RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MAP4K5Q9Y4K4 846 aa4.51□□□□□ -1.69
PMS1-215ENST00000447232 RTL9Q8NET4 1388 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 MAGEB6P1A0A0J9YX57 407 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 TCERG1O14776 1098 aaKnown RBP4.5□□□□□ -1.69
PMS1-215ENST00000447232 INSM1Q01101 510 aaPredicted RBP4.5□□□□□ -1.69
PMS1-215ENST00000447232 PTPN12Q05209 780 aaKnown RBP4.5□□□□□ -1.69
PMS1-215ENST00000447232 MTFR1Q15390 333 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 LDLRAD1Q5T700 205 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 PPP2R2DQ66LE6 453 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 TDHQ8IZJ6 230 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 GPKOWQ92917 476 aaPredicted RBP eCLIP4.5□□□□□ -1.69
PMS1-215ENST00000447232 RBM17Q96I25 401 aaKnown RBP4.5□□□□□ -1.69
PMS1-215ENST00000447232 NCOR1O75376 2440 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 FAM177BA6PVY3 158 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 SOBPA7XYQ1 873 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 H3BM21 787 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 ZNF280AP59817 542 aaPredicted RBP4.5□□□□□ -1.69
PMS1-215ENST00000447232 NPM2Q86SE8 214 aaKnown RBP4.5□□□□□ -1.69
PMS1-215ENST00000447232 DDRGK1Q96HY6 314 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 CARD14Q9BXL6 1004 aa4.5□□□□□ -1.69
PMS1-215ENST00000447232 SIPA1L3O60292 1781 aaPredicted RBP4.5□□□□□ -1.69
PMS1-215ENST00000447232 IBTKQ9P2D0 1353 aaPredicted RBP4.49□□□□□ -1.69
PMS1-215ENST00000447232 DDX60Q8IY21 1712 aaKnown RBP4.49□□□□□ -1.69
PMS1-215ENST00000447232 SCN9AQ15858 1988 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 GJB1P08034 283 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 FSHRP23945 695 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 GTF2E1P29083 439 aaPredicted RBP4.49□□□□□ -1.69
PMS1-215ENST00000447232 TCIRG1Q13488 830 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 PDXDC2PQ6P474 469 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 DPP8Q6V1X1 898 aaPredicted RBP4.49□□□□□ -1.69
PMS1-215ENST00000447232 VASH1Q7L8A9 365 aaPredicted RBP4.49□□□□□ -1.69
PMS1-215ENST00000447232 MAFAQ8NHW3 353 aaPredicted RBP4.49□□□□□ -1.69
PMS1-215ENST00000447232 CARD11Q9BXL7 1154 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 LRRC37AA6NMS7 1700 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 ZSWIM8A7E2V4 1837 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 IRS2Q9Y4H2 1338 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 BDP1A6H8Y1 2624 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 FARP2O94887 1054 aaPredicted RBP4.49□□□□□ -1.69
PMS1-215ENST00000447232 ZBTB48P10074 688 aaPredicted RBP4.49□□□□□ -1.69
PMS1-215ENST00000447232 GMPRP36959 345 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 ARHGEF6Q15052 776 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 NR6A1Q15406 480 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 HLFQ16534 295 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 ZNF790Q6PG37 636 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 SP8Q8IXZ3 490 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 TTC5Q8N0Z6 440 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 IRF7Q92985 503 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 NYXQ9GZU5 481 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 STK17AQ9UEE5 414 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 FKBPLQ9UIM3 349 aa4.49□□□□□ -1.69
PMS1-215ENST00000447232 ABCC4O15439 1325 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 VIL1P09327 827 aaKnown RBP4.48□□□□□ -1.69
PMS1-215ENST00000447232 TNNT2P45379 298 aaPredicted RBP4.48□□□□□ -1.69
PMS1-215ENST00000447232 C6orf118Q5T5N4 469 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 PRAMEF18Q5VWM3 479 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 PTPN18Q99952 460 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 TMX4Q9H1E5 349 aaPredicted RBP4.48□□□□□ -1.69
PMS1-215ENST00000447232 KCNQ5Q9NR82 932 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 CDH23Q9H251 3354 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 NUP98P52948 1817 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 PIP4K2AP48426 406 aaPredicted RBP4.48□□□□□ -1.69
PMS1-215ENST00000447232 MEIOBQ8N635 442 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 CDX2Q99626 313 aaPredicted RBP4.48□□□□□ -1.69
PMS1-215ENST00000447232 OCSTAMPQ9BR26 566 aa4.48□□□□□ -1.69
PMS1-215ENST00000447232 SCAF8Q9UPN6 1271 aaKnown RBP4.48□□□□□ -1.69
PMS1-215ENST00000447232 PSME4Q14997 1843 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 BBOX1O75936 387 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
PMS1-215ENST00000447232 MAGEA10P43363 369 aaPredicted RBP4.47□□□□□ -1.69
PMS1-215ENST00000447232 SULT6B1Q6IMI4 303 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 CCDC116Q8IYX3 515 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 LINC00528Q8N1L1 170 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 WNK4Q96J92 1243 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 DBNDD1Q9H9R9 158 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 USP16Q9Y5T5 823 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 ANKRD36CQ5JPF3 1778 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 MUC6Q6W4X9 2439 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 SLC24A1O60721 1099 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 GNRH1P01148 92 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 BMP2P12643 396 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 PRMT2P55345 433 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 MAP3K11Q16584 847 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 OTUD7BQ6GQQ9 843 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 ARMC9Q7Z3E5 817 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 EPS8L1Q8TE68 723 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 U2AF1L4Q8WU68 220 aaKnown RBP4.47□□□□□ -1.69
PMS1-215ENST00000447232 FAM161BQ96MY7 647 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 FMNL2Q96PY5 1086 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 ARHGAP9Q9BRR9 750 aa4.47□□□□□ -1.69
PMS1-215ENST00000447232 UBN2Q6ZU65 1347 aa4.46□□□□□ -1.69
PMS1-215ENST00000447232 LAMB2P55268 1798 aa4.46□□□□□ -1.69
PMS1-215ENST00000447232 ECE2O60344 883 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 MAN1A2O60476 641 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 AP1G2O75843 785 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 UPP2O95045 317 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 CCL5P13501 91 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 NF2P35240 595 aa4.46□□□□□ -1.7
PMS1-215ENST00000447232 NBPF10Q6P3W6 841 aaKnown RBP4.46□□□□□ -1.7
PMS1-215ENST00000447232 ALYREFQ86V81 257 aaKnown RBP4.46□□□□□ -1.7
PMS1-215ENST00000447232 GMLQ99445 158 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms