RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 AFG3L2Q9Y4W6 797 aa8.25□□□□□ -1.09
PMS1-217ENST00000450931 PHF20L1A8MW92 1017 aa8.25□□□□□ -1.09
PMS1-217ENST00000450931 ZEB1P37275 1124 aaPredicted RBP8.25□□□□□ -1.09
PMS1-217ENST00000450931 NECAB2Q7Z6G3 386 aa8.25□□□□□ -1.09
PMS1-217ENST00000450931 COA7Q96BR5 231 aa8.25□□□□□ -1.09
PMS1-217ENST00000450931 SPINK5Q9NQ38 1064 aaPredicted RBP8.25□□□□□ -1.09
PMS1-217ENST00000450931 GNL3LQ9NVN8 582 aaKnown RBP8.25□□□□□ -1.09
PMS1-217ENST00000450931 GAKO14976 1311 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 EYA2O00167 538 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 CTNND1O60716 968 aaKnown RBP8.24□□□□□ -1.09
PMS1-217ENST00000450931 MAP4K4O95819 1239 aaPredicted RBP8.24□□□□□ -1.09
PMS1-217ENST00000450931 TFRCP02786 760 aaKnown RBP8.24□□□□□ -1.09
PMS1-217ENST00000450931 LDHBP07195 334 aaKnown RBP8.24□□□□□ -1.09
PMS1-217ENST00000450931 CYP2C8P10632 490 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 PTPRAP18433 802 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 FAM110CQ1W6H9 321 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 LRIT3Q3SXY7 679 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 GDF15Q99988 308 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 AGTPBP1Q9UPW5 1226 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 DDX60LQ5H9U9 1706 aaKnown RBP8.24□□□□□ -1.09
PMS1-217ENST00000450931 NPM3O75607 178 aaKnown RBP8.24□□□□□ -1.09
PMS1-217ENST00000450931 CIAO1O76071 339 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 PROCA1Q8NCQ7 364 aaPredicted RBP8.24□□□□□ -1.09
PMS1-217ENST00000450931 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.24□□□□□ -1.09
PMS1-217ENST00000450931 USP40Q9NVE5 1235 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 DENND2AQ9ULE3 1009 aa8.24□□□□□ -1.09
PMS1-217ENST00000450931 AK9Q5TCS8 1911 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 GCLCP48506 637 aaPredicted RBP8.23□□□□□ -1.09
PMS1-217ENST00000450931 NFIAQ12857 509 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 PABPC4Q13310 644 aaKnown RBP eCLIP8.23□□□□□ -1.09
PMS1-217ENST00000450931 SMCR8Q8TEV9 937 aaPredicted RBP8.23□□□□□ -1.09
PMS1-217ENST00000450931 DEFB118Q96PH6 123 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 ZHX2Q9Y6X8 837 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 SOX1O00570 391 aaPredicted RBP8.23□□□□□ -1.09
PMS1-217ENST00000450931 TBC1D12O60347 775 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 HMGCRP04035 888 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 RFX5P48382 616 aaPredicted RBP8.23□□□□□ -1.09
PMS1-217ENST00000450931 TCP10Q12799 353 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 GADL1Q6ZQY3 521 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 FAM163AQ96GL9 167 aaPredicted RBP8.23□□□□□ -1.09
PMS1-217ENST00000450931 STXBP5LQ9Y2K9 1186 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 LRRFIP2Q9Y608 721 aaKnown RBP8.23□□□□□ -1.09
PMS1-217ENST00000450931 MYH2Q9UKX2 1941 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 ATAD5Q96QE3 1844 aa8.23□□□□□ -1.09
PMS1-217ENST00000450931 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
PMS1-217ENST00000450931 ELNP15502 786 aa8.22□□□□□ -1.09
PMS1-217ENST00000450931 PRDX5P30044 214 aa8.22□□□□□ -1.09
PMS1-217ENST00000450931 RGS3P49796 1198 aa8.22□□□□□ -1.09
PMS1-217ENST00000450931 TRMT44Q8IYL2 757 aaKnown RBP8.22□□□□□ -1.09
PMS1-217ENST00000450931 PAWRQ96IZ0 340 aaKnown RBP8.22□□□□□ -1.09
PMS1-217ENST00000450931 OSBPL5Q9H0X9 879 aaPredicted RBP8.22□□□□□ -1.09
PMS1-217ENST00000450931 RPTORQ8N122 1335 aa8.22□□□□□ -1.09
PMS1-217ENST00000450931 ATP2B3Q16720 1220 aa8.21□□□□□ -1.09
PMS1-217ENST00000450931 NBPF3Q9H094 633 aa8.21□□□□□ -1.09
PMS1-217ENST00000450931 HDAC5Q9UQL6 1122 aa8.21□□□□□ -1.09
PMS1-217ENST00000450931 PLXNB2O15031 1838 aa8.21□□□□□ -1.09
PMS1-217ENST00000450931 MAST2Q6P0Q8 1798 aa8.21□□□□□ -1.09
PMS1-217ENST00000450931 CCDC184Q52MB2 194 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 SPTY2D1Q68D10 685 aaPredicted RBP8.21□□□□□ -1.1
PMS1-217ENST00000450931 ATG9AQ7Z3C6 839 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 MRPL50Q8N5N7 158 aaKnown RBP8.21□□□□□ -1.1
PMS1-217ENST00000450931 LRCH3Q96II8 777 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.1
PMS1-217ENST00000450931 MORF4L1Q9UBU8 362 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 STAP2Q9UGK3 403 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 SH3D19Q5HYK7 790 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 TDHQ8IZJ6 230 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 USP44Q9H0E7 712 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 C11orf49Q9H6J7 331 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 OGDHLQ9ULD0 1010 aa8.21□□□□□ -1.1
PMS1-217ENST00000450931 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
PMS1-217ENST00000450931 IL15P40933 162 aaPredicted RBP8.2□□□□□ -1.1
PMS1-217ENST00000450931 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 KLHDC4Q8TBB5 520 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 MRS2Q9HD23 443 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 CEP126Q9P2H0 1117 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 MROH7-TTC4A0A0A0MT08 1334 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 MAP3K21Q5TCX8 1036 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 ZFPM1Q8IX07 1006 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 C7orf61Q8IZ16 206 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 ANKRD13CQ8N6S4 541 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 SOCS4Q8WXH5 440 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 AS3MTQ9HBK9 375 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 GINM1Q9NU53 330 aa8.2□□□□□ -1.1
PMS1-217ENST00000450931 FRMPD3Q5JV73 1810 aa8.19□□□□□ -1.1
PMS1-217ENST00000450931 XRCC5P13010 732 aaKnown RBP8.19□□□□□ -1.1
PMS1-217ENST00000450931 FAM109BQ6ICB4 259 aaPredicted RBP8.19□□□□□ -1.1
PMS1-217ENST00000450931 DZIP1Q86YF9 867 aaKnown RBP8.19□□□□□ -1.1
PMS1-217ENST00000450931 ZSCAN29Q8IWY8 852 aaPredicted RBP8.19□□□□□ -1.1
PMS1-217ENST00000450931 GTF3C2Q8WUA4 911 aaPredicted RBP8.19□□□□□ -1.1
PMS1-217ENST00000450931 GJD2Q9UKL4 321 aa8.19□□□□□ -1.1
PMS1-217ENST00000450931 ZNF521Q96K83 1311 aa8.19□□□□□ -1.1
PMS1-217ENST00000450931 TRIOBPQ9H2D6 2365 aa8.19□□□□□ -1.1
PMS1-217ENST00000450931 GPR75-ASB3A0A0A6YYF3 556 aa8.19□□□□□ -1.1
PMS1-217ENST00000450931 DDTLA6NHG4 134 aaPredicted RBP8.19□□□□□ -1.1
PMS1-217ENST00000450931 TRIM75PA6NK02 468 aa8.19□□□□□ -1.1
PMS1-217ENST00000450931 IGSF3O75054 1194 aa8.19□□□□□ -1.1
PMS1-217ENST00000450931 DEFB123Q8N688 67 aa8.19□□□□□ -1.1
PMS1-217ENST00000450931 ZNF280CQ8ND82 737 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms