RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 TBC1D22BQ9NU19 505 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 IRAK4Q9NWZ3 460 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 SEPT10Q9P0V9 454 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 PCDH10Q9P2E7 1040 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 TBK1Q9UHD2 729 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 GGT7Q9UJ14 662 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 CFAP45Q9UL16 551 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 PA2G4Q9UQ80 394 aaKnown RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 SPEF1Q9Y4P9 236 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 IPPQ9Y573 584 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 SQORQ9Y6N5 450 aa3.23□□□□□ -1.89
UBBP3-201ENST00000445497 MORC2Q9Y6X9 1032 aaPredicted RBP3.23□□□□□ -1.89
UBBP3-201ENST00000445497 WASHC2CQ9Y4E1 1318 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 CASQ2O14958 399 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ZBTB24O43167 697 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 KLF4O43474 513 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 SGTAO43765 313 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 TADA3O75528 432 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 SFTPCP11686 197 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ATP6V1B1P15313 513 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 STMN1P16949 149 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 TNFAIP3P21580 790 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ATP6V1E1P36543 226 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 USP8P40818 1118 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 GUCY2FP51841 1108 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 GJA9P57773 515 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ZNF280AP59817 542 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 GABREP78334 506 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 TMF1P82094 1093 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 EHHADHQ08426 723 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 DPYDQ12882 1025 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 CHAF1AQ13111 956 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 DSC3Q14574 896 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 PLCB4Q15147 1175 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 SYCP1Q15431 976 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 PDCD2Q16342 344 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ECM1Q16610 540 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 TKFCQ3LXA3 575 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ERFEQ4G0M1 354 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 C2orf27AQ580R0 203 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 DALRD3Q5D0E6 543 aaKnown RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 INTS11Q5TA45 600 aaKnown RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 AGAP9Q5VTM2 703 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 IL31Q6EBC2 164 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 C1orf228Q6PIY5 440 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 CCBE1Q6UXH8 406 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 CAPN12Q6ZSI9 719 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 NYAP1Q6ZVC0 841 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 BTN2A1Q7KYR7 527 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 MCM10Q7L590 875 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ZBTB46Q86UZ6 589 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 LRRC49Q8IUZ0 686 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 CEP57L1Q8IYX8 460 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 SPATA5Q8NB90 893 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 RASSF8Q8NHQ8 419 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 GABPB2Q8TAK5 448 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 JPH3Q8WXH2 748 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 TAF4BQ92750 862 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 NELL1Q92832 810 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 SH3KBP1Q96B97 665 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ALKBH8Q96BT7 664 aaKnown RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 NAF1Q96HR8 494 aaKnown RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 TNIP3Q96KP6 325 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 DNAJC7Q99615 494 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 TMEM106CQ9BVX2 250 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 RBSNQ9H1K0 784 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 CNNM2Q9H8M5 875 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 PLEKHA5Q9HAU0 1116 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ATP6V0A4Q9HBG4 840 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 NLRC4Q9NPP4 1024 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 TRPV5Q9NQA5 729 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 QPCTLQ9NXS2 382 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 NKIRAS2Q9NYR9 191 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 AIPL1Q9NZN9 384 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 PPARGC1AQ9UBK2 798 aaKnown RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 CLIP2Q9UDT6 1046 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 GTF2IRD1Q9UHL9 959 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 PPP1R9AQ9ULJ8 1098 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 AGTPBP1Q9UPW5 1226 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 ATP6V0A2Q9Y487 856 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 MAGED1Q9Y5V3 778 aaPredicted RBP3.22□□□□□ -1.89
UBBP3-201ENST00000445497 GPRASP1Q5JY77 1395 aa3.22□□□□□ -1.89
UBBP3-201ENST00000445497 KIF16BQ96L93 1317 aa3.21□□□□□ -1.89
UBBP3-201ENST00000445497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 CCDC196A0A1B0GTZ2 297 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 ANKRD18BA2A2Z9 1011 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 FAM221BA6H8Z2 402 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 A6NCN8 305 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 C2orf81A6NN90 581 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 TOR1BO14657 336 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 MUSKO15146 869 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 AKR1B10O60218 316 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 PIP5K1CO60331 668 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 NBNO60934 754 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 RHOXF2BP0C7M4 288 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 EEF2P13639 858 aaKnown RBP3.21□□□□□ -1.9
UBBP3-201ENST00000445497 KRT10P13645 584 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 P4HA1P13674 534 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 FERP16591 822 aa3.21□□□□□ -1.9
UBBP3-201ENST00000445497 NPR3P17342 541 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms