RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 FAM198AQ9UFP1 575 aa13.42□□□□□ -0.26
NPIPB3-202ENST00000448012 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
NPIPB3-202ENST00000448012 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
NPIPB3-202ENST00000448012 GPR75-ASB3A0A0A6YYF3 556 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 INPP5BP32019 993 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 MCAMP43121 646 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 TBC1D9Q6ZT07 1266 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 MS4A4AQ96JQ5 239 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 DBNDD2Q9BQY9 259 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 SNRKQ9NRH2 765 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 HPS5Q9UPZ3 1129 aa13.41□□□□□ -0.26
NPIPB3-202ENST00000448012 IRF6O14896 467 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 PI16Q6UXB8 463 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 TEX11Q8IYF3 940 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 NSUN4Q96CB9 384 aaKnown RBP13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 PTPN18Q99952 460 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 TRIM34Q9BYJ4 488 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 R3HDMLQ9H3Y0 253 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 EFCC1Q9HA90 598 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 ZNF112Q9UJU3 913 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 MYH13Q9UKX3 1938 aa13.4□□□□□ -0.26
NPIPB3-202ENST00000448012 NOL9Q5SY16 702 aaKnown RBP13.39□□□□□ -0.27
NPIPB3-202ENST00000448012 AACSQ86V21 672 aa13.39□□□□□ -0.27
NPIPB3-202ENST00000448012 SCYL3Q8IZE3 742 aa13.39□□□□□ -0.27
NPIPB3-202ENST00000448012 ZNF512BQ96KM6 892 aaPredicted RBP13.39□□□□□ -0.27
NPIPB3-202ENST00000448012 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
NPIPB3-202ENST00000448012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.39□□□□□ -0.27
NPIPB3-202ENST00000448012 CXCL11O14625 94 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 CTNND1O60716 968 aaKnown RBP13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 RGS19P49795 217 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 SOX10P56693 466 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 OTOP1Q7RTM1 612 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 ZFPM1Q8IX07 1006 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 CLASRPQ8N2M8 674 aaKnown RBP13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 CD99L2Q8TCZ2 262 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 CCDC8Q9H0W5 538 aaPredicted RBP13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 EXOC6BQ9Y2D4 811 aa13.38□□□□□ -0.27
NPIPB3-202ENST00000448012 BTBD19C9JJ37 291 aa13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 IDH1O75874 414 aaKnown RBP13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 IFIT2P09913 472 aaKnown RBP13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 FASTKD5Q7L8L6 764 aaKnown RBP13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 ANKRD23Q86SG2 305 aa13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 KIF1BPQ96EK5 621 aa13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 ZHX2Q9Y6X8 837 aa13.37□□□□□ -0.27
NPIPB3-202ENST00000448012 DDTLA6NHG4 134 aaPredicted RBP13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 APBB1O00213 710 aa13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 TLR2O60603 784 aa13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 ZAP70P43403 619 aa13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 RHBDL3P58872 404 aa13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 TMED8Q6PL24 325 aaPredicted RBP13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 PARK7Q99497 189 aaKnown RBP13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 OSBPL5Q9H0X9 879 aaPredicted RBP13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 AATFQ9NY61 560 aaKnown RBP eCLIP13.36□□□□□ -0.27
NPIPB3-202ENST00000448012 PDHXO00330 501 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 TBC1D12O60347 775 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 RAB11FIP3O75154 756 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 GNRH1P01148 92 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 CYP2E1P05181 493 aaPredicted RBP13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 HLA-DOAP06340 250 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 PTPRAP18433 802 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 CYP7A1P22680 504 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 HOXD10P28358 340 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 SH3BP5LQ7L8J4 393 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 NBPF11Q86T75 865 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 SH3RF3Q8TEJ3 882 aaPredicted RBP13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 TBC1D2Q9BYX2 928 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 DDX4Q9NQI0 724 aaKnown RBP13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 HERC5Q9UII4 1024 aaKnown RBP13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
NPIPB3-202ENST00000448012 RFX7Q2KHR2 1363 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 PHF20L1A8MW92 1017 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 USP5P45974 858 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 PPP4CP60510 307 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 GADL1Q6ZQY3 521 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 AS3MTQ9HBK9 375 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 ZBTB40Q9NUA8 1239 aa13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 TLR7Q9NYK1 1049 aaKnown RBP13.34□□□□□ -0.27
NPIPB3-202ENST00000448012 TRIM75PA6NK02 468 aa13.33□□□□□ -0.28
NPIPB3-202ENST00000448012 PRMT2P55345 433 aa13.33□□□□□ -0.28
NPIPB3-202ENST00000448012 MAP3K10Q02779 954 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms