RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.32
SYVN1-204ENST00000449943 MAGEB6Q8N7X4 407 aa13.02□□□□□ -0.32
SYVN1-204ENST00000449943 ARMT1Q9H993 441 aa13.02□□□□□ -0.32
SYVN1-204ENST00000449943 MBD4O95243 580 aa13.02□□□□□ -0.33
SYVN1-204ENST00000449943 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
SYVN1-204ENST00000449943 PTPAQ15257 358 aa13.02□□□□□ -0.33
SYVN1-204ENST00000449943 NLRP10Q86W26 655 aa13.02□□□□□ -0.33
SYVN1-204ENST00000449943 METTL16Q86W50 562 aaKnown RBP13.02□□□□□ -0.33
SYVN1-204ENST00000449943 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.02□□□□□ -0.33
SYVN1-204ENST00000449943 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
SYVN1-204ENST00000449943 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.33
SYVN1-204ENST00000449943 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.33
SYVN1-204ENST00000449943 IKBKBO14920 756 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 PIGBQ92521 554 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 HSD3B7Q9H2F3 369 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 ADAMTSL3P82987 1691 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 MAP3K15Q6ZN16 1313 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 BTBD18B2RXH4 712 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 CBFA2T2O43439 604 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 GUCY1A2P33402 732 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 NUP133Q8WUM0 1156 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
SYVN1-204ENST00000449943 PPP6R2O75170 966 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 RESP18Q5W5W9 173 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 GIGYF2Q6Y7W6 1299 aaKnown RBP13.01□□□□□ -0.33
SYVN1-204ENST00000449943 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 HPSEQ9Y251 543 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 URI1O94763 535 aaPredicted RBP13.01□□□□□ -0.33
SYVN1-204ENST00000449943 PDE8BO95263 885 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 KRT222Q8N1A0 295 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 TMEM87BQ96K49 555 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 ZSWIM5Q9P217 1185 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 TUBE1Q9UJT0 475 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
SYVN1-204ENST00000449943 GRIN1Q05586 938 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 PDE4BQ07343 736 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 UBE3CQ15386 1083 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 GRAMD1CQ8IYS0 662 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 IGDCC4Q8TDY8 1250 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 STRBPQ96SI9 672 aaKnown RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 PRKAB2O43741 272 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 TDO2P48775 406 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
SYVN1-204ENST00000449943 BRINP3Q76B58 766 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 EPB41L4AQ9HCS5 686 aaPredicted RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 SPEF2Q9C093 1822 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 FOXP4Q8IVH2 680 aaPredicted RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 NGLY1Q96IV0 654 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 ST7Q9NRC1 585 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13□□□□□ -0.334e-6■■■□□ 14.9
SYVN1-204ENST00000449943 CUTAO60888 179 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 DIS3L2Q8IYB7 885 aaKnown RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 RASSF8Q8NHQ8 419 aa13□□□□□ -0.33
SYVN1-204ENST00000449943 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 MORC2Q9Y6X9 1032 aaPredicted RBP13□□□□□ -0.33
SYVN1-204ENST00000449943 TOM1O60784 492 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 NTRK3Q16288 839 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 ARHGAP29Q52LW3 1261 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 MIGA1Q8NAN2 632 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 MNS1Q8NEH6 495 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 CARD10Q9BWT7 1032 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 POLR2DO15514 142 aaKnown RBP12.99□□□□□ -0.33
SYVN1-204ENST00000449943 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 SART3Q15020 963 aaKnown RBP12.99□□□□□ -0.33
SYVN1-204ENST00000449943 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 KCND1Q9NSA2 647 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 ABCC12Q96J65 1359 aa12.99□□□□□ -0.33
SYVN1-204ENST00000449943 ETF1P62495 437 aaKnown RBP12.98□□□□□ -0.33
SYVN1-204ENST00000449943 MFSD6Q6ZSS7 791 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 SPATA5Q8NB90 893 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 SERTAD1Q9UHV2 236 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 NR5A1Q13285 461 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 TRIM22Q8IYM9 498 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 IQSEC3Q9UPP2 1182 aaPredicted RBP12.98□□□□□ -0.33
SYVN1-204ENST00000449943 UQCRFS1P1P0C7P4 283 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
SYVN1-204ENST00000449943 MAP3K12Q12852 859 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 RTN1Q16799 776 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 COL5A2P05997 1499 aaPredicted RBP12.98□□□□□ -0.33
SYVN1-204ENST00000449943 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
SYVN1-204ENST00000449943 BMP6P22004 513 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 PUM3Q15397 648 aaKnown RBP12.98□□□□□ -0.33
SYVN1-204ENST00000449943 L2HGDHQ9H9P8 463 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 TACC3Q9Y6A5 838 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 SLC4A4Q9Y6R1 1079 aa12.98□□□□□ -0.33
SYVN1-204ENST00000449943 TCRBV5S4A2TA0A5A2 114 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms