RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NAP1L3Q99457 506 aaPredicted RBP8.8□□□□□ -1
SMG1-202ENST00000446231 HINFPQ9BQA5 517 aa8.8□□□□□ -1
SMG1-202ENST00000446231 KLC4Q9NSK0 619 aa8.8□□□□□ -1
SMG1-202ENST00000446231 RGS16O15492 202 aaPredicted RBP8.8□□□□□ -1
SMG1-202ENST00000446231 PLA2G4AP47712 749 aa8.8□□□□□ -1
SMG1-202ENST00000446231 PEG3Q9GZU2 1588 aa8.8□□□□□ -1
SMG1-202ENST00000446231 DENND2CQ68D51 928 aa8.8□□□□□ -1
SMG1-202ENST00000446231 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
SMG1-202ENST00000446231 DDX12PQ92771 950 aa8.8□□□□□ -1
SMG1-202ENST00000446231 PLCB1Q9NQ66 1216 aa8.8□□□□□ -1
SMG1-202ENST00000446231 LRRD1A4D1F6 860 aa8.8□□□□□ -1
SMG1-202ENST00000446231 CNOT10Q9H9A5 744 aaKnown RBP8.8□□□□□ -1
SMG1-202ENST00000446231 PPP1R12BO60237 982 aaPredicted RBP8.8□□□□□ -1
SMG1-202ENST00000446231 TRMT44Q8IYL2 757 aaKnown RBP8.8□□□□□ -1
SMG1-202ENST00000446231 MYD88Q99836 296 aa8.8□□□□□ -1
SMG1-202ENST00000446231 EPC1Q9H2F5 836 aa8.8□□□□□ -1
SMG1-202ENST00000446231 RPS6KA1Q15418 735 aa8.8□□□□□ -1
SMG1-202ENST00000446231 PFKFB2O60825 505 aa8.8□□□□□ -1
SMG1-202ENST00000446231 DDX27Q96GQ7 796 aaKnown RBP8.8□□□□□ -1
SMG1-202ENST00000446231 RGS12O14924 1447 aa8.8□□□□□ -1
SMG1-202ENST00000446231 RAD21O60216 631 aa8.8□□□□□ -1
SMG1-202ENST00000446231 DDX46Q7L014 1031 aaKnown RBP8.8□□□□□ -1
SMG1-202ENST00000446231 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
SMG1-202ENST00000446231 SEPT14Q6ZU15 432 aa8.8□□□□□ -1
SMG1-202ENST00000446231 SSH2Q76I76 1423 aa8.8□□□□□ -1
SMG1-202ENST00000446231 ZNF131P52739 623 aa8.8□□□□□ -1
SMG1-202ENST00000446231 PA2G4Q9UQ80 394 aaKnown RBP8.8□□□□□ -1
SMG1-202ENST00000446231 RTEL1-TNFRSF6BF6WH68 1400 aa8.8□□□□□ -1
SMG1-202ENST00000446231 SYNRGQ9UMZ2 1314 aa8.8□□□□□ -1
SMG1-202ENST00000446231 TEX14Q8IWB6 1497 aa8.8□□□□□ -1
SMG1-202ENST00000446231 MORC3Q14149 939 aa8.79□□□□□ -1
SMG1-202ENST00000446231 RAPGEF4Q8WZA2 1011 aa8.79□□□□□ -1
SMG1-202ENST00000446231 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.79□□□□□ -11e-6■■■□□ 17.7
SMG1-202ENST00000446231 CCDC25Q86WR0 208 aa8.79□□□□□ -1
SMG1-202ENST00000446231 TSC22D3Q99576 134 aa8.79□□□□□ -1
SMG1-202ENST00000446231 CWC25Q9NXE8 425 aaPredicted RBP8.79□□□□□ -1
SMG1-202ENST00000446231 PRPHP41219 470 aa8.79□□□□□ -1
SMG1-202ENST00000446231 POLKQ9UBT6 870 aa8.79□□□□□ -1
SMG1-202ENST00000446231 IFIT1P09914 478 aaKnown RBP8.79□□□□□ -1
SMG1-202ENST00000446231 LRRC27Q9C0I9 530 aa8.79□□□□□ -1
SMG1-202ENST00000446231 GCFC2P16383 781 aaKnown RBP8.79□□□□□ -1
SMG1-202ENST00000446231 G2E3Q7L622 706 aa8.79□□□□□ -1
SMG1-202ENST00000446231 BPIFA3Q9BQP9 254 aa8.79□□□□□ -1
SMG1-202ENST00000446231 MMRN2Q9H8L6 949 aa8.79□□□□□ -1
SMG1-202ENST00000446231 RASSF2P50749 326 aa8.79□□□□□ -1
SMG1-202ENST00000446231 TDRD12Q587J7 1177 aaKnown RBP8.79□□□□□ -1
SMG1-202ENST00000446231 KRT23Q9C075 422 aa8.79□□□□□ -1
SMG1-202ENST00000446231 IKBKGQ9Y6K9 419 aa8.79□□□□□ -1
SMG1-202ENST00000446231 CEP104O60308 925 aa8.79□□□□□ -1
SMG1-202ENST00000446231 SNAPC4Q5SXM2 1469 aa8.79□□□□□ -1
SMG1-202ENST00000446231 GNPTABQ3T906 1256 aa8.79□□□□□ -1
SMG1-202ENST00000446231 METTL24Q5JXM2 366 aa8.79□□□□□ -1
SMG1-202ENST00000446231 USH1CQ9Y6N9 552 aa8.79□□□□□ -1
SMG1-202ENST00000446231 SUN1O94901 812 aa8.79□□□□□ -1
SMG1-202ENST00000446231 MYO1EQ12965 1108 aa8.79□□□□□ -1
SMG1-202ENST00000446231 SF3B2Q13435 895 aaKnown RBP8.79□□□□□ -1
SMG1-202ENST00000446231 LRRC23Q53EV4 343 aaPredicted RBP8.79□□□□□ -1
SMG1-202ENST00000446231 VSIG1Q86XK7 387 aa8.79□□□□□ -1
SMG1-202ENST00000446231 HVCN1Q96D96 273 aa8.79□□□□□ -1
SMG1-202ENST00000446231 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.79□□□□□ -12e-6■■■■■ 70.3
SMG1-202ENST00000446231 RAB3IL1Q8TBN0 382 aa8.79□□□□□ -1
SMG1-202ENST00000446231 TCP11Q8WWU5 503 aa8.79□□□□□ -1
SMG1-202ENST00000446231 NUDT16Q96DE0 195 aaKnown RBP8.79□□□□□ -1
SMG1-202ENST00000446231 SH3GL3Q99963 347 aa8.79□□□□□ -1
SMG1-202ENST00000446231 CHPF2Q9P2E5 772 aa8.79□□□□□ -1
SMG1-202ENST00000446231 PPP1R12AO14974 1030 aaPredicted RBP8.79□□□□□ -1
SMG1-202ENST00000446231 CETN3O15182 167 aa8.79□□□□□ -1
SMG1-202ENST00000446231 H2AFXP16104 143 aaPredicted RBP8.79□□□□□ -1
SMG1-202ENST00000446231 MAGEA1P43355 309 aa8.79□□□□□ -1
SMG1-202ENST00000446231 ZNF174Q15697 407 aa8.79□□□□□ -1
SMG1-202ENST00000446231 PHLDB2Q86SQ0 1253 aa8.79□□□□□ -1
SMG1-202ENST00000446231 CROCCP2Q86T23 111 aa8.79□□□□□ -1
SMG1-202ENST00000446231 ENO4A6NNW6 628 aa8.79□□□□□ -1
SMG1-202ENST00000446231 IKBKBO14920 756 aa8.79□□□□□ -1
SMG1-202ENST00000446231 TMEM266Q2M3C6 531 aa8.79□□□□□ -1
SMG1-202ENST00000446231 URB1O60287 2271 aaKnown RBP8.78□□□□□ -1
SMG1-202ENST00000446231 KCNJ18B7U540 433 aa8.78□□□□□ -1
SMG1-202ENST00000446231 KCNJ12Q14500 433 aa8.78□□□□□ -1
SMG1-202ENST00000446231 DHX40Q8IX18 779 aaKnown RBP8.78□□□□□ -1
SMG1-202ENST00000446231 PSMB7Q99436 277 aa8.78□□□□□ -1
SMG1-202ENST00000446231 SPATA1Q5VX52 437 aa8.78□□□□□ -1
SMG1-202ENST00000446231 VPS52Q8N1B4 723 aa8.78□□□□□ -1
SMG1-202ENST00000446231 PPP1R14CQ8TAE6 165 aa8.78□□□□□ -1
SMG1-202ENST00000446231 KLHL14Q9P2G3 628 aa8.78□□□□□ -1
SMG1-202ENST00000446231 LARSQ9P2J5 1176 aaKnown RBP8.78□□□□□ -1
SMG1-202ENST00000446231 POTEJP0CG39 1038 aa8.78□□□□□ -1
SMG1-202ENST00000446231 SH3BGRP55822 239 aaPredicted RBP8.78□□□□□ -1
SMG1-202ENST00000446231 SPTY2D1Q68D10 685 aaPredicted RBP8.78□□□□□ -1
SMG1-202ENST00000446231 SPAG5Q96R06 1193 aa8.78□□□□□ -1
SMG1-202ENST00000446231 SEC63Q9UGP8 760 aaKnown RBP8.78□□□□□ -1
SMG1-202ENST00000446231 FLOT1O75955 427 aa8.78□□□□□ -1
SMG1-202ENST00000446231 TXLNGQ9NUQ3 528 aa8.78□□□□□ -1
SMG1-202ENST00000446231 MUM1Q2TAK8 710 aa8.78□□□□□ -1
SMG1-202ENST00000446231 CCDC85AQ96PX6 553 aaPredicted RBP8.78□□□□□ -1
SMG1-202ENST00000446231 EMBQ6PCB8 327 aa8.78□□□□□ -1
SMG1-202ENST00000446231 WAPLQ7Z5K2 1190 aa8.78□□□□□ -1
SMG1-202ENST00000446231 TRIM6Q9C030 488 aaPredicted RBP8.78□□□□□ -1
SMG1-202ENST00000446231 ARHGEF12Q9NZN5 1544 aa8.78□□□□□ -1
SMG1-202ENST00000446231 ATP1A3P13637 1013 aa8.78□□□□□ -1
SMG1-202ENST00000446231 GUCY2DQ02846 1103 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms