RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 ECEL1O95672 775 aa6.96□□□□□ -1.3
LINC01004-201ENST00000445184 MZF1P28698 734 aaPredicted RBP6.96□□□□□ -1.3
LINC01004-201ENST00000445184 B4GALNT3Q6L9W6 998 aa6.96□□□□□ -1.3
LINC01004-201ENST00000445184 WDR18Q9BV38 432 aa6.96□□□□□ -1.3
LINC01004-201ENST00000445184 PIDD1Q9HB75 910 aa6.96□□□□□ -1.3
LINC01004-201ENST00000445184 LATS2Q9NRM7 1088 aa6.96□□□□□ -1.3
LINC01004-201ENST00000445184 NPIPB6E9PJ23 425 aa6.95□□□□□ -1.3
LINC01004-201ENST00000445184 TNFRSF21O75509 655 aa6.95□□□□□ -1.3
LINC01004-201ENST00000445184 SSFA2P28290 1259 aa6.95□□□□□ -1.3
LINC01004-201ENST00000445184 ZP2Q05996 745 aa6.95□□□□□ -1.3
LINC01004-201ENST00000445184 PDE3AQ14432 1141 aa6.95□□□□□ -1.3
LINC01004-201ENST00000445184 FYB2Q5VWT5 728 aa6.95□□□□□ -1.3
LINC01004-201ENST00000445184 FBXO15Q8NCQ5 510 aaPredicted RBP6.95□□□□□ -1.3
LINC01004-201ENST00000445184 SNX29Q8TEQ0 813 aa6.95□□□□□ -1.3
LINC01004-201ENST00000445184 ASB11Q8WXH4 323 aa6.95□□□□□ -1.3
LINC01004-201ENST00000445184 CLP1Q92989 425 aaKnown RBP6.95□□□□□ -1.3
LINC01004-201ENST00000445184 NOM1Q5C9Z4 860 aaKnown RBP6.94□□□□□ -1.3
LINC01004-201ENST00000445184 TRIM56Q9BRZ2 755 aaKnown RBP6.94□□□□□ -1.3
LINC01004-201ENST00000445184 TNKS2Q9H2K2 1166 aa6.94□□□□□ -1.3
LINC01004-201ENST00000445184 TMPRSS2O15393 492 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 LEFTY1O75610 366 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 TMEM253P0C7T8 217 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 IKZF1Q13422 519 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 CCDC27Q2M243 656 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 TMEM67Q5HYA8 995 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 CIAPIN1Q6FI81 312 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 SMYD4Q8IYR2 804 aaPredicted RBP6.93□□□□□ -1.3
LINC01004-201ENST00000445184 KIRREL1Q96J84 757 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 CSRNP1Q96S65 589 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 DUSP23Q9BVJ7 150 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 ATXN3LQ9H3M9 355 aa6.93□□□□□ -1.3
LINC01004-201ENST00000445184 ITIH2P19823 946 aa6.92□□□□□ -1.3
LINC01004-201ENST00000445184 KCNA10Q16322 511 aa6.92□□□□□ -1.3
LINC01004-201ENST00000445184 RELTQ969Z4 430 aa6.92□□□□□ -1.3
LINC01004-201ENST00000445184 HOXA5P20719 270 aa6.91□□□□□ -1.3
LINC01004-201ENST00000445184 SPRED3Q2MJR0 410 aa6.91□□□□□ -1.3
LINC01004-201ENST00000445184 CCNJLQ8IV13 435 aa6.91□□□□□ -1.3
LINC01004-201ENST00000445184 ZNF428Q96B54 188 aa6.91□□□□□ -1.3
LINC01004-201ENST00000445184 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
LINC01004-201ENST00000445184 SEPT3Q9UH03 358 aa6.91□□□□□ -1.3
LINC01004-201ENST00000445184 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
LINC01004-201ENST00000445184 B3GALT4O96024 378 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 SLFN14P0C7P3 912 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 GRIA4P48058 902 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 EHHADHQ08426 723 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 DNAJC14Q6Y2X3 702 aaPredicted RBP6.9□□□□□ -1.3
LINC01004-201ENST00000445184 DBX2Q6ZNG2 339 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 CYFIP1Q7L576 1253 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 NSUN3Q9H649 340 aaKnown RBP6.9□□□□□ -1.3
LINC01004-201ENST00000445184 CD320Q9NPF0 282 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 PCOLCE2Q9UKZ9 415 aa6.9□□□□□ -1.3
LINC01004-201ENST00000445184 ATG14Q6ZNE5 492 aa6.89□□□□□ -1.31
LINC01004-201ENST00000445184 HELQQ8TDG4 1101 aa6.89□□□□□ -1.31
LINC01004-201ENST00000445184 DIRC2Q96SL1 478 aa6.89□□□□□ -1.31
LINC01004-201ENST00000445184 TCAF2A6NFQ2 919 aa6.88□□□□□ -1.31
LINC01004-201ENST00000445184 RNGTTO60942 597 aaKnown RBP6.88□□□□□ -1.31
LINC01004-201ENST00000445184 LIG1P18858 919 aa6.88□□□□□ -1.31
LINC01004-201ENST00000445184 EIF1AXP47813 144 aaKnown RBP6.88□□□□□ -1.31
LINC01004-201ENST00000445184 ID3Q02535 119 aa6.88□□□□□ -1.31
LINC01004-201ENST00000445184 AP3B2Q13367 1082 aa6.88□□□□□ -1.31
LINC01004-201ENST00000445184 LIN7BQ9HAP6 207 aa6.88□□□□□ -1.31
LINC01004-201ENST00000445184 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
LINC01004-201ENST00000445184 POLIQ9UNA4 740 aa6.88□□□□□ -1.31
LINC01004-201ENST00000445184 RBM47A0AV96 593 aaKnown RBP6.87□□□□□ -1.31
LINC01004-201ENST00000445184 ALKBH2Q6NS38 261 aa6.87□□□□□ -1.31
LINC01004-201ENST00000445184 TOP6BLQ8N6T0 577 aa6.87□□□□□ -1.31
LINC01004-201ENST00000445184 TCF12Q99081 682 aa6.87□□□□□ -1.31
LINC01004-201ENST00000445184 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
LINC01004-201ENST00000445184 ZFYVE28Q9HCC9 887 aa6.87□□□□□ -1.31
LINC01004-201ENST00000445184 DISC1Q9NRI5 854 aa6.87□□□□□ -1.31
LINC01004-201ENST00000445184 A0A1W2PP55 124 aa6.86□□□□□ -1.31
LINC01004-201ENST00000445184 MED14OSP0DP75 135 aa6.86□□□□□ -1.31
LINC01004-201ENST00000445184 TTLL4Q14679 1199 aa6.86□□□□□ -1.31
LINC01004-201ENST00000445184 WDR89Q96FK6 387 aaPredicted RBP6.86□□□□□ -1.31
LINC01004-201ENST00000445184 HEXIM2Q96MH2 286 aaKnown RBP6.86□□□□□ -1.31
LINC01004-201ENST00000445184 GTF2IRD1Q9UHL9 959 aa6.86□□□□□ -1.31
LINC01004-201ENST00000445184 SOWAHDA6NJG2 315 aa6.85□□□□□ -1.31
LINC01004-201ENST00000445184 NUAK1O60285 661 aa6.85□□□□□ -1.31
LINC01004-201ENST00000445184 ERCC3P19447 782 aa6.85□□□□□ -1.31
LINC01004-201ENST00000445184 USP5P45974 858 aa6.85□□□□□ -1.31
LINC01004-201ENST00000445184 DCP1AQ9NPI6 582 aaPredicted RBP6.85□□□□□ -1.31
LINC01004-201ENST00000445184 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
LINC01004-201ENST00000445184 FOXD2O60548 495 aaPredicted RBP6.84□□□□□ -1.31
LINC01004-201ENST00000445184 POLR3DP05423 398 aaPredicted RBP6.84□□□□□ -1.31
LINC01004-201ENST00000445184 HCLS1P14317 486 aaPredicted RBP6.84□□□□□ -1.31
LINC01004-201ENST00000445184 GLDCP23378 1020 aa6.84□□□□□ -1.31
LINC01004-201ENST00000445184 MPSTP25325 297 aa6.84□□□□□ -1.31
LINC01004-201ENST00000445184 GDNFP39905 211 aa6.84□□□□□ -1.31
LINC01004-201ENST00000445184 HNRNPUQ00839 825 aaKnown RBP eCLIP6.84□□□□□ -1.31
LINC01004-201ENST00000445184 SPACA3Q8IXA5 215 aa6.84□□□□□ -1.31
LINC01004-201ENST00000445184 EPB41L4BQ9H329 900 aa6.84□□□□□ -1.31
LINC01004-201ENST00000445184 ZNF576Q9H609 170 aa6.84□□□□□ -1.31
LINC01004-201ENST00000445184 PARD6AQ9NPB6 346 aa6.84□□□□□ -1.31
LINC01004-201ENST00000445184 SMG5Q9UPR3 1016 aaKnown RBP6.84□□□□□ -1.31
LINC01004-201ENST00000445184 ATP2B4P23634 1241 aa6.83□□□□□ -1.32
LINC01004-201ENST00000445184 RBM25P49756 843 aaKnown RBP6.83□□□□□ -1.32
LINC01004-201ENST00000445184 AAMPQ13685 434 aa6.83□□□□□ -1.32
LINC01004-201ENST00000445184 CCDC86Q9H6F5 360 aaKnown RBP6.83□□□□□ -1.32
LINC01004-201ENST00000445184 SSU72Q9NP77 194 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 287 ms