RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ALDH1B1P30837 517 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 GSTO1P78417 241 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 GPSM2P81274 684 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 CHAF1AQ13111 956 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 L1TD1Q5T7N2 865 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 TBC1D10CQ8IV04 446 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 MIGA1Q8NAN2 632 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 RIOK1Q9BRS2 568 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 TMX4Q9H1E5 349 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 NAP1L2Q9ULW6 460 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 ANGEL1Q9UNK9 670 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-203ENST00000448935 PPEF1O14829 653 aaPredicted RBP12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 MECOMQ03112 1051 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 SART3Q15020 963 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 DZIP1Q86YF9 867 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 TMEM87AQ8NBN3 555 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 CRNKL1Q9BZJ0 848 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 ANAPC4Q9UJX5 808 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 KLF18A0A0U1RQI7 1052 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 LDHBP07195 334 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 LDHCP07864 332 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 NT5C2P49902 561 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 ANTXR2P58335 489 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 PPP1R15BQ5SWA1 713 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 CPLX2Q6PUV4 134 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 TXNRD3Q86VQ6 643 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 RGS22Q8NE09 1264 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 NSUN7Q8NE18 718 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 ZMYND15Q9H091 742 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 ATP8A2Q9NTI2 1148 aa12.4□□□□□ -0.42
VIPAS39-203ENST00000448935 ERICH2A1L162 156 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 B4E1Z4 1266 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 H3BQV1 296 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 TRIM66O15016 1216 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 PRKAB2O43741 272 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 MMP10P09238 476 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 SRGNP10124 158 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 IL1R1P14778 569 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 LIFRP42702 1097 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 PPARAQ07869 468 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 PDE4DQ08499 809 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 ADGRA1Q86SQ6 560 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 TBC1D22AQ8WUA7 517 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 MASTLQ96GX5 879 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 ZSCAN16Q9H4T2 348 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 STK32BQ9NY57 414 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 LTBP1Q14766 1721 aa12.39□□□□□ -0.43
VIPAS39-203ENST00000448935 TCHHQ07283 1943 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 PTPDC1A2A3K4 754 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 GOLGA6L3A6NEY3 463 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 GOLGA8BA8MQT2 603 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 CPLX1O14810 134 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 CDKL5O76039 1030 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 BAG3O95817 575 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 KRT85P78386 507 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 TBC1D16Q8TBP0 767 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 SYAP1Q96A49 352 aaPredicted RBP12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 CD209Q9NNX6 404 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 LAMB1P07942 1786 aa12.38□□□□□ -0.43
VIPAS39-203ENST00000448935 NEDD4P46934 1319 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 JAK2O60674 1132 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 PRDX5P30044 214 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 CTDSPL2Q05D32 466 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 CYB5R4Q7L1T6 521 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 SGMS1Q86VZ5 419 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 ESR2Q92731 530 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 ARPP21Q9UBL0 812 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 MINDY4BA8MYZ0 360 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 IFIT3O14879 490 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 KDM4AO75164 1064 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 RCAN1P53805 252 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 DYNLL1P63167 89 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 SLC15A2Q16348 729 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 CDC37L1Q7L3B6 337 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 IGDCC4Q8TDY8 1250 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 SDR42E1Q8WUS8 393 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 DDX11Q96FC9 970 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 GPHNQ9NQX3 736 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 TOMM22Q9NS69 142 aa12.37□□□□□ -0.43
VIPAS39-203ENST00000448935 ZSWIM5Q9P217 1185 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms