RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.21
ERCC3-203ENST00000445889 AKAP2Q9Y2D5 859 aa16.33■□□□□ 0.21
ERCC3-203ENST00000445889 ZMYM6O95789 1325 aa16.33■□□□□ 0.2
ERCC3-203ENST00000445889 SMIM22K7EJ46 135 aa16.33■□□□□ 0.2
ERCC3-203ENST00000445889 PRKAB2O43741 272 aa16.33■□□□□ 0.2
ERCC3-203ENST00000445889 CIAO1O76071 339 aa16.33■□□□□ 0.2
ERCC3-203ENST00000445889 HLFQ16534 295 aa16.33■□□□□ 0.2
ERCC3-203ENST00000445889 AFDNP55196 1824 aaKnown RBP16.33■□□□□ 0.2
ERCC3-203ENST00000445889 IFIT3O14879 490 aaKnown RBP16.32■□□□□ 0.2
ERCC3-203ENST00000445889 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-203ENST00000445889 ITGA6P23229 1130 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 ST5P78524 1137 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 RESP18Q5W5W9 173 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 TMEM139Q8IV31 216 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 STAMQ92783 540 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■■□□□ 14.2
ERCC3-203ENST00000445889 USP54Q70EL1 1684 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 TADA3O75528 432 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 TOB1P50616 345 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-203ENST00000445889 SMYD4Q8IYR2 804 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-203ENST00000445889 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
ERCC3-203ENST00000445889 NUP133Q8WUM0 1156 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 MED15Q96RN5 788 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 ARGLU1Q9NWB6 273 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-203ENST00000445889 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 PCDHB6Q9Y5E3 794 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 ABCC6O95255 1503 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 CASQ1P31415 396 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 ADD2P35612 726 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 AFMP43652 599 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 NTRK3Q16288 839 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 OXER1Q8TDS5 423 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-203ENST00000445889 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
ERCC3-203ENST00000445889 FAM205CA6NFA0 338 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 TEX33O43247 280 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 LRRFIP1Q32MZ4 808 aaKnown RBP16.31■□□□□ 0.2
ERCC3-203ENST00000445889 JMYQ8N9B5 988 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 ZFP91Q96JP5 570 aaPredicted RBP16.31■□□□□ 0.2
ERCC3-203ENST00000445889 TIGD1Q96MW7 591 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 PHLPP2Q6ZVD8 1323 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 SOWAHDA6NJG2 315 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 DNAJC10Q8IXB1 793 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 DIS3L2Q8IYB7 885 aaKnown RBP16.31■□□□□ 0.2
ERCC3-203ENST00000445889 AIDAQ96BJ3 306 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 ARMT1Q9H993 441 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
ERCC3-203ENST00000445889 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
ERCC3-203ENST00000445889 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
ERCC3-203ENST00000445889 TC2NQ8N9U0 490 aa16.3■□□□□ 0.2
ERCC3-203ENST00000445889 DHX58Q96C10 678 aa16.3■□□□□ 0.2
ERCC3-203ENST00000445889 C19orf44Q9H6X5 657 aa16.3■□□□□ 0.2
ERCC3-203ENST00000445889 LY9Q9HBG7 655 aa16.3■□□□□ 0.2
ERCC3-203ENST00000445889 PUF60Q9UHX1 559 aaKnown RBP16.3■□□□□ 0.2
ERCC3-203ENST00000445889 SIPA1L3O60292 1781 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-203ENST00000445889 PPP6R2O75170 966 aa16.3■□□□□ 0.2
ERCC3-203ENST00000445889 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2
ERCC3-203ENST00000445889 ATF3P18847 181 aa16.3■□□□□ 0.2
ERCC3-203ENST00000445889 HNRNPH2P55795 449 aaKnown RBP16.3■□□□□ 0.2
ERCC3-203ENST00000445889 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
ERCC3-203ENST00000445889 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.21e-6■□□□□ 10.8
ERCC3-203ENST00000445889 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
ERCC3-203ENST00000445889 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
ERCC3-203ENST00000445889 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-203ENST00000445889 SLIT3O75094 1523 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 PDE6AP16499 860 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-203ENST00000445889 POSTNQ15063 836 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 VGLL3A8MV65 326 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 CYP2C19P33261 490 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 KCNJ6P48051 423 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 SSRP1Q08945 709 aaKnown RBP16.29■□□□□ 0.2
ERCC3-203ENST00000445889 MIGA1Q8NAN2 632 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 ISCA1Q9BUE6 129 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 CABP5Q9NP86 173 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 RIPOR2Q9Y4F9 1068 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 CCP110O43303 1012 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 MDM2Q00987 491 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-203ENST00000445889 PPP2R3AQ06190 1150 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 MAGEB6Q8N7X4 407 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 CCDC12Q8WUD4 166 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-203ENST00000445889 EPB41L4AQ9HCS5 686 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-203ENST00000445889 CPDO75976 1380 aa16.29■□□□□ 0.2
ERCC3-203ENST00000445889 ARHGAP6O43182 974 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 ZSCAN12O43309 604 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 MBD4O95243 580 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 ABL1P00519 1130 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 PARD6BQ9BYG5 372 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 TMEM51Q9NW97 253 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 C1orf167Q5SNV9 1468 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 EFCAB8A8MWE9 144 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 CUTAO60888 179 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 CDKL5O76039 1030 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 TTLL11Q8NHH1 800 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 EPSTI1Q96J88 318 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms