RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NNTQ13423 1086 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 SAFB2Q14151 953 aaKnown RBP eCLIP2.47□□□□□ -2.01
USP53-202ENST00000450251 E2F4Q16254 413 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 ERCC6LQ2NKX8 1250 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 GIMAP6Q6P9H5 292 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 TMTC1Q8IUR5 882 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 TRIM42Q8IWZ5 723 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 CCDC26Q8TAB7 109 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 HNRNPLLQ8WVV9 542 aaKnown RBP2.47□□□□□ -2.01
USP53-202ENST00000450251 TRAPPC9Q96Q05 1148 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 IWS1Q96ST2 819 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 PLVAPQ9BX97 442 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 FAM192AQ9GZU8 254 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 ANKRD2Q9GZV1 360 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 DKK3Q9UBP4 350 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 RNF14Q9UBS8 474 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 GGA2Q9UJY4 613 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 ADAM21Q9UKJ8 722 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 WDR37Q9Y2I8 494 aa2.47□□□□□ -2.01
USP53-202ENST00000450251 A0A0G2JS52 829 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 APBB1O00213 710 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 MAP3K7O43318 606 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 KDM1AO60341 852 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 CHGBP05060 677 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 LMNB1P20700 586 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 PHBP35232 272 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 AMPHP49418 695 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 PDE1BQ01064 536 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 MYL5Q02045 173 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 DDR1Q08345 913 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 CAMK4Q16566 473 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 RASIP1Q5U651 963 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 NBPF15Q8N660 670 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 AOPEPQ8N6M6 819 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 FSIP1Q8NA03 581 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 ATP6V0A1Q93050 837 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 CCDC28BQ9BUN5 200 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 CBX8Q9HC52 389 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 PDE11AQ9HCR9 933 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 POLE3Q9NRF9 147 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 NOB1Q9ULX3 412 aaKnown RBP2.46□□□□□ -2.01
USP53-202ENST00000450251 IKBKGQ9Y6K9 419 aa2.46□□□□□ -2.01
USP53-202ENST00000450251 RASGRF2O14827 1237 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 C21orf2O43822 256 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 ZEB2O60315 1214 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 IMPDH2P12268 514 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 IBSPP21815 317 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 CCND1P24385 295 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 POLD1P28340 1107 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 TPP2P29144 1249 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 HSPA9P38646 679 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 NOP14P78316 857 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 RBM6P78332 1123 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 FAM160A1Q05DH4 1040 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 MAP3K12Q12852 859 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 HLTFQ14527 1009 aaKnown RBP eCLIP2.46□□□□□ -2.02
USP53-202ENST00000450251 KBTBD12Q3ZCT8 623 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 KMT5BQ4FZB7 885 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 GLE1Q53GS7 698 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 C8orf74Q6P047 294 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 CCDC62Q6P9F0 684 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 TERB1Q8NA31 727 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 KLHDC4Q8TBB5 520 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 PRG4Q92954 1404 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 NUP58Q9BVL2 599 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 OSBPL1AQ9BXW6 950 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 UNC45AQ9H3U1 944 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 NKIRAS1Q9NYS0 192 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 EPS15L1Q9UBC2 864 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 CDC23Q9UJX2 597 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 HDAC9Q9UKV0 1011 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 CNPY2Q9Y2B0 182 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 SCINQ9Y6U3 715 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 PTPRGP23470 1445 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 GALR2O43603 387 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 STX10O60499 249 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 SUN1O94901 812 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 IGHDP01880 384 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 MSL3P1P0C860 447 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 PSEN1P49768 467 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 PPP1R7Q15435 360 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 CCDC178Q5BJE1 867 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 ZNF569Q5MCW4 686 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 VPS53Q5VIR6 699 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 HHATQ5VTY9 493 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 RALYLQ86SE5 291 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 FAM81AQ8TBF8 368 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 MIEF2Q96C03 454 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 TSG101Q99816 390 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 BPIFA3Q9BQP9 254 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 MAK16Q9BXY0 300 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 DRC3Q9H069 523 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 C10orf88Q9H8K7 445 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 JADE2Q9NQC1 790 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 MROH2AA6NES4 1674 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 MEFVO15553 781 aaPredicted RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 GSTA1P08263 222 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 HNRNPH1P31943 449 aaKnown RBP2.46□□□□□ -2.02
USP53-202ENST00000450251 MAGEA8P43361 318 aa2.46□□□□□ -2.02
USP53-202ENST00000450251 PAPOLAP51003 745 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms