RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 KLRK1P26718 216 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 MDM2Q00987 491 aaPredicted RBP11.49□□□□□ -0.57
LINC00642-203ENST00000444942 VGLL4Q14135 290 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 DLGAP5Q15398 846 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 RABL6Q3YEC7 729 aaPredicted RBP11.49□□□□□ -0.57
LINC00642-203ENST00000444942 USP38Q8NB14 1042 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 MTMR14Q8NCE2 650 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 ADAMTS19Q8TE59 1207 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 SIL1Q9H173 461 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 TTYH1Q9H313 450 aaPredicted RBP11.49□□□□□ -0.57
LINC00642-203ENST00000444942 GABRQQ9UN88 632 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 COG6Q9Y2V7 657 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 ARAP2Q8WZ64 1704 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 C20orf194Q5TEA3 1177 aa11.48□□□□□ -0.57
LINC00642-203ENST00000444942 C11orf49Q9H6J7 331 aa11.48□□□□□ -0.57
LINC00642-203ENST00000444942 PA2G4Q9UQ80 394 aaKnown RBP11.48□□□□□ -0.57
LINC00642-203ENST00000444942 SPDYE5A6NIY4 337 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 GNAI2P04899 355 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 FCGRTP55899 365 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 MAP3K9P80192 1104 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 RASA3Q14644 834 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 METTL24Q5JXM2 366 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 ATXN2LQ8WWM7 1075 aaKnown RBP11.47□□□□□ -0.57
LINC00642-203ENST00000444942 CRBNQ96SW2 442 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 UHRF1Q96T88 793 aaPredicted RBP11.47□□□□□ -0.57
LINC00642-203ENST00000444942 ANKRD2Q9GZV1 360 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 LTBP2Q14767 1821 aa11.47□□□□□ -0.57
LINC00642-203ENST00000444942 CLRN2A0PK11 232 aa11.46□□□□□ -0.57
LINC00642-203ENST00000444942 SNAPC2Q13487 334 aa11.46□□□□□ -0.57
LINC00642-203ENST00000444942 TTLL5Q6EMB2 1281 aa11.46□□□□□ -0.57
LINC00642-203ENST00000444942 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
LINC00642-203ENST00000444942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00642-203ENST00000444942 COA1Q9GZY4 146 aa11.46□□□□□ -0.57
LINC00642-203ENST00000444942 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00642-203ENST00000444942 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
LINC00642-203ENST00000444942 PCDHAC2Q9Y5I4 1007 aa11.46□□□□□ -0.57
LINC00642-203ENST00000444942 CSADQ9Y600 493 aa11.46□□□□□ -0.57
LINC00642-203ENST00000444942 TCF20Q9UGU0 1960 aaKnown RBP11.46□□□□□ -0.58
LINC00642-203ENST00000444942 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 SRGAP3O43295 1099 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 MYO1BO43795 1136 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 RFX5P48382 616 aaPredicted RBP11.45□□□□□ -0.58
LINC00642-203ENST00000444942 FLT3LGP49771 235 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 IRF5Q13568 498 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 ASB2Q96Q27 587 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 P2RX7Q99572 595 aaKnown RBP11.45□□□□□ -0.58
LINC00642-203ENST00000444942 LRFN3Q9BTN0 628 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 VEZTQ9HBM0 779 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 LEMD3Q9Y2U8 911 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 MAST2Q6P0Q8 1798 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 PFASO15067 1338 aa11.45□□□□□ -0.58
LINC00642-203ENST00000444942 PNMA6EA0A0J9YXQ4 647 aa11.44□□□□□ -0.58
LINC00642-203ENST00000444942 SPDYE2BA6NHP3 402 aa11.44□□□□□ -0.58
LINC00642-203ENST00000444942 IRF6O14896 467 aa11.44□□□□□ -0.58
LINC00642-203ENST00000444942 SPDYE6P0CI01 402 aa11.44□□□□□ -0.58
LINC00642-203ENST00000444942 MS4A1P11836 297 aa11.44□□□□□ -0.58
LINC00642-203ENST00000444942 ANKRD23Q86SG2 305 aa11.44□□□□□ -0.58
LINC00642-203ENST00000444942 ERO1BQ86YB8 467 aa11.44□□□□□ -0.58
LINC00642-203ENST00000444942 MYH13Q9UKX3 1938 aa11.44□□□□□ -0.58
LINC00642-203ENST00000444942 EYA2O00167 538 aa11.43□□□□□ -0.58
LINC00642-203ENST00000444942 BCRP11274 1271 aa11.43□□□□□ -0.58
LINC00642-203ENST00000444942 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
LINC00642-203ENST00000444942 PRMT6Q96LA8 375 aaPredicted RBP11.43□□□□□ -0.58
LINC00642-203ENST00000444942 JAG2Q9Y219 1238 aa11.43□□□□□ -0.58
LINC00642-203ENST00000444942 AOX1Q06278 1338 aa11.43□□□□□ -0.58
LINC00642-203ENST00000444942 MROH5Q6ZUA9 1318 aa11.43□□□□□ -0.58
LINC00642-203ENST00000444942 PDHXO00330 501 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 GYG1P46976 350 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 SMAD3P84022 425 aaKnown RBP11.42□□□□□ -0.58
LINC00642-203ENST00000444942 PPIL2Q13356 520 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 ATG9AQ7Z3C6 839 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 TEPSINQ96N21 525 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
LINC00642-203ENST00000444942 BCL11AQ9H165 835 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 IQSEC3Q9UPP2 1182 aaPredicted RBP11.42□□□□□ -0.58
LINC00642-203ENST00000444942 SNCAIPQ9Y6H5 919 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 AK9Q5TCS8 1911 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 MYO9BQ13459 2157 aa11.42□□□□□ -0.58
LINC00642-203ENST00000444942 GTF2IP78347 998 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 TNFAIP1Q13829 316 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 PDE3AQ14432 1141 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 CDAN1Q8IWY9 1227 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 THEGQ9P2T0 379 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 OGDHLQ9ULD0 1010 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 PDE8BO95263 885 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 COL6A1P12109 1028 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 MRE11P49959 708 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 MRPS5P82675 430 aaKnown RBP11.41□□□□□ -0.58
LINC00642-203ENST00000444942 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 OS9Q13438 667 aaPredicted RBP11.41□□□□□ -0.58
LINC00642-203ENST00000444942 UBE4AQ14139 1066 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 ZNF804AQ7Z570 1209 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 CERS5Q8N5B7 392 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 VGLL2Q8N8G2 317 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 CD209Q9NNX6 404 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 COPRSQ9NQ92 184 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 CEP126Q9P2H0 1117 aa11.41□□□□□ -0.58
LINC00642-203ENST00000444942 DDX19BQ9UMR2 479 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms