RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 PZPP20742 1482 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 LIN9Q5TKA1 542 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 TAF3Q5VWG9 929 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 GOLGA5Q8TBA6 731 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPN3-204ENST00000446349 V9GYY5 206 aaPredicted RBP9.6□□□□□ -0.87
PTPN3-204ENST00000446349 CTSWP56202 376 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 CCDC17Q96LX7 622 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 IQSEC3Q9UPP2 1182 aaPredicted RBP9.6□□□□□ -0.87
PTPN3-204ENST00000446349 MRPL11Q9Y3B7 192 aaKnown RBP9.6□□□□□ -0.87
PTPN3-204ENST00000446349 ZEB2O60315 1214 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 NSMCE1Q8WV22 266 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 CHL1O00533 1208 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 NUP58Q9BVL2 599 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
PTPN3-204ENST00000446349 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
PTPN3-204ENST00000446349 JADE2Q9NQC1 790 aa9.6□□□□□ -0.87
PTPN3-204ENST00000446349 GNA14O95837 355 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 FAM193AP78312 1265 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 ZBTB38Q8NAP3 1195 aaPredicted RBP9.59□□□□□ -0.87
PTPN3-204ENST00000446349 AATKQ6ZMQ8 1374 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 SAMD9LQ8IVG5 1584 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 BBOX1O75936 387 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 ADCY7P51828 1080 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 TUBB2AQ13885 445 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 TUBB2BQ9BVA1 445 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 XAGE2Q96GT9 111 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 ALDH3A1P30838 453 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 IL6STP40189 918 aaPredicted RBP9.59□□□□□ -0.87
PTPN3-204ENST00000446349 KBTBD3Q8NAB2 608 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.59□□□□□ -0.87
PTPN3-204ENST00000446349 ADCY10Q96PN6 1610 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 TESK2Q96S53 571 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 USP14P54578 494 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 SNW1Q13573 536 aaKnown RBP9.59□□□□□ -0.87
PTPN3-204ENST00000446349 CNGA4Q8IV77 575 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 FAM89AQ96GI7 184 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 ORAI2Q96SN7 254 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 ATP8A2Q9NTI2 1148 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 TTC37Q6PGP7 1564 aa9.59□□□□□ -0.87
PTPN3-204ENST00000446349 HSF2BPO75031 334 aa9.59□□□□□ -0.88
PTPN3-204ENST00000446349 C2CD5Q86YS7 1000 aa9.59□□□□□ -0.88
PTPN3-204ENST00000446349 MIGA1Q8NAN2 632 aa9.59□□□□□ -0.88
PTPN3-204ENST00000446349 SPATA5Q8NB90 893 aa9.59□□□□□ -0.88
PTPN3-204ENST00000446349 NBPF3Q9H094 633 aa9.59□□□□□ -0.88
PTPN3-204ENST00000446349 DNM3Q9UQ16 869 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 ZMYM4Q5VZL5 1548 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 CCT6AP40227 531 aaKnown RBP9.58□□□□□ -0.88
PTPN3-204ENST00000446349 CROCCP2Q86T23 111 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 ADGRL3Q9HAR2 1447 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 OSBPP22059 807 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 TMOD1P28289 359 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 ARMC9Q7Z3E5 817 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 SLFN12Q8IYM2 578 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 CCDC42Q96M95 316 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
PTPN3-204ENST00000446349 ODF2LQ9ULJ1 636 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 ESPNB1AK53 854 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 CWF19L2Q2TBE0 894 aaKnown RBP9.58□□□□□ -0.88
PTPN3-204ENST00000446349 MTRF1LQ9UGC7 380 aaKnown RBP9.58□□□□□ -0.88
PTPN3-204ENST00000446349 KDRP35968 1356 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 A0A1W2PRG0 241 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 F13A1P00488 732 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 ODR4Q5SWX8 454 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 FAM200AQ8TCP9 573 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 DSCC1Q9BVC3 393 aa9.58□□□□□ -0.88
PTPN3-204ENST00000446349 XPOTO43592 962 aaKnown RBP9.57□□□□□ -0.88
PTPN3-204ENST00000446349 XDHP47989 1333 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 GOLGA6CA6NDK9 693 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 GOLGA6BA6NDN3 693 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 GOLGA6DP0CG33 693 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 ATF7P17544 494 aaPredicted RBP9.57□□□□□ -0.88
PTPN3-204ENST00000446349 AFMP43652 599 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 CFAP58Q5T655 872 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 RSPH3Q86UC2 560 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 GOLGA6AQ9NYA3 693 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 ATP5DP30049 168 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 MCM7P33993 719 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 GPR161Q8N6U8 529 aaKnown RBP9.57□□□□□ -0.88
PTPN3-204ENST00000446349 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 CETN3O15182 167 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 PCCAP05165 728 aaPredicted RBP9.57□□□□□ -0.88
PTPN3-204ENST00000446349 TTLL7Q6ZT98 887 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 ZBTB40Q9NUA8 1239 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 CTAGE9A4FU28 777 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 BCRP11274 1271 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 NONOQ15233 471 aaKnown RBP eCLIP9.57□□□□□ -0.88
PTPN3-204ENST00000446349 SLC4A8Q2Y0W8 1093 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 SMC5Q8IY18 1101 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 OTUD6BQ8N6M0 293 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 ATP6V0A2Q9Y487 856 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 TMEM94Q12767 1356 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 RNF123Q5XPI4 1314 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 PTPDC1A2A3K4 754 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 PHKG2P15735 406 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 ZNF408Q9H9D4 720 aa9.57□□□□□ -0.88
PTPN3-204ENST00000446349 GPAA1O43292 621 aa9.56□□□□□ -0.88
PTPN3-204ENST00000446349 GSTA5Q7RTV2 222 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms