RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
TNF-208ENST00000449264 GIMAP6Q6P9H5 292 aa17.42■□□□□ 0.38
TNF-208ENST00000449264 MTMR14Q8NCE2 650 aa17.42■□□□□ 0.38
TNF-208ENST00000449264 TMOD2Q9NZR1 351 aa17.42■□□□□ 0.38
TNF-208ENST00000449264 CYP2D7A0A087X1C5 515 aa17.41■□□□□ 0.38
TNF-208ENST00000449264 WNT10BO00744 389 aa17.41■□□□□ 0.38
TNF-208ENST00000449264 ZNF213O14771 459 aa17.41■□□□□ 0.38
TNF-208ENST00000449264 MYO1BO43795 1136 aa17.41■□□□□ 0.38
TNF-208ENST00000449264 MMP14P50281 582 aa17.41■□□□□ 0.38
TNF-208ENST00000449264 NBPF9Q3BBW0 867 aa17.41■□□□□ 0.38
TNF-208ENST00000449264 VEZTQ9HBM0 779 aa17.41■□□□□ 0.38
TNF-208ENST00000449264 DDX4Q9NQI0 724 aaKnown RBP17.41■□□□□ 0.38
TNF-208ENST00000449264 USP17L12C9JPN9 530 aa17.4■□□□□ 0.38
TNF-208ENST00000449264 USP17L21D6R901 530 aa17.4■□□□□ 0.38
TNF-208ENST00000449264 EPS15P42566 896 aa17.4■□□□□ 0.38
TNF-208ENST00000449264 ANAPC15P60006 121 aa17.4■□□□□ 0.38
TNF-208ENST00000449264 STK11IPQ8N1F8 1099 aa17.4■□□□□ 0.38
TNF-208ENST00000449264 ARPP21Q9UBL0 812 aaPredicted RBP17.4■□□□□ 0.38
TNF-208ENST00000449264 CYP2D6P10635 497 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 PPARAQ07869 468 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 TCP10Q12799 353 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 SPDYE2Q495Y8 402 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 CTR9Q6PD62 1173 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 AMOTL1Q8IY63 956 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 TRPM4Q8TD43 1214 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 ZBED3Q96IU2 234 aaPredicted RBP17.39■□□□□ 0.37
TNF-208ENST00000449264 ZNF70Q9UC06 446 aaPredicted RBP17.39■□□□□ 0.37
TNF-208ENST00000449264 MKRN1Q9UHC7 482 aaKnown RBP17.39■□□□□ 0.37
TNF-208ENST00000449264 TCP10L2B9ZVM9 353 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
TNF-208ENST00000449264 EVX2Q03828 476 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 CTDSPL2Q05D32 466 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 TBC1D10CQ8IV04 446 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 KCNB2Q92953 911 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 KIF2CQ99661 725 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 NBPF3Q9H094 633 aa17.39■□□□□ 0.37
TNF-208ENST00000449264 RBM19Q9Y4C8 960 aaKnown RBP17.39■□□□□ 0.37
TNF-208ENST00000449264 GLTPD2A6NH11 291 aa17.38■□□□□ 0.37
TNF-208ENST00000449264 SMIM22K7EJ46 135 aa17.38■□□□□ 0.37
TNF-208ENST00000449264 ADCK5Q3MIX3 580 aa17.38■□□□□ 0.37
TNF-208ENST00000449264 STOX1Q6ZVD7 989 aa17.38■□□□□ 0.37
TNF-208ENST00000449264 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
TNF-208ENST00000449264 IDI2Q9BXS1 227 aa17.38■□□□□ 0.37
TNF-208ENST00000449264 OSBPL5Q9H0X9 879 aaPredicted RBP17.38■□□□□ 0.37
TNF-208ENST00000449264 FAM198AQ9UFP1 575 aa17.38■□□□□ 0.37
TNF-208ENST00000449264 E7EWF7 191 aa17.37■□□□□ 0.37
TNF-208ENST00000449264 SCN4AP35499 1836 aa17.37■□□□□ 0.37
TNF-208ENST00000449264 ASTN2O75129 1339 aaPredicted RBP17.37■□□□□ 0.37
TNF-208ENST00000449264 MYH8P13535 1937 aa17.36■□□□□ 0.37
TNF-208ENST00000449264 CASTP20810 708 aaKnown RBP17.36■□□□□ 0.37
TNF-208ENST00000449264 KRT32Q14532 448 aa17.36■□□□□ 0.37
TNF-208ENST00000449264 SBK1Q52WX2 424 aa17.36■□□□□ 0.37
TNF-208ENST00000449264 ZFPM1Q8IX07 1006 aa17.36■□□□□ 0.37
TNF-208ENST00000449264 L3MBTL3Q96JM7 780 aaPredicted RBP17.36■□□□□ 0.37
TNF-208ENST00000449264 UPF3BQ9BZI7 483 aaKnown RBP17.36■□□□□ 0.37
TNF-208ENST00000449264 ADARB2Q9NS39 739 aaKnown RBP17.36■□□□□ 0.37
TNF-208ENST00000449264 TSGA10IPQ3SY00 556 aa17.36■□□□□ 0.37
TNF-208ENST00000449264 C12orf60Q5U649 245 aa17.36■□□□□ 0.37
TNF-208ENST00000449264 ZSCAN29Q8IWY8 852 aaPredicted RBP17.36■□□□□ 0.37
TNF-208ENST00000449264 TOMM22Q9NS69 142 aa17.36■□□□□ 0.37
TNF-208ENST00000449264 SCAF8Q9UPN6 1271 aaKnown RBP17.36■□□□□ 0.37
TNF-208ENST00000449264 SIPA1L1O43166 1804 aa17.35■□□□□ 0.37
TNF-208ENST00000449264 NEDD4P46934 1319 aa17.35■□□□□ 0.37
TNF-208ENST00000449264 WDR90Q96KV7 1748 aa17.35■□□□□ 0.37
TNF-208ENST00000449264 CPA1P15085 419 aa17.35■□□□□ 0.37
TNF-208ENST00000449264 PLCD1P51178 756 aa17.35■□□□□ 0.37
TNF-208ENST00000449264 INCENPQ9NQS7 918 aa17.35■□□□□ 0.37
TNF-208ENST00000449264 HACL1Q9UJ83 578 aa17.35■□□□□ 0.37
TNF-208ENST00000449264 ENTPD3O75355 529 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 SLC3A2P08195 630 aaKnown RBP17.34■□□□□ 0.37
TNF-208ENST00000449264 RABEP1Q15276 862 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 RRP12Q5JTH9 1297 aaKnown RBP17.34■□□□□ 0.37
TNF-208ENST00000449264 AKNAD1Q5T1N1 836 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 MFSD6Q6ZSS7 791 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 RALYLQ86SE5 291 aaKnown RBP17.34■□□□□ 0.37
TNF-208ENST00000449264 DYNLL2Q96FJ2 89 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 NEK1Q96PY6 1258 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 ANAPC4Q9UJX5 808 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 CNTNAP1P78357 1384 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 ROBO3Q96MS0 1386 aa17.34■□□□□ 0.37
TNF-208ENST00000449264 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.37
TNF-208ENST00000449264 PRDM1O75626 825 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 HLA-DOAP06340 250 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 PSMA5P28066 241 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.37
TNF-208ENST00000449264 TRDNQ13061 729 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 COL9A3Q14050 684 aaPredicted RBP17.33■□□□□ 0.37
TNF-208ENST00000449264 ANGEL2Q5VTE6 544 aaKnown RBP17.33■□□□□ 0.37
TNF-208ENST00000449264 BLOC1S2Q6QNY1 142 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 STAG1Q8WVM7 1258 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 IL17RAQ96F46 866 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 RNF41Q9H4P4 317 aaPredicted RBP17.33■□□□□ 0.37
TNF-208ENST00000449264 GGA3Q9NZ52 723 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 TACC3Q9Y6A5 838 aa17.33■□□□□ 0.37
TNF-208ENST00000449264 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.37
TNF-208ENST00000449264 DDTLA6NHG4 134 aaPredicted RBP17.32■□□□□ 0.36
TNF-208ENST00000449264 EPHX2P34913 555 aa17.32■□□□□ 0.36
TNF-208ENST00000449264 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
TNF-208ENST00000449264 TNFAIP1Q13829 316 aa17.32■□□□□ 0.36
TNF-208ENST00000449264 FKBP1CQ5VVH2 108 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms