□□ 0.99
PTPRN-209ENST00000451506 AFG3L2Q9Y4W6 797 aa21.24■□□□□ 0.99
PTPRN-209ENST00000451506 FCGRTP55899 365 aa21.23■□□□□ 0.99
PTPRN-209ENST00000451506 FASTKD5Q7L8L6 764 aaKnown RBP21.23■□□□□ 0.99
PTPRN-209ENST00000451506 FAM163AQ96GL9 167 aaPredicted RBP21.23■□□□□ 0.99
PTPRN-209ENST00000451506 PDS5AQ29RF7 1337 aaKnown RBP21.23■□□□□ 0.99
PTPRN-209ENST00000451506 MYH2Q9UKX2 1941 aa21.22■□□□□ 0.99
PTPRN-209ENST00000451506 DDTLA6NHG4 134 aaPredicted RBP21.22■□□□□ 0.99
PTPRN-209ENST00000451506 SLURP2P0DP57 97 aa21.22■□□□□ 0.99
PTPRN-209ENST00000451506 TIMM10P62072 90 aa21.22■□□□□ 0.99
PTPRN-209ENST00000451506 DZIP1Q86YF9 867 aaKnown RBP21.22■□□□□ 0.99
PTPRN-209ENST00000451506 DDX4Q9NQI0 724 aaKnown RBP21.22■□□□□ 0.99
PTPRN-209ENST00000451506 GABRQQ9UN88 632 aa21.22■□□□□ 0.99
PTPRN-209ENST00000451506 HDAC5Q9UQL6 1122 aa21.22■□□□□ 0.99
PTPRN-209ENST00000451506 SLC45A1Q9Y2W3 748 aa21.22■□□□□ 0.99
PTPRN-209ENST00000451506 CT47B1P0C2W7 299 aaPredicted RBP21.21■□□□□ 0.99
PTPRN-209ENST00000451506 ZSCAN29Q8IWY8 852 aaPredicted RBP21.21■□□□□ 0.99
PTPRN-209ENST00000451506 MEIS3Q99687 375 aa21.21■□□□□ 0.99
PTPRN-209ENST00000451506 API5Q9BZZ5 524 aaKnown RBP21.21■□□□□ 0.99
PTPRN-209ENST00000451506 RNF208Q9H0X6 261 aa21.21■□□□□ 0.99
PTPRN-209ENST00000451506 ABCF2Q9UG63 623 aa21.21■□□□□ 0.99
PTPRN-209ENST00000451506 CTNND1O60716 968 aaKnown RBP21.2■□□□□ 0.98
PTPRN-209ENST00000451506 UBXN2AP68543 259 aa21.2■□□□□ 0.98
PTPRN-209ENST00000451506 SLF2Q8IX21 1173 aa21.2■□□□□ 0.98
PTPRN-209ENST00000451506 SLAIN1Q8ND83 568 aa21.2■□□□□ 0.98
PTPRN-209ENST00000451506 BIN2Q9UBW5 565 aaPredicted RBP21.2■□□□□ 0.98
PTPRN-209ENST00000451506 BTDP43251 543 aa21.19■□□□□ 0.98
PTPRN-209ENST00000451506 GADL1Q6ZQY3 521 aa21.19■□□□□ 0.98
PTPRN-209ENST00000451506 ZNF384Q8TF68 577 aa21.19■□□□□ 0.98
PTPRN-209ENST00000451506 DPF3Q92784 378 aa21.19■□□□□ 0.98
PTPRN-209ENST00000451506 MROH7-TTC4A0A0A0MT08 1334 aa21.19■□□□□ 0.98
PTPRN-209ENST00000451506 MGAMO43451 1857 aa21.19■□□□□ 0.98
PTPRN-209ENST00000451506 A0A1B0GUL7 405 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 RHBDL3P58872 404 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 PICALMQ13492 652 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 SPTY2D1Q68D10 685 aaPredicted RBP21.18■□□□□ 0.98
PTPRN-209ENST00000451506 CHRDL2Q6WN34 429 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 U2AF1L4Q8WU68 220 aaKnown RBP21.18■□□□□ 0.98
PTPRN-209ENST00000451506 XAGE2Q96GT9 111 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 UNC93B1Q9H1C4 597 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.18■□□□□ 0.98
PTPRN-209ENST00000451506 CEP290O15078 2479 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 PHIPQ8WWQ0 1821 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 DOCK1Q14185 1865 aa21.18■□□□□ 0.98
PTPRN-209ENST00000451506 PTPRFP10586 1907 aa21.17■□□□□ 0.98
PTPRN-209ENST00000451506 GPR75-ASB3A0A0A6YYF3 556 aa21.17■□□□□ 0.98
PTPRN-209ENST00000451506 TRIM75PA6NK02 468 aa21.17■□□□□ 0.98
PTPRN-209ENST00000451506 ADCY3O60266 1144 aa21.17■□□□□ 0.98
PTPRN-209ENST00000451506 FLT3LGP49771 235 aa21.17■□□□□ 0.98
PTPRN-209ENST00000451506 MECOMQ03112 1051 aa21.17■□□□□ 0.98
PTPRN-209ENST00000451506 TFCP2Q12800 502 aa21.17■□□□□ 0.98
PTPRN-209ENST00000451506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.17■□□□□ 0.98
PTPRN-209ENST00000451506 TBC1D12O60347 775 aa21.16■□□□□ 0.98
PTPRN-209ENST00000451506 NPM3O75607 178 aaKnown RBP21.16■□□□□ 0.98
PTPRN-209ENST00000451506 MTX1Q13505 466 aa21.16■□□□□ 0.98
PTPRN-209ENST00000451506 IRF5Q13568 498 aa21.16■□□□□ 0.98
PTPRN-209ENST00000451506 MVPQ14764 893 aaKnown RBP21.16■□□□□ 0.98
PTPRN-209ENST00000451506 CCDC84Q86UT8 332 aaPredicted RBP21.16■□□□□ 0.98
PTPRN-209ENST00000451506 PXYLP1Q8TE99 480 aa21.16■□□□□ 0.98
PTPRN-209ENST00000451506 HTATIP2Q9BUP3 242 aa21.16■□□□□ 0.98
PTPRN-209ENST00000451506 RBM27Q9P2N5 1060 aaKnown RBP21.16■□□□□ 0.98
PTPRN-209ENST00000451506 AGTPBP1Q9UPW5 1226 aa21.16■□□□□ 0.98
PTPRN-209ENST00000451506 AKAP2Q9Y2D5 859 aa21.16■□□□□ 0.98
PTPRN-209ENST00000451506 SRGAP3O43295 1099 aa21.15■□□□□ 0.98
PTPRN-209ENST00000451506 SGPL1O95470 568 aa21.15■□□□□ 0.98
PTPRN-209ENST00000451506 ELNP15502 786 aa21.15■□□□□ 0.98
PTPRN-209ENST00000451506 ERICH6Q7L0X2 663 aa21.15■□□□□ 0.98
PTPRN-209ENST00000451506 SMCR8Q8TEV9 937 aaPredicted RBP21.15■□□□□ 0.98
PTPRN-209ENST00000451506 TRIOBPQ9H2D6 2365 aa21.14■□□□□ 0.97
PTPRN-209ENST00000451506 TNPO2O14787 897 aaKnown RBP21.14■□□□□ 0.97
PTPRN-209ENST00000451506 FARP2O94887 1054 aaPredicted RBP21.14■□□□□ 0.97
PTPRN-209ENST00000451506 INHAP05111 366 aa21.14■□□□□ 0.97
PTPRN-209ENST00000451506 PRO3102Q9H379 93 aa21.14■□□□□ 0.97
PTPRN-209ENST00000451506 HMG20BQ9P0W2 317 aa21.14■□□□□ 0.97
PTPRN-209ENST00000451506 FAM196BA6NMK8 535 aa21.13■□□□□ 0.97
PTPRN-209ENST00000451506 GNAI3P08754 354 aa21.13■□□□□ 0.97
PTPRN-209ENST00000451506 RARSP54136 660 aaKnown RBP21.13■□□□□ 0.97
PTPRN-209ENST00000451506 TREML2Q5T2D2 321 aa21.13■□□□□ 0.97
PTPRN-209ENST00000451506 ARHGAP45Q92619 1136 aa21.13■□□□□ 0.97
PTPRN-209ENST00000451506 COL2A1P02458 1487 aaPredicted RBP21.13■□□□□ 0.97
PTPRN-209ENST00000451506 MAP4K4O95819 1239 aaPredicted RBP21.12■□□□□ 0.97
PTPRN-209ENST00000451506 PI16Q6UXB8 463 aa21.12■□□□□ 0.97
PTPRN-209ENST00000451506 ANKRD13CQ8N6S4 541 aa21.12■□□□□ 0.97
PTPRN-209ENST00000451506 NSUN4Q96CB9 384 aaKnown RBP21.12■□□□□ 0.97
PTPRN-209ENST00000451506 OSBPL5Q9H0X9 879 aaPredicted RBP21.12■□□□□ 0.97
PTPRN-209ENST00000451506 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.12■□□□□ 0.97
PTPRN-209ENST00000451506 SZT2Q5T011 3432 aa21.12■□□□□ 0.97
PTPRN-209ENST00000451506 RANBP2P49792 3224 aaKnown RBP21.12■□□□□ 0.97
PTPRN-209ENST00000451506 ZBTB7BO15156 539 aaPredicted RBP21.11■□□□□ 0.97
PTPRN-209ENST00000451506 TBC1D9Q6ZT07 1266 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms