RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 DBNLQ9UJU6 430 aaKnown RBP21.71■■□□□ 1.07
DDX56-207ENST00000448192 RFX7Q2KHR2 1363 aa21.71■■□□□ 1.07
DDX56-207ENST00000448192 MAST2Q6P0Q8 1798 aa21.7■■□□□ 1.06
DDX56-207ENST00000448192 CETPP11597 493 aa21.7■■□□□ 1.06
DDX56-207ENST00000448192 RHBDL3P58872 404 aa21.7■■□□□ 1.06
DDX56-207ENST00000448192 SNAPC2Q13487 334 aa21.7■■□□□ 1.06
DDX56-207ENST00000448192 SH3BP5LQ7L8J4 393 aa21.7■■□□□ 1.06
DDX56-207ENST00000448192 EAF2Q96CJ1 260 aaPredicted RBP21.7■■□□□ 1.06
DDX56-207ENST00000448192 TLR7Q9NYK1 1049 aaKnown RBP21.7■■□□□ 1.06
DDX56-207ENST00000448192 DDX19BQ9UMR2 479 aa21.7■■□□□ 1.06
DDX56-207ENST00000448192 DDTLA6NHG4 134 aaPredicted RBP21.69■■□□□ 1.06
DDX56-207ENST00000448192 PPATQ06203 517 aa21.69■■□□□ 1.06
DDX56-207ENST00000448192 TAF1CQ15572 869 aaPredicted RBP21.69■■□□□ 1.06
DDX56-207ENST00000448192 ERC1Q8IUD2 1116 aa21.69■■□□□ 1.06
DDX56-207ENST00000448192 FAM43AQ8N2R8 423 aa21.69■■□□□ 1.06
DDX56-207ENST00000448192 NOL10Q9BSC4 688 aaKnown RBP21.69■■□□□ 1.06
DDX56-207ENST00000448192 HPS5Q9UPZ3 1129 aa21.69■■□□□ 1.06
DDX56-207ENST00000448192 CYP2E1P05181 493 aaPredicted RBP21.68■■□□□ 1.06
DDX56-207ENST00000448192 NAA16Q6N069 864 aaPredicted RBP21.68■■□□□ 1.06
DDX56-207ENST00000448192 ZNF512BQ96KM6 892 aaPredicted RBP21.68■■□□□ 1.06
DDX56-207ENST00000448192 ZFYVE28Q9HCC9 887 aa21.68■■□□□ 1.06
DDX56-207ENST00000448192 ATRNL1Q5VV63 1379 aa21.68■■□□□ 1.06
DDX56-207ENST00000448192 ZAP70P43403 619 aa21.67■■□□□ 1.06
DDX56-207ENST00000448192 FBXO46Q6PJ61 603 aaPredicted RBP21.67■■□□□ 1.06
DDX56-207ENST00000448192 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.67■■□□□ 1.06
DDX56-207ENST00000448192 ERO1AQ96HE7 468 aa21.67■■□□□ 1.06
DDX56-207ENST00000448192 TRIM17Q9Y577 477 aa21.67■■□□□ 1.06
DDX56-207ENST00000448192 PHF20L1A8MW92 1017 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 BTBD19C9JJ37 291 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 MAP4K4O95819 1239 aaPredicted RBP21.66■■□□□ 1.06
DDX56-207ENST00000448192 SLURP2P0DP57 97 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 SP3Q02447 781 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 NOL9Q5SY16 702 aaKnown RBP21.66■■□□□ 1.06
DDX56-207ENST00000448192 AACSQ86V21 672 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 RPAP2Q8IXW5 612 aaPredicted RBP21.66■■□□□ 1.06
DDX56-207ENST00000448192 TEX11Q8IYF3 940 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 CD99L2Q8TCZ2 262 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 ZBTB40Q9NUA8 1239 aa21.66■■□□□ 1.06
DDX56-207ENST00000448192 APBB1O00213 710 aa21.65■■□□□ 1.06
DDX56-207ENST00000448192 SOX10P56693 466 aa21.65■■□□□ 1.06
DDX56-207ENST00000448192 SH3RF3Q8TEJ3 882 aaPredicted RBP21.65■■□□□ 1.06
DDX56-207ENST00000448192 IL1RAPL2Q9NP60 686 aa21.65■■□□□ 1.06
DDX56-207ENST00000448192 PICK1Q9NRD5 415 aa21.65■■□□□ 1.06
DDX56-207ENST00000448192 AATFQ9NY61 560 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDX56-207ENST00000448192 DOCK1Q14185 1865 aa21.64■■□□□ 1.06
DDX56-207ENST00000448192 CDK5RAP2Q96SN8 1893 aa21.64■■□□□ 1.06
DDX56-207ENST00000448192 HMMRO75330 724 aa21.64■■□□□ 1.05
DDX56-207ENST00000448192 NPM3O75607 178 aaKnown RBP21.64■■□□□ 1.05
DDX56-207ENST00000448192 BAG3O95817 575 aa21.64■■□□□ 1.05
DDX56-207ENST00000448192 RGS19P49795 217 aa21.64■■□□□ 1.05
DDX56-207ENST00000448192 MLLT1Q03111 559 aaPredicted RBP21.64■■□□□ 1.05
DDX56-207ENST00000448192 OTOP1Q7RTM1 612 aa21.64■■□□□ 1.05
DDX56-207ENST00000448192 RHPN1Q8TCX5 695 aa21.64■■□□□ 1.05
DDX56-207ENST00000448192 BCL11AQ9H165 835 aa21.64■■□□□ 1.05
DDX56-207ENST00000448192 CHMP4BQ9H444 224 aaKnown RBP21.64■■□□□ 1.05
DDX56-207ENST00000448192 PIH1D3Q9NQM4 214 aaKnown RBP21.64■■□□□ 1.05
DDX56-207ENST00000448192 MAP3K10Q02779 954 aa21.63■■□□□ 1.05
DDX56-207ENST00000448192 SCYL3Q8IZE3 742 aa21.63■■□□□ 1.05
DDX56-207ENST00000448192 OSBPL5Q9H0X9 879 aaPredicted RBP21.63■■□□□ 1.05
DDX56-207ENST00000448192 ZCCHC17Q9NP64 241 aaKnown RBP21.63■■□□□ 1.05
DDX56-207ENST00000448192 KCNH4Q9UQ05 1017 aa21.63■■□□□ 1.05
DDX56-207ENST00000448192 FAM196BA6NMK8 535 aa21.62■■□□□ 1.05
DDX56-207ENST00000448192 IDH1O75874 414 aaKnown RBP21.62■■□□□ 1.05
DDX56-207ENST00000448192 C20orf194Q5TEA3 1177 aa21.62■■□□□ 1.05
DDX56-207ENST00000448192 ADGRA1Q86SQ6 560 aa21.62■■□□□ 1.05
DDX56-207ENST00000448192 SIRT2Q8IXJ6 389 aa21.62■■□□□ 1.05
DDX56-207ENST00000448192 EFCC1Q9HA90 598 aa21.62■■□□□ 1.05
DDX56-207ENST00000448192 NDUFB9Q9Y6M9 179 aa21.62■■□□□ 1.05
DDX56-207ENST00000448192 ZHX2Q9Y6X8 837 aa21.62■■□□□ 1.05
DDX56-207ENST00000448192 CTNND1O60716 968 aaKnown RBP21.61■■□□□ 1.05
DDX56-207ENST00000448192 PLCG2P16885 1265 aa21.61■■□□□ 1.05
DDX56-207ENST00000448192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.61■■□□□ 1.05
DDX56-207ENST00000448192 FOCADQ5VW36 1801 aa21.61■■□□□ 1.05
DDX56-207ENST00000448192 PHIPQ8WWQ0 1821 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 ATAD5Q96QE3 1844 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 COL2A1P02458 1487 aaPredicted RBP21.6■■□□□ 1.05
DDX56-207ENST00000448192 CXCL11O14625 94 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 TLR2O60603 784 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 PTPRAP18433 802 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 CYP7A1P22680 504 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 PPP4CP60510 307 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 ANKRD23Q86SG2 305 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 CLASRPQ8N2M8 674 aaKnown RBP21.6■■□□□ 1.05
DDX56-207ENST00000448192 TGFBRAP1Q8WUH2 860 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 KIF1BPQ96EK5 621 aa21.6■■□□□ 1.05
DDX56-207ENST00000448192 PDHXO00330 501 aa21.59■■□□□ 1.05
DDX56-207ENST00000448192 TBC1D12O60347 775 aa21.59■■□□□ 1.05
DDX56-207ENST00000448192 CAP1Q01518 475 aa21.59■■□□□ 1.05
DDX56-207ENST00000448192 MAPKAPK5Q8IW41 473 aa21.59■■□□□ 1.05
DDX56-207ENST00000448192 ANTXR1Q9H6X2 564 aa21.59■■□□□ 1.05
DDX56-207ENST00000448192 PTPRFP10586 1907 aa21.59■■□□□ 1.05
DDX56-207ENST00000448192 ZSWIM8A7E2V4 1837 aa21.58■■□□□ 1.05
DDX56-207ENST00000448192 IGSF3O75054 1194 aa21.58■■□□□ 1.05
DDX56-207ENST00000448192 MOGSQ13724 837 aa21.58■■□□□ 1.05
DDX56-207ENST00000448192 ARHGEF6Q15052 776 aa21.58■■□□□ 1.05
DDX56-207ENST00000448192 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.58■■□□□ 1.05
DDX56-207ENST00000448192 PTPN22Q9Y2R2 807 aa21.58■■□□□ 1.05
DDX56-207ENST00000448192 RAB11FIP3O75154 756 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms